DK962442 |
Clone id |
TST39A01NGRL0013_O06 |
Library |
TST39 |
Length |
647 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_O06. 5' end sequence. |
Accession |
DK962442 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL974Contig1 |
Sequence |
CACTGTCAGTCTCTCCTCTTCATTGACCATCATTGAGCAATACACAGTCGAATATCCATG TCAGCTGCGGCAGGTGCAGCATTTACTCGCCCTCTCTATGGCGCAGAGCATGTGAAAGCC CTTCTTCAATCTGCAGTTTCTTGTACTTCCTCCTCTTACAACACTGCCAGCAGTTGTGGC AAGAAGGGTGCATGGCTGCATCCTCGCCAACAATTTGCGGCTGCAAGGAAGAAATCTGTC TTGGGCCAGCAAGATTGGACCGTCTCTTTTGCGGAATTTTGCAGATACTCACAGCCTAAT TCAGAGCAGCACAATTGCCTGCCATTGATGCCACGTAGCCGTGTTCGAGAAGGCGGAGCT GACAGTGAGAGTAAAGGCAGCAATCCTTCATTCGATTCTGGAAATAGTGTTTTGAAGAAG GAACCTTCCTTGCTGTTGAGCTTAGTGCAAGAGATTCAACCTCTAGATGCAAGTCAAATC AGCAAAGAGGTTTCTGCAGATAGCACCGATGCCATGAAACGGACAATTTCAGGCATGCTG GGTCTGCTGCCATCTGACCAGTTTCATGTGACCGTGGAAACATCCCGCGAGCCGCTTGGA AAGCTTTTTGTGTCTTCCATGATGACAGGCTACACTCTAAGAAATGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q55GR7 |
Definition |
sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F OS=Dictyostelium discoideum |
Align length |
45 |
Score (bit) |
32.0 |
E-value |
2.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SEL1 |
Definition |
tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) OS=Glycine max |
Align length |
123 |
Score (bit) |
105.0 |
E-value |
2.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962442|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_O06, 5' (647 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) O... 105 2e-21 tr|A7QW70|A7QW70_VITVI Chromosome chr3 scaffold_199, whole genom... 104 4e-21 tr|Q3EC02|Q3EC02_ARATH Uncharacterized protein At2g14910.2 OS=Ar... 97 8e-19 tr|O82329|O82329_ARATH Putative uncharacterized protein At2g1491... 97 8e-19 tr|B4FRH2|B4FRH2_MAIZE Putative uncharacterized protein OS=Zea m... 96 2e-18 tr|Q75I52|Q75I52_ORYSJ Expressed protein (Seed maturation protei... 95 3e-18 tr|B8AM69|B8AM69_ORYSI Putative uncharacterized protein OS=Oryza... 95 3e-18 tr|A3AKA6|A3AKA6_ORYSJ Putative uncharacterized protein OS=Oryza... 95 3e-18 tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza... 95 3e-18 tr|Q2QN27|Q2QN27_ORYSJ Seed maturation protein PM23, putative, e... 93 2e-17 tr|Q2QN28|Q2QN28_ORYSJ Os12g0581700 protein OS=Oryza sativa subs... 92 2e-17 tr|A2ZM33|A2ZM33_ORYSI Putative uncharacterized protein OS=Oryza... 92 2e-17 tr|A7QK34|A7QK34_VITVI Chromosome chr16 scaffold_110, whole geno... 90 1e-16 tr|Q9LFQ8|Q9LFQ8_ARATH Seed maturation-like protein (At4g33110) ... 90 1e-16 tr|Q8LGA2|Q8LGA2_ARATH Seed maturation-like protein OS=Arabidops... 90 1e-16 tr|A9NWY6|A9NWY6_PICSI Putative uncharacterized protein OS=Picea... 86 2e-15 tr|A7PMK3|A7PMK3_VITVI Chromosome chr14 scaffold_21, whole genom... 85 4e-15 tr|B4VTM6|B4VTM6_9CYAN Putative uncharacterized protein OS=Micro... 73 1e-11 tr|A3ITT5|A3ITT5_9CHRO Putative uncharacterized protein OS=Cyano... 73 1e-11 tr|A5B2M0|A5B2M0_VITVI Putative uncharacterized protein OS=Vitis... 73 2e-11 tr|Q10XF5|Q10XF5_TRIEI Putative uncharacterized protein OS=Trich... 