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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962446
Clone id TST39A01NGRL0013_O10
Library
Length 591
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_O10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GATCCCTGGCGCGATCACGTCTGCATCCCTTCATCGGCCTCTTCAGCAGCAACTTCTGCT
GCCCTCCTCCCCGCTCCTCCTCCTACTGCGTCTTCTCCCTCTCCCGCCGGCGCTTCACTG
CAGCTCAGCATCAGCGAGGGCTCCCCCATTACCTCGCTCTTTTCAGACCCGTATCCTACC
GCGTCTTGGGATGCTGTCCCGGGCCTTGAGTCGCAACAGATCCAAGCCCTTCTGAAGCTT
TCGGCCAAGGGAGTCTTTTGGAAGCACCCCTGCAAAGCAACATCTTGCGTGTTTACGCTC
CACCATGGTGGAGATGTGGAAGCAGATGGGAACTGTCTCTTCTCTGCGGCACAAAAAGCG
ATGTGCCTGCGAGACGAATGTCCACAGGCTGTAAGAAAGAGGACAGTGCAGAGGTTTCTT
CGCGACTATGAAAATGGCGTCATGCAGAAAGTAGCCACAGATCAAGCCATTAAGCACTTA
TACAGCCCAGATCTGAATTCTGGGTGGGGAGTACATGTTGTTCAAGAGGTCAAGCTGCTG
GCAAAAAAGGTTGACAGAGAAGCGATGGACACTGCTATTGAGGAGCTCATG
■■Homology search results ■■ -
sp_hit_id Q2KIH8
Definition sp|Q2KIH8|OD3L1_BOVIN Outer dense fiber protein 3-like protein 1 OS=Bos taurus
Align length 42
Score (bit) 30.8
E-value 5.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962446|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_O10, 5'
         (591 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2KIH8|OD3L1_BOVIN Outer dense fiber protein 3-like protein 1...    31   5.3  
sp|Q5RBU3|CMBL_PONAB Carboxymethylenebutenolidase homolog OS=Pon...    30   9.1  
sp|Q96DG6|CMBL_HUMAN Carboxymethylenebutenolidase homolog OS=Hom...    30   9.1  
sp|Q80WC7|AGFG2_MOUSE Arf-GAP domain and FG repeats-containing p...    30   9.1  

>sp|Q2KIH8|OD3L1_BOVIN Outer dense fiber protein 3-like protein 1
           OS=Bos taurus GN=ODF3L1 PE=2 SV=1
          Length = 201

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 198 PGP*VATDPSPSEAFGQGSLLEAPLQSNILRVYAPPWWRCGS 323
           PGP    DP  +  FG  S  + P+  +I  +  PPW R GS
Sbjct: 85  PGPCYFLDPKITR-FGMASCPQVPMAEHISNLPWPPWTRTGS 125


>sp|Q5RBU3|CMBL_PONAB Carboxymethylenebutenolidase homolog OS=Pongo
           abelii GN=CMBL PE=2 SV=1
          Length = 245

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 447 LHDAIFIVAKKPLHCPLSYSLWTFVSQAHRFLCRREE 337
           L D   +  K   HC + Y + TF  Q H F+ R+ E
Sbjct: 184 LKDVSLLTQKLKEHCKVEYQIKTFSGQTHGFVHRKRE 220


>sp|Q96DG6|CMBL_HUMAN Carboxymethylenebutenolidase homolog OS=Homo
           sapiens GN=CMBL PE=1 SV=1
          Length = 245

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 447 LHDAIFIVAKKPLHCPLSYSLWTFVSQAHRFLCRREE 337
           L D   +  K   HC + Y + TF  Q H F+ R+ E
Sbjct: 184 LKDVSLLTQKLKEHCKVEYQIKTFSGQTHGFVHRKRE 220


>sp|Q80WC7|AGFG2_MOUSE Arf-GAP domain and FG repeats-containing
           protein 2 OS=Mus musculus GN=Agfg2 PE=1 SV=1
          Length = 479

