DK962442
Clone id TST39A01NGRL0013_O06
Library
Length 647
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_O06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CACTGTCAGTCTCTCCTCTTCATTGACCATCATTGAGCAATACACAGTCGAATATCCATG
TCAGCTGCGGCAGGTGCAGCATTTACTCGCCCTCTCTATGGCGCAGAGCATGTGAAAGCC
CTTCTTCAATCTGCAGTTTCTTGTACTTCCTCCTCTTACAACACTGCCAGCAGTTGTGGC
AAGAAGGGTGCATGGCTGCATCCTCGCCAACAATTTGCGGCTGCAAGGAAGAAATCTGTC
TTGGGCCAGCAAGATTGGACCGTCTCTTTTGCGGAATTTTGCAGATACTCACAGCCTAAT
TCAGAGCAGCACAATTGCCTGCCATTGATGCCACGTAGCCGTGTTCGAGAAGGCGGAGCT
GACAGTGAGAGTAAAGGCAGCAATCCTTCATTCGATTCTGGAAATAGTGTTTTGAAGAAG
GAACCTTCCTTGCTGTTGAGCTTAGTGCAAGAGATTCAACCTCTAGATGCAAGTCAAATC
AGCAAAGAGGTTTCTGCAGATAGCACCGATGCCATGAAACGGACAATTTCAGGCATGCTG
GGTCTGCTGCCATCTGACCAGTTTCATGTGACCGTGGAAACATCCCGCGAGCCGCTTGGA
AAGCTTTTTGTGTCTTCCATGATGACAGGCTACACTCTAAGAAATGC
■■Homology search results ■■ -
sp_hit_id Q55GR7
Definition sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F OS=Dictyostelium discoideum
Align length 45
Score (bit) 32.0
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962442|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_O06, 5'
(647 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F OS=Dictyo... 32 2.9
sp|Q07963|UBR2_YEAST E3 ubiquitin-protein ligase UBR2 OS=Sacchar... 32 3.7
sp|Q6DFF9|MABP1_XENLA Mitogen-activated protein kinase-binding p... 31 6.4
sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo sap... 30 8.3
sp|O02466|ILPR_BRALA Insulin-like peptide receptor OS=Branchiost... 30 8.3
sp|Q75B79|ATG11_ASHGO Autophagy-related protein 11 OS=Ashbya gos... 30 8.3

>sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F
OS=Dictyostelium discoideum GN=elmoF PE=4 SV=1
Length = 1185

Score = 32.0 bits (71), Expect = 2.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1

Query: 298 NSEQHNCLPLMPRSRVREGGADSESKGSNPSFDSGNSVLKKEPSL 432
++EQH P PR ++ S G N + +SG+S L K+P L
Sbjct: 1070 SNEQHPVSPSYPRRQINIINGGGGSAGRNSTLNSGSSSLSKKPVL 1114


>sp|Q07963|UBR2_YEAST E3 ubiquitin-protein ligase UBR2
OS=Saccharomyces cerevisiae GN=UBR2 PE=1 SV=1
Length = 1872

Score = 31.6 bits (70), Expect = 3.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3

Query: 630 ACHHGRHKKLSKRLAGCFHGHMKLVRWQQTQHA*NCPF-HGIGAI 499
AC HG H K C GHMK +R Q Q N P +G G I
Sbjct: 1318 ACGHGSHTK-------CLSGHMKSIRGIQNQTTKNIPLSYGSGLI 1355


>sp|Q6DFF9|MABP1_XENLA Mitogen-activated protein kinase-binding
protein 1 OS=Xenopus laevis GN=mapkbp1 PE=2 SV=1
Length = 1580

Score = 30.8 bits (68), Expect = 6.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1

Query: 265 SFAEFCRYSQPNSEQHNCLPLMPRSRVR 348
S+ E R + +SE+ NCL MPR RVR
Sbjct: 814 SYWEMARGTNTSSERSNCLSKMPRQRVR 841


>sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo
sapiens GN=KRTAP9-3 PE=1 SV=1
Length = 159

Score = 30.4 bits (67), Expect = 8.3
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3