72 4e-11 tr|B2J978|B2J978_NOSP7 Putative uncharacterized protein OS=Nosto... 71 5e-11 tr|B1X0Q4|B1X0Q4_CYAA5 Putative uncharacterized protein OS=Cyano... 71 5e-11 tr|B7JX53|B7JX53_SYNP8 Putative uncharacterized protein OS=Synec... 70 1e-10 tr|B4BWT7|B4BWT7_9CHRO Putative uncharacterized protein OS=Cyano... 70 1e-10 tr|Q4C086|Q4C086_CROWT Putative uncharacterized protein OS=Croco... 69 2e-10 tr|A0ZFS5|A0ZFS5_NODSP Putative uncharacterized protein OS=Nodul... 69 3e-10 tr|P74262|P74262_SYNY3 Slr1674 protein OS=Synechocystis sp. (str... 68 5e-10 tr|B0JGP0|B0JGP0_MICAN Putative uncharacterized protein OS=Micro... 68 5e-10 tr|A8YLD3|A8YLD3_MICAE Similar to tr|Q9KHE7|Q9KHE7 OS=Microcysti... 68 5e-10
>tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) OS=Glycine max GN=PM23 PE=2 SV=1 Length = 404
Score = 105 bits (263), Expect = 2e-21 Identities = 61/123 (49%), Positives = 73/123 (59%) Frame = +1
Query: 277 FCRYSQPNSEQHNCLPLMPRSRVREGGADSESKGSNPSFDSGNSVLKKEPSLLLSLVQEI 456 F RY PN + SR + S+ F S + + S+L L+QEI Sbjct: 43 FHRYPNPNPSLFRPSLSLSFSRTKPRSPFLVLAASSHDFASNS-----KKSVLTELIQEI 97
Query: 457 QPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYT 636 +PLD S I K+V + DAMKRTISGMLGLLPSDQFHV +E EPL KL +SSMMTGYT Sbjct: 98 EPLDVSHIQKDVPPTTADAMKRTISGMLGLLPSDQFHVVIEALWEPLSKLLISSMMTGYT 157
Query: 637 LRN 645 LRN Sbjct: 158 LRN 160
>tr|A7QW70|A7QW70_VITVI Chromosome chr3 scaffold_199, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007721001 PE=4 SV=1 Length = 388
Score = 104 bits (260), Expect = 4e-21 Identities = 60/97 (61%), Positives = 69/97 (71%), Gaps = 6/97 (6%) Frame = +1
Query: 373 KGSNPSFD------SGNSVLKKEPSLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISG 534 + S+ SFD S NS KK S+L +L+QEI+PLD S I K+V + DAMKRTISG Sbjct: 48 RASSSSFDDLSSERSANSRSKK--SVLSNLIQEIEPLDVSLIQKDVLPTTVDAMKRTISG 105
Query: 535 MLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYTLRN 645 MLGLLPSDQFHV +E PL KL VSSMMTGYTLRN Sbjct: 106 MLGLLPSDQFHVVIEALWLPLSKLLVSSMMTGYTLRN 142
>tr|Q3EC02|Q3EC02_ARATH Uncharacterized protein At2g14910.2 OS=Arabidopsis thaliana GN=At2g14910 PE=4 SV=1 Length = 366
Score = 97.1 bits (240), Expect = 8e-19 Identities = 49/72 (68%), Positives = 57/72 (79%) Frame = +1
Query: 430 LLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLF 609 +L L+QEI+PLD S I K+V + DAMKRTISGMLGLLPSD+F V +E+ EPL KL Sbjct: 80 VLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLSKLL 139
Query: 610 VSSMMTGYTLRN 645 VSSMMTGYTLRN Sbjct: 140 VSSMMTGYTLRN 151
>tr|O82329|O82329_ARATH Putative uncharacterized protein At2g14910 OS=Arabidopsis thaliana GN=At2g14910 PE=2 SV=1 Length = 386
Score = 97.1 bits (240), Expect = 8e-19 Identities = 49/72 (68%), Positives = 57/72 (79%) Frame = +1
Query: 430 LLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLF 609 +L L+QEI+PLD S I K+V + DAMKRTISGMLGLLPSD+F V +E+ EPL KL Sbjct: 80 VLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLSKLL 139
Query: 610 VSSMMTGYTLRN 645 VSSMMTGYTLRN Sbjct: 140 VSSMMTGYTLRN 151