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = +1

Query: 118 LQLSISEGSPITSLFSDPYPT----ASWDAVPGLESQ 216
           +Q S+ EG PI +L  DP P+    AS  + PG +SQ
Sbjct: 166 VQGSVPEGKPIRTLLGDPVPSLSDPASTSSQPGSQSQ 202
tr_hit_id Q9FYA0
Definition tr|Q9FYA0|Q9FYA0_ARATH Putative uncharacterized protein T19L5_60 (At5g13100) (AT5g13100/T19L5_60) OS=Arabidopsis thaliana
Align length 143
Score (bit) 151.0
E-value 2.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962446|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_O10, 5'
         (591 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FYA0|Q9FYA0_ARATH Putative uncharacterized protein T19L5_60...   151   2e-35
tr|A7QUV5|A7QUV5_VITVI Chromosome chr1 scaffold_180, whole genom...   143   6e-33
tr|A5BWC8|A5BWC8_VITVI Putative uncharacterized protein OS=Vitis...   143   6e-33
tr|B4FQR5|B4FQR5_MAIZE Putative uncharacterized protein OS=Zea m...   125   2e-27
tr|B4FTP8|B4FTP8_MAIZE Putative uncharacterized protein OS=Zea m...   124   5e-27
tr|Q93VY8|Q93VY8_ORYSJ Putative uncharacterized protein P0672D08...   123   9e-27
tr|B8ACS1|B8ACS1_ORYSI Putative uncharacterized protein OS=Oryza...   123   9e-27
tr|A2ZN96|A2ZN96_ORYSJ Putative uncharacterized protein OS=Oryza...   123   9e-27
tr|B8B7I9|B8B7I9_ORYSI Putative uncharacterized protein OS=Oryza...    68   3e-10
tr|B1I4Z3|B1I4Z3_DESAP Amylo-alpha-1,6-glucosidase OS=Desulforud...    36   1.9  
tr|B8PGA9|B8PGA9_9APHY Predicted protein OS=Postia placenta Mad-...    35   4.2  
tr|B3S338|B3S338_TRIAD Putative uncharacterized protein OS=Trich...    34   7.2  

>tr|Q9FYA0|Q9FYA0_ARATH Putative uncharacterized protein T19L5_60
           (At5g13100) (AT5g13100/T19L5_60) OS=Arabidopsis thaliana
           GN=T19L5_60 PE=2 SV=1
          Length = 354

 Score =  151 bits (382), Expect = 2e-35
 Identities = 79/143 (55%), Positives = 105/143 (73%), Gaps = 5/143 (3%)
 Frame = +1

Query: 178 TASWDAVPGLESQQIQALLKLSAKGVFWKHPCK---ATSCVFTLHHGGDVEADGNCLFSA 348
           T +WD V GLE  Q + L +L A+GV WKHP K   + S VF L HGG+V +DGNCLF+A
Sbjct: 58  TTAWDEVFGLEEAQRRHLSRLHARGVLWKHPGKDESSASVVFRLSHGGEVSSDGNCLFTA 117

Query: 349 AQKAMCLRDECPQAVRKRTVQRFLRDYENGVMQK--VATDQAIKHLYSPDLNSGWGVHVV 522
           +QKAM  R    + +R+RTV+RFL D+ +   ++  V TD AI+H+YSPDL SGWG+H+V
Sbjct: 118 SQKAMEARGIDARDLRRRTVRRFLEDFRSASEEEKEVITD-AIRHMYSPDLKSGWGIHIV 176

Query: 523 QEVKLLAKKVDREAMDTAIEELM 591
           QE KLLAKK +RE++D+AIEEL+
Sbjct: 177 QEEKLLAKKDERESLDSAIEELL 199


>tr|A7QUV5|A7QUV5_VITVI Chromosome chr1 scaffold_180, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00006993001
           PE=4 SV=1
          Length = 341

 Score =  143 bits (361), Expect = 6e-33
 Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 7/149 (4%)
 Frame = +1

Query: 166 DPYPTASWDAVPGLESQQIQALLKLSAKGVFWKHP------CKATSCVFTLHHGGDVEAD 327
           D     +W+ V GL+ QQ + L ++  KGV WKHP        A S VF L HGGDV+ D
Sbjct: 39  DVVDQVTWENVSGLQDQQRRHLQRIHQKGVLWKHPDGESSPAAAKSVVFRLSHGGDVDPD 98

Query: 328 GNCLFSAAQKAMCLRDECPQAVRKRTVQRFLRDYEN-GVMQKVATDQAIKHLYSPDLNSG 504
           GNCLF+A++KAM    +  + +R+RTV+RFL D  +   +++ + + AIKH+YSPDL SG
Sbjct: 99  GNCLFTASKKAMRCEIDARE-LRRRTVKRFLEDLGSLSSVERESANDAIKHMYSPDLRSG 157

Query: 505 WGVHVVQEVKLLAKKVDREAMDTAIEELM 591
           WG+HV+QEVKLLA+K DRE +D A+ EL+
Sbjct: 158 WGIHVIQEVKLLARKEDREGLDAAVGELL 186


>tr|A5BWC8|A5BWC8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_032094 PE=4 SV=1
          Length = 341

 Score =  143 bits (361), Expect = 6e-33
 Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 7/149 (4%)
 Frame = +1

Query: 166 DPYPTASWDAVPGLESQQIQALLKLSAKGVFWKHP------CKATSCVFTLHHGGDVEAD 327
           D     +W+ V GL+ QQ + L ++  KGV WKHP        A S VF L HGGDV+ D
Sbjct: 39  DVVDQVTWENVSGLQDQQRRHLQRIHQKGVLWKHPDGESSPAAAKSVVFRLSHGGDVDPD 98

Query: 328 GNCLFSAAQKAMCLRDECPQAVRKRTVQRFLRDYEN-GVMQKVATDQAIKHLYSPDLNSG 504
           GNCLF+A++KAM    +  + +R+RTV+RFL D  +   +++ + + AIKH+YSPDL SG
Sbjct: 99  GNCLFTASKKAMRCEIDARE-LRRRTVKRFLEDLGSLSSVERESANDAIKHMYSPDLRSG 157

