DK962415 [AcEST]

DK962415
Clone id	TST39A01NGRL0013_M24
Library	TST39
Length	622
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_M24. 5' end sequence.
Accession	DK962415
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL2593Contig1
Sequence	GTGAACTTGGCGAGTTTTCCTTAAACTTCAACTCTTGGCAGACTTTGGCTCGCACAACCC TTTTCTTGCAGGCCCATAAATGAACTTTGTTTGGGTTGCGGGTGTAAACAAGGGCCATTT GGGCGAACGTTCCCTCCTCGCAGCAGACGGGCAGAAGAATAATGATTTAAACATAACTAA TCGAAGTCCAGCGTATGTGAGGCTTGCCTCATTTTATTACCTGCGCTCCCACCACCAGCT CTTCTCCTCCCTCCTCTATCACAAAAAAGAGCAGGCATCGCCATAGCCGAGCTTCTCTCC AAGCTTAGCACTACATTTCTCTTTCGCGCCTGCTGCTTGTTCACCTAAGGCTCTTAGCGA GCCAATTCTTAGCTGCGAGCTTCTCATTGGCAGTATGACAGTTTTCTTGTGGCATCTCTT CTTTCTAATCTCCGATCCCTGAGACACCGCTCCTTCTAACTGGTCGCTCTTTCTTCTGCT CTCTCGATCGCATCACCGTTTTAATTTCTCCGGCCTCTTGTAAATGAGAGATCAAGGCGG GGGGTTGTTGTTTTCTCCTCCGATTGAAAAGGAAAAAAGTGAGCGTAAAGCTGAGCGGGA GGGAGGAAGGCAATGAATTACC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK962415\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_M24, 5' (622 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B5DQS8
Definition	tr\|B5DQS8\|B5DQS8_DROPS GA23659 OS=Drosophila pseudoobscura pseudoobscura
Align length	67
Score (bit)	33.9
E-value	8.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK962415\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_M24, 5' (622 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B5DQS8\|B5DQS8_DROPS GA23659 OS=Drosophila pseudoobscura pseud... 34 8.0 >tr\|B5DQS8\|B5DQS8_DROPS GA23659 OS=Drosophila pseudoobscura pseudoobscura GN=GA23659 PE=4 SV=1 Length = 645 Score = 33.9 bits (76), Expect = 8.0 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = -2 Query: 483 ESRRKSDQLEGAVSQGSE-IRKKRCHKKTVILPMRSSQLRIGS-LRALGEQAAGAKEKCS 310 E RRK D+ G + +E ++KK+ + + +R +I LR GE G KC Sbjct: 181 ELRRKLDKANGEQGKAAEELKKKQADLEEQLAGLREQMEKIEEKLRKSGE---GVSNKCC 237 Query: 309 AKLGEKL 289 A+LGEKL Sbjct: 238 AELGEKL 244