DK962347 |
Clone id |
TST39A01NGRL0013_K01 |
Library |
TST39 |
Length |
608 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_K01. 5' end sequence. |
Accession |
DK962347 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCGGAGGAAATATGCCTACCTTTGTGGCTCTGCTATGTTTCAACTGCAACATGATGCAGG TGAAACATGCGAAGGAGTCCAGCAACAAGTGGACCTGCAGTCTGTGTAACGAGAAGCAGT CAGTTAGGAAGGTTTTTGCAACCTCCGTAGCTGCTAAAGACATCCGAAAGTTTGTCCAGG AGTACAACTTATCCCGCAATAGAGCACAGGACCGAGCTCTTGCAGAGTTGGTGGTCTATG TGGAAAAACAAGGAAATGATGATTTTGCCCATGATGATCATCTGTGTTGTAGTGAAAGTA GTCGAGCATGTCGTGACATCCTTTCTTATAATTGTAATTGCCAGGAGGTGATTGTGGGAA GCAAATGGGATGAATACCTCCCTCAGGACGACGGAGTCTATTCTGAAGTTGCAGAATATG TTACGCATGATGCTGAATTTGTGACAGTCGTTCCTGAAACACATGCCAGAATATCAAAAG GTAGAATTCCAAGTGCATCTAATAAGGCCACCTCACAACATGGAGTGCAGCAGAAACAGA GGAGGATGGCTGGCAAACCTTCAAGCAGGCCCTTGGAAAGCATCCGAGAGTGTCAAGATG CAGCTCAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q32PP1 |
Definition |
sp|Q32PP1|CE045_DANRE UPF0544 protein C5orf45 homolog OS=Danio rerio |
Align length |
147 |
Score (bit) |
55.5 |
E-value |
2.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9M9H0 |
Definition |
tr|Q9M9H0|Q9M9H0_ARATH F14O23.14 (Putative uncharacterized protein) OS=Arabidopsis thaliana |
Align length |
85 |
Score (bit) |
87.4 |
E-value |
6.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962347|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_K01, 5' (608 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9M9H0|Q9M9H0_ARATH F14O23.14 (Putative uncharacterized prote... 87 6e-16 tr|Q5XVG5|Q5XVG5_ARATH Putative uncharacterized protein OS=Arabi... 87 6e-16 tr|Q5BPV4|Q5BPV4_ARATH Putative uncharacterized protein OS=Arabi... 87 6e-16 tr|Q5JMC8|Q5JMC8_ORYSJ Putative uncharacterized protein P0683B11... 78 3e-13 tr|Q0JJU5|Q0JJU5_ORYSJ Os01g0716300 protein (Putative uncharacte... 77 6e-13 tr|B8A8P6|B8A8P6_ORYSI Putative uncharacterized protein OS=Oryza... 77 6e-13 tr|B4FGH9|B4FGH9_MAIZE Putative uncharacterized protein OS=Zea m... 77 6e-13 tr|B6TNE2|B6TNE2_MAIZE Putative uncharacterized protein OS=Zea m... 76 1e-12 tr|A7QRK9|A7QRK9_VITVI Chromosome undetermined scaffold_151, who... 73 1e-11 tr|B0ENW9|B0ENW9_ENTDI Putative uncharacterized protein OS=Entam... 57 6e-07 tr|Q55D89|Q55D89_DICDI Putative uncharacterized protein OS=Dicty... 56 1e-06 tr|B6MVB3|B6MVB3_BRAFL Putative uncharacterized protein OS=Branc... 54 7e-06 tr|B6LNM9|B6LNM9_BRAFL Putative uncharacterized protein OS=Branc... 54 7e-06 tr|B3SE35|B3SE35_TRIAD Putative uncharacterized protein OS=Trich... 52 3e-05 tr|B3S9Y7|B3S9Y7_TRIAD Putative uncharacterized protein OS=Trich... 52 3e-05 tr|A7SF83|A7SF83_NEMVE Predicted protein OS=Nematostella vectens... 48 4e-04 tr|B7Z1T6|B7Z1T6_HUMAN cDNA FLJ56341 OS=Homo sapiens PE=2 SV=1 47 0.001 tr|B2RYM4|B2RYM4_RAT RGD1564036 protein (Similar to RIKEN cDNA 3... 46 0.002 tr|Q17AQ2|Q17AQ2_AEDAE Putative uncharacterized protein OS=Aedes... 46 0.002 tr|B0WGZ6|B0WGZ6_CULQU Putative uncharacterized protein OS=Culex... 42 0.028 tr|B4N6W3|B4N6W3_DROWI GK24192 OS=Drosophila willistoni GN=GK241... 