Query: 63 SCGRCSIYSPSLWRRACESPSSICSFLYFLLLQHC-QQLWQEGCMAASSPTIC 218
SCG+ S +P RR C P+S+C L L Q C Q C A T C
Sbjct: 89 SCGQSSSCAPVYCRRTCYHPTSVC--LPGCLNQSCGSNCCQPCCRPACCETTC 139


>sp|O02466|ILPR_BRALA Insulin-like peptide receptor OS=Branchiostoma
lanceolatum PE=2 SV=1
Length = 1363

Score = 30.4 bits (67), Expect = 8.3
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +3

Query: 159 QHCQQLWQEGCMAASSPTICGCKEEICL----GPARLDRLFC 272
+HCQ++ E C+ I GC E C+ GP D + C
Sbjct: 204 EHCQKVCPESCLGNCRDGISGCCHENCIGGCDGPTERDCVAC 245


>sp|Q75B79|ATG11_ASHGO Autophagy-related protein 11 OS=Ashbya
gossypii GN=ATG11 PE=3 SV=1
Length = 1072

Score = 30.4 bits (67), Expect = 8.3
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 17/155 (10%)
Frame = +1

Query: 208 QQFAAARKKSVLGQQDWTVSFAEFCRYSQPNSEQHNCLPLMPRSRVREGGADSESKGSNP 387
++ + ++ ++ ++ W+ F+ + Q ++ L + E G G+
Sbjct: 443 KEIQSVLQRELVFREKWSSDFSSYSEIFQWQDDKPQLAKLFSNASPLEVGRPCIDIGTIQ 502

Query: 388 SF----------DSGNSVLKKEPSLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGM 537
++ + ++LKK LS V Q + S ++ VS DSTD+M I G
Sbjct: 503 TYIEMLARCDVAEDSQTLLKKT----LSEVSRFQFIVKSPLAGSVSKDSTDSMNEVIEGY 558

Query: 538 LG-------LLPSDQFHVTVETSREPLGKLFVSSM 621
LL S QF TS P G L +S+
Sbjct: 559 KNRINKLELLLHSTQFS---NTSSWPTGVLNSNSL 590


tr_hit_id Q9SEL1
Definition tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) OS=Glycine max
Align length 123
Score (bit) 105.0
E-value 2.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962442|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_O06, 5'
(647 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) O... 105 2e-21
tr|A7QW70|A7QW70_VITVI Chromosome chr3 scaffold_199, whole genom... 104 4e-21
tr|Q3EC02|Q3EC02_ARATH Uncharacterized protein At2g14910.2 OS=Ar... 97 8e-19
tr|O82329|O82329_ARATH Putative uncharacterized protein At2g1491... 97 8e-19
tr|B4FRH2|B4FRH2_MAIZE Putative uncharacterized protein OS=Zea m... 96 2e-18
tr|Q75I52|Q75I52_ORYSJ Expressed protein (Seed maturation protei... 95 3e-18
tr|B8AM69|B8AM69_ORYSI Putative uncharacterized protein OS=Oryza... 95 3e-18
tr|A3AKA6|A3AKA6_ORYSJ Putative uncharacterized protein OS=Oryza... 95 3e-18
tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza... 95 3e-18
tr|Q2QN27|Q2QN27_ORYSJ Seed maturation protein PM23, putative, e... 93 2e-17
tr|Q2QN28|Q2QN28_ORYSJ Os12g0581700 protein OS=Oryza sativa subs... 92 2e-17
tr|A2ZM33|A2ZM33_ORYSI Putative uncharacterized protein OS=Oryza... 92 2e-17
tr|A7QK34|A7QK34_VITVI Chromosome chr16 scaffold_110, whole geno... 90 1e-16
tr|Q9LFQ8|Q9LFQ8_ARATH Seed maturation-like protein (At4g33110) ... 90 1e-16
tr|Q8LGA2|Q8LGA2_ARATH Seed maturation-like protein OS=Arabidops... 90 1e-16
tr|A9NWY6|A9NWY6_PICSI Putative uncharacterized protein OS=Picea... 86 2e-15
tr|A7PMK3|A7PMK3_VITVI Chromosome chr14 scaffold_21, whole genom... 85 4e-15
tr|B4VTM6|B4VTM6_9CYAN Putative uncharacterized protein OS=Micro... 73 1e-11
tr|A3ITT5|A3ITT5_9CHRO Putative uncharacterized protein OS=Cyano... 73 1e-11
tr|A5B2M0|A5B2M0_VITVI Putative uncharacterized protein OS=Vitis... 73 2e-11
tr|Q10XF5|Q10XF5_TRIEI Putative uncharacterized protein OS=Trich... 72 4e-11
tr|B2J978|B2J978_NOSP7 Putative uncharacterized protein OS=Nosto... 71 5e-11
tr|B1X0Q4|B1X0Q4_CYAA5 Putative uncharacterized protein OS=Cyano... 71 5e-11
tr|B7JX53|B7JX53_SYNP8 Putative uncharacterized protein OS=Synec... 70 1e-10
tr|B4BWT7|B4BWT7_9CHRO Putative uncharacterized protein OS=Cyano... 70 1e-10
tr|Q4C086|Q4C086_CROWT Putative uncharacterized protein OS=Croco... 69 2e-10
tr|A0ZFS5|A0ZFS5_NODSP Putative uncharacterized protein OS=Nodul... 69 3e-10
tr|P74262|P74262_SYNY3 Slr1674 protein OS=Synechocystis sp. (str... 68 5e-10
tr|B0JGP0|B0JGP0_MICAN Putative uncharacterized protein OS=Micro... 68 5e-10
tr|A8YLD3|A8YLD3_MICAE Similar to tr|Q9KHE7|Q9KHE7 OS=Microcysti... 68 5e-10

>tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment)
OS=Glycine max GN=PM23 PE=2 SV=1
Length = 404

Score = 105 bits (263), Expect = 2e-21
Identities = 61/123 (49%), Positives = 73/123 (59%)
Frame = +1

Query: 277 FCRYSQPNSEQHNCLPLMPRSRVREGGADSESKGSNPSFDSGNSVLKKEPSLLLSLVQEI 456
F RY PN + SR + S+ F S + + S+L L+QEI
Sbjct: 43 FHRYPNPNPSLFRPSLSLSFSRTKPRSPFLVLAASSHDFASNS-----KKSVLTELIQEI 97

Query: 457 QPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYT 636
+PLD S I K+V + DAMKRTISGMLGLLPSDQFHV +E EPL KL +SSMMTGYT
Sbjct: 98 EPLDVSHIQKDVPPTTADAMKRTISGMLGLLPSDQFHVVIEALWEPLSKLLISSMMTGYT 157

Query: 637 LRN 645
LRN
Sbjct: 158 LRN 160


>tr|A7QW70|A7QW70_VITVI Chromosome chr3 scaffold_199, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00007721001
PE=4 SV=1
Length = 388

Score = 104 bits (260), Expect = 4e-21
Identities = 60/97 (61%), Positives = 69/97 (71%), Gaps = 6/97 (6%)
Frame = +1

Query: 373 KGSNPSFD------SGNSVLKKEPSLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISG 534
+ S+ SFD S NS KK S+L +L+QEI+PLD S I K+V + DAMKRTISG
Sbjct: 48 RASSSSFDDLSSERSANSRSKK--SVLSNLIQEIEPLDVSLIQKDVLPTTVDAMKRTISG 105

Query: 535 MLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYTLRN 645
MLGLLPSDQFHV +E PL KL VSSMMTGYTLRN
Sbjct: 106 MLGLLPSDQFHVVIEALWLPLSKLLVSSMMTGYTLRN 142


>tr|Q3EC02|Q3EC02_ARATH Uncharacterized protein At2g14910.2
OS=Arabidopsis thaliana GN=At2g14910 PE=4 SV=1
Length = 366

Score = 97.1 bits (240), Expect = 8e-19
Identities = 49/72 (68%), Positives = 57/72 (79%)
Frame = +1

Query: 430 LLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLF 609
+L L+QEI+PLD S I K+V + DAMKRTISGMLGLLPSD+F V +E+ EPL KL
Sbjct: 80 VLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLSKLL 139

Query: 610 VSSMMTGYTLRN 645
VSSMMTGYTLRN
Sbjct: 140 VSSMMTGYTLRN 151


>tr|O82329|O82329_ARATH Putative uncharacterized protein At2g14910
OS=Arabidopsis thaliana GN=At2g14910 PE=2 SV=1
Length = 386