>tr|B4FRH2|B4FRH2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 392
Score = 95.5 bits (236), Expect = 2e-18 Identities = 48/73 (65%), Positives = 58/73 (79%) Frame = +1
Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606 S+L +L+Q+I+PLD S I K+V+ ++ DAMKRTISGMLGLLPSDQF V VE P KL Sbjct: 71 SMLWNLIQDIEPLDLSVIQKDVAPETVDAMKRTISGMLGLLPSDQFRVIVEALWNPFFKL 130
Query: 607 FVSSMMTGYTLRN 645 VSS+MTGYTLRN Sbjct: 131 LVSSIMTGYTLRN 143
>tr|Q75I52|Q75I52_ORYSJ Expressed protein (Seed maturation protein PM23, putative, expressed) OS=Oryza sativa subsp. japonica GN=Os03g41080 PE=4 SV=1 Length = 405
Score = 95.1 bits (235), Expect = 3e-18 Identities = 48/73 (65%), Positives = 57/73 (78%) Frame = +1
Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606 S+L +L+Q+I+PLD S I K+V ++ DAMKRTISGMLGLLPSDQF V VE P KL Sbjct: 83 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 142
Query: 607 FVSSMMTGYTLRN 645 VSS+MTGYTLRN Sbjct: 143 LVSSIMTGYTLRN 155
>tr|B8AM69|B8AM69_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12571 PE=4 SV=1 Length = 425
Score = 95.1 bits (235), Expect = 3e-18 Identities = 48/73 (65%), Positives = 57/73 (78%) Frame = +1
Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606 S+L +L+Q+I+PLD S I K+V ++ DAMKRTISGMLGLLPSDQF V VE P KL Sbjct: 137 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 196
Query: 607 FVSSMMTGYTLRN 645 VSS+MTGYTLRN Sbjct: 197 LVSSIMTGYTLRN 209
>tr|A3AKA6|A3AKA6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011228 PE=4 SV=1 Length = 405
Score = 95.1 bits (235), Expect = 3e-18 Identities = 48/73 (65%), Positives = 57/73 (78%) Frame = +1
Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606 S+L +L+Q+I+PLD S I K+V ++ DAMKRTISGMLGLLPSDQF V VE P KL Sbjct: 83 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 142
Query: 607 FVSSMMTGYTLRN 645 VSS+MTGYTLRN Sbjct: 143 LVSSIMTGYTLRN 155
>tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12569 PE=4 SV=1 Length = 419
Score = 95.1 bits (235), Expect = 3e-18 Identities = 48/73 (65%), Positives = 57/73 (78%) Frame = +1
Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606 S+L +L+Q+I+PLD S I K+V ++ DAMKRTISGMLGLLPSDQF V VE P KL Sbjct: 97 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 156
Query: 607 FVSSMMTGYTLRN 645 VSS+MTGYTLRN Sbjct: 157 LVSSIMTGYTLRN 169
>tr|Q2QN27|Q2QN27_ORYSJ Seed maturation protein PM23, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g39200 PE=4 SV=2 Length = 420
Score = 92.8 bits (229), Expect = 2e-17 Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 9/116 (7%) Frame = +1
Query: 325 LMPRSRVREGGADSE------SKGSNPSF---DSGNSVLKKEPSLLLSLVQEIQPLDASQ 477 L R R GGA E +G N F N ++ + S L +L+++I+PLD S Sbjct: 67 LHARGRPLRGGAYEEVSERAQPRGLNSMFLLHVIRNRRIEAKRSALWNLIKDIEPLDLSI 126
Query: 478 ISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYTLRN 645 I K+V +++ DAMKRT+SGMLGLLPSDQFHV +E+ P KL SS+MTGYTL N Sbjct: 127 IQKDVPSETVDAMKRTVSGMLGLLPSDQFHVVIESLWNPFFKLLASSIMTGYTLFN 182
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