41 0.047 tr|Q7PFR8|Q7PFR8_ANOGA AGAP003801-PA (Fragment) OS=Anopheles gam... 39 0.18 tr|B4QLU3|B4QLU3_DROSI GD14597 OS=Drosophila simulans GN=GD14597... 39 0.23 tr|B3NHK8|B3NHK8_DROER GG13699 OS=Drosophila erecta GN=GG13699 P... 37 0.68 tr|Q7PDP1|Q7PDP1_PLAYO P-Type ATPase OS=Plasmodium yoelii yoelii... 37 1.2 tr|Q2M188|Q2M188_DROPS GA18847 OS=Drosophila pseudoobscura pseud... 36 2.0 tr|B4HJ17|B4HJ17_DROSE GM25586 OS=Drosophila sechellia GN=GM2558... 36 2.0 tr|A6NCB8|A6NCB8_HUMAN Putative uncharacterized protein C5orf45 ... 35 2.6 tr|Q7TLU7|Q7TLU7_NPVCF Proliferating cell nuclear antigen OS=Cho... 35 3.4 tr|Q5QV88|Q5QV88_IDILO Uncharacterized conserved protein OS=Idio... 35 3.4
>tr|Q9M9H0|Q9M9H0_ARATH F14O23.14 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g71760 PE=2 SV=1 Length = 259
Score = 87.4 bits (215), Expect = 6e-16 Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 4/85 (4%) Frame = +3
Query: 21 FVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSRN 200 F+AL C+ C+ MQVK K+SSNKW C +CN+KQSV+KVFA AK++R FVQ +N+SR Sbjct: 6 FIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNMSRK 65
Query: 201 RAQDRALAE----LVVYVEKQGNDD 263 A + A A VYVE + N++ Sbjct: 66 VADEEAHAVGDSFPEVYVEGEVNEE 90
>tr|Q5XVG5|Q5XVG5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 135
Score = 87.4 bits (215), Expect = 6e-16 Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 4/85 (4%) Frame = +3
Query: 21 FVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSRN 200 F+AL C+ C+ MQVK K+SSNKW C +CN+KQSV+KVFA AK++R FVQ +N+SR Sbjct: 6 FIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNMSRK 65
Query: 201 RAQDRALAE----LVVYVEKQGNDD 263 A + A A VYVE + N++ Sbjct: 66 VADEEAHAVGDSFPEVYVEGEVNEE 90
>tr|Q5BPV4|Q5BPV4_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana GN=At1g71760 PE=2 SV=1 Length = 276
Score = 87.4 bits (215), Expect = 6e-16 Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 4/85 (4%) Frame = +3
Query: 21 FVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSRN 200 F+AL C+ C+ MQVK K+SSNKW C +CN+KQSV+KVFA AK++R FVQ +N+SR Sbjct: 6 FIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNMSRK 65
Query: 201 RAQDRALAE----LVVYVEKQGNDD 263 A + A A VYVE + N++ Sbjct: 66 VADEEAHAVGDSFPEVYVEGEVNEE 90
>tr|Q5JMC8|Q5JMC8_ORYSJ Putative uncharacterized protein P0683B11.12 OS=Oryza sativa subsp. japonica GN=P0683B11.12 PE=4 SV=1 Length = 219
Score = 78.2 bits (191), Expect = 3e-13 Identities = 61/189 (32%), Positives = 81/189 (42%), Gaps = 2/189 (1%) Frame = +3
Query: 21 FVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSRN 200 F+AL C C+ MQVK K+SSNKW C +CN++QSV +V A A D+R+FVQE NLSR Sbjct: 6 FLALQCVQCSTMQVKPQKKSSNKWVCVVCNQRQSVMRVHARGHRAADLRRFVQEANLSRG 65
Query: 201 RAQDRALAE--LVVYVEKQGNDDFAHDDHLCCSESSRACRDILSYNCNCQEVIVGSKWDE 374 RA + E V V + D+F E R W + Sbjct: 66 RAAHVPVPEEDWVPAVPGEQRDEFP-------KERKRR-----------------MDWSD 101
Query: 375 YLPQDDGVYSEVAEYVTHDAEFVTVVPETHARISKGRIPSASNKATSQHGVQQKQRRMAG 554 YL +D G Y + E + V E +P K TS + Q + G Sbjct: 102 YL-EDPGEYDGGGHHEEARDEGIQVTTE---------LPEKRPKVTSLKRAPKAQLGLGG 151