Query: 505 WGVHVVQEVKLLAKKVDREAMDTAIEELM 591
           WG+HV+QEVKLLA+K DRE +D A+ EL+
Sbjct: 158 WGIHVIQEVKLLARKEDREGLDAAVGELL 186


>tr|B4FQR5|B4FQR5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 344

 Score =  125 bits (313), Expect = 2e-27
 Identities = 73/162 (45%), Positives = 100/162 (61%), Gaps = 6/162 (3%)
 Frame = +1

Query: 124 LSISEGSPITSLFSDPYPTASWDAVPGLESQQIQALLKLSAKGVFWKHPCK-----ATSC 288
           L+ S  +P +S  +   PT  WDAV  LE QQ + L ++  +GV WK         A   
Sbjct: 30  LAWSSPAPASSPEASISPTG-WDAVWALEDQQRRRLHRIWERGVAWKPSSPGAGEAAPPV 88

Query: 289 VFTLHHGGDVEADGNCLFSAAQKAMCLRDECPQAVRKRTVQRFLRDYEN-GVMQKVATDQ 465
           VF L HGG+V+ADGNCLF+AA+ A   + +  + +R R V+RF   Y   G   K A D 
Sbjct: 89  VFRLDHGGEVDADGNCLFTAARTAAAAKADARE-LRHRAVRRFAEVYAAAGEDDKNAVDA 147

Query: 466 AIKHLYSPDLNSGWGVHVVQEVKLLAKKVDREAMDTAIEELM 591
           A++HLY+PDL +GWGVHVVQE+K+L  K  R A+D+AI+EL+
Sbjct: 148 AVRHLYAPDLKAGWGVHVVQEIKVLVPKAQRHALDSAIQELV 189


>tr|B4FTP8|B4FTP8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 345

 Score =  124 bits (310), Expect = 5e-27
 Identities = 72/163 (44%), Positives = 99/163 (60%), Gaps = 7/163 (4%)
 Frame = +1

Query: 124 LSISEGSPITSLFSDPYPTASWDAVPGLESQQIQALLKLSAKGVFWKHPCKATS------ 285
           L+ S  +P +S  +   PT  WDAV  LE QQ + L ++  +GV WK             
Sbjct: 30  LAWSSPAPASSPEASISPTG-WDAVWALEDQQRRRLHRIWERGVAWKPSSPGAGEAALPP 88

Query: 286 CVFTLHHGGDVEADGNCLFSAAQKAMCLRDECPQAVRKRTVQRFLRDYEN-GVMQKVATD 462
            VF L HGG+V+ADGNCLF+AA+ A   + +  + +R R V+RF   Y   G   K A D
Sbjct: 89  VVFRLDHGGEVDADGNCLFTAARTAAAAKADARE-LRHRAVRRFAEVYAAAGEDDKNAVD 147

Query: 463 QAIKHLYSPDLNSGWGVHVVQEVKLLAKKVDREAMDTAIEELM 591
            A++HLY+PDL +GWGVHVVQE+K+L  K  R A+D+AI+EL+
Sbjct: 148 AAVRHLYAPDLKAGWGVHVVQEIKVLVPKAQRHALDSAIQELV 190


>tr|Q93VY8|Q93VY8_ORYSJ Putative uncharacterized protein P0672D08.44
           (Os01g0102500 protein) (P0402A09.23 protein)
           (P0455C04.17 protein) OS=Oryza sativa subsp. japonica
           GN=P0672D08.44 PE=4 SV=1
          Length = 332

 Score =  123 bits (308), Expect = 9e-27
 Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
 Frame = +1

Query: 166 DPYPTASWDAVPGLESQQIQALLKLSAKGVFWKHPCKAT--SCVFTLHHGGDVEADGNCL 339
           DP P  SW AV  LE QQ + L ++  +GV WK P        VF L H G+V+ADGNCL
Sbjct: 34  DPDPPTSWTAVAALEDQQRRRLHRIWERGVAWKPPATLPLPPLVFRLDHAGEVDADGNCL 93

Query: 340 FSAAQKAMCLRDECPQAVRKRTVQRFLRDYENG-VMQKVATDQAIKHLYSPDLNSGWGVH 516
           F+AA+KA   + +  + +R R V+RF   Y       + A D A++HLY+PDL +GWGVH
Sbjct: 94  FTAARKAASAKPDA-RDLRHRIVRRFSHLYAAAQAPDRDAIDAAVRHLYAPDLKAGWGVH 152

Query: 517 VVQEVKLLAKKVDREAMDTAIEELM 591
           VVQE+KLLA K  R  +D AI +L+
Sbjct: 153 VVQELKLLAPKTLRHHLDAAINDLV 177


>tr|B8ACS1|B8ACS1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00023 PE=4 SV=1
          Length = 332

 Score =  123 bits (308), Expect = 9e-27
 Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
 Frame = +1

Query: 166 DPYPTASWDAVPGLESQQIQALLKLSAKGVFWKHPCKAT