Score = 97.1 bits (240), Expect = 8e-19
Identities = 49/72 (68%), Positives = 57/72 (79%)
Frame = +1

Query: 430 LLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLF 609
+L L+QEI+PLD S I K+V + DAMKRTISGMLGLLPSD+F V +E+ EPL KL
Sbjct: 80 VLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLSKLL 139

Query: 610 VSSMMTGYTLRN 645
VSSMMTGYTLRN
Sbjct: 140 VSSMMTGYTLRN 151


>tr|B4FRH2|B4FRH2_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 392

Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +1

Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606
S+L +L+Q+I+PLD S I K+V+ ++ DAMKRTISGMLGLLPSDQF V VE P KL
Sbjct: 71 SMLWNLIQDIEPLDLSVIQKDVAPETVDAMKRTISGMLGLLPSDQFRVIVEALWNPFFKL 130

Query: 607 FVSSMMTGYTLRN 645
VSS+MTGYTLRN
Sbjct: 131 LVSSIMTGYTLRN 143


>tr|Q75I52|Q75I52_ORYSJ Expressed protein (Seed maturation protein
PM23, putative, expressed) OS=Oryza sativa subsp.
japonica GN=Os03g41080 PE=4 SV=1
Length = 405

Score = 95.1 bits (235), Expect = 3e-18
Identities = 48/73 (65%), Positives = 57/73 (78%)
Frame = +1

Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606
S+L +L+Q+I+PLD S I K+V ++ DAMKRTISGMLGLLPSDQF V VE P KL
Sbjct: 83 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 142

Query: 607 FVSSMMTGYTLRN 645
VSS+MTGYTLRN
Sbjct: 143 LVSSIMTGYTLRN 155


>tr|B8AM69|B8AM69_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12571 PE=4 SV=1
Length = 425

Score = 95.1 bits (235), Expect = 3e-18
Identities = 48/73 (65%), Positives = 57/73 (78%)
Frame = +1

Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606
S+L +L+Q+I+PLD S I K+V ++ DAMKRTISGMLGLLPSDQF V VE P KL
Sbjct: 137 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 196

Query: 607 FVSSMMTGYTLRN 645
VSS+MTGYTLRN
Sbjct: 197 LVSSIMTGYTLRN 209


>tr|A3AKA6|A3AKA6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_011228 PE=4 SV=1
Length = 405

Score = 95.1 bits (235), Expect = 3e-18
Identities = 48/73 (65%), Positives = 57/73 (78%)
Frame = +1

Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606
S+L +L+Q+I+PLD S I K+V ++ DAMKRTISGMLGLLPSDQF V VE P KL
Sbjct: 83 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 142

Query: 607 FVSSMMTGYTLRN 645
VSS+MTGYTLRN
Sbjct: 143 LVSSIMTGYTLRN 155


>tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12569 PE=4 SV=1
Length = 419

Score = 95.1 bits (235), Expect = 3e-18
Identities = 48/73 (65%), Positives = 57/73 (78%)
Frame = +1

Query: 427 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 606
S+L +L+Q+I+PLD S I K+V ++ DAMKRTISGMLGLLPSDQF V VE P KL
Sbjct: 97 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 156

Query: 607 FVSSMMTGYTLRN 645
VSS+MTGYTLRN
Sbjct: 157 LVSSIMTGYTLRN 169


>tr|Q2QN27|Q2QN27_ORYSJ Seed maturation protein PM23, putative,
expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os12g39200 PE=4 SV=2
Length = 420

Score = 92.8 bits (229), Expect = 2e-17
Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 9/116 (7%)
Frame = +1

Query: 325 LMPRSRVREGGADSE------SKGSNPSF---DSGNSVLKKEPSLLLSLVQEIQPLDASQ 477
L R R GGA E +G N F N ++ + S L +L+++I+PLD S
Sbjct: 67 LHARGRPLRGGAYEEVSERAQPRGLNSMFLLHVIRNRRIEAKRSALWNLIKDIEPLDLSI 126

Query: 478 ISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYTLRN 645
I K+V +++ DAMKRT+SGMLGLLPSDQFHV +E+ P KL SS+MTGYTL N
Sbjct: 127 IQKDVPSETVDAMKRTVSGMLGLLPSDQFHVVIESLWNPFFKLLASSIMTGYTLFN 182