Query: 555 KPSSRPLES 581 K P+ S Sbjct: 152 KRPKTPVTS 160
>tr|Q0JJU5|Q0JJU5_ORYSJ Os01g0716300 protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=Os01g0716300 PE=4 SV=1 Length = 219
Score = 77.4 bits (189), Expect = 6e-13 Identities = 36/62 (58%), Positives = 45/62 (72%) Frame = +3
Query: 21 FVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSRN 200 F+AL C C+ MQVK K+SSNKW C +CN++QSV +V A A D+R+FVQE NLSR Sbjct: 6 FLALQCVQCSTMQVKPQKKSSNKWVCVVCNQRQSVMRVHARGHRAADLRRFVQEANLSRG 65
Query: 201 RA 206 RA Sbjct: 66 RA 67
>tr|B8A8P6|B8A8P6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03514 PE=4 SV=1 Length = 221
Score = 77.4 bits (189), Expect = 6e-13 Identities = 36/62 (58%), Positives = 45/62 (72%) Frame = +3
Query: 21 FVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSRN 200 F+AL C C+ MQVK K+SSNKW C +CN++QSV +V A A D+R+FVQE NLSR Sbjct: 6 FLALQCVQCSTMQVKPQKKSSNKWVCVVCNQRQSVMRVHARGHRAADLRRFVQEANLSRG 65
Query: 201 RA 206 RA Sbjct: 66 RA 67
>tr|B4FGH9|B4FGH9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 239
Score = 77.4 bits (189), Expect = 6e-13 Identities = 37/72 (51%), Positives = 47/72 (65%) Frame = +3
Query: 12 MPTFVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNL 191 M F+AL C C MQVK K+SSNKW C +CN++QSV V A A D+R+FVQ+ NL Sbjct: 3 MRLFIALQCVQCATMQVKQQKKSSNKWVCVVCNQRQSVLHVHARGYRAADLRRFVQDTNL 62
Query: 192 SRNRAQDRALAE 227 +R R + LAE Sbjct: 63 ARGRREFAPLAE 74
>tr|B6TNE2|B6TNE2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 239
Score = 76.3 bits (186), Expect = 1e-12 Identities = 36/69 (52%), Positives = 45/69 (65%) Frame = +3
Query: 21 FVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSRN 200 F+AL C C MQVK K SSNKW C +CN++QSV V A A D+R+FVQ+ NL+R Sbjct: 6 FIALQCVQCATMQVKQQKRSSNKWVCVVCNQRQSVLHVHARGYRAADLRRFVQDTNLARG 65
Query: 201 RAQDRALAE 227 R + LAE Sbjct: 66 RREFAPLAE 74
>tr|A7QRK9|A7QRK9_VITVI Chromosome undetermined scaffold_151, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005399001 PE=4 SV=1 Length = 219
Score = 73.2 bits (178), Expect = 1e-11 Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Frame = +3
Query: 57 QVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSRNRA-QDRALAELV 233 QVK K++SNKWTC +CNEKQSVRKV+A AKD+RKFVQ +N+SR ++ L +V Sbjct: 13 QVKQQKKNSNKWTCVVCNEKQSVRKVYAQGSMAKDVRKFVQSFNMSRKSIDEEENLTVMV 72
Query: 234 VYVEKQGNDDFAHDDHLCCSESSRACRDILSYNCNCQEVIVGSKWDEYLPQDD 392 E+ G CS + + R S W EYL ++ Sbjct: 73 ADGEEVGGS---------CSGNGKKRR---------------SDWSEYLDPEE 101
>tr|B0ENW9|B0ENW9_ENTDI Putative uncharacterized protein OS=Entamoeba dispar SAW760 GN=EDI_197310 PE=4 SV=1 Length = 273
Score = 57.4 bits (137), Expect = 6e-07 Identities = 28/59 (47%), Positives = 34/59 (57%) Frame = +3
Query: 21 FVALLCFNCNMMQVKHAKESSNKWTCSLCNEKQSVRKVFATSVAAKDIRKFVQEYNLSR 197 FV L CF+C M QV H K K+ C +C EKQS + +F S AKD+R EYN R Sbjct: 5 FVLLQCFSCKMFQV-HIKNKLKKFQCKVCGEKQSYKHIFGISNQAKDLRTLCGEYNEKR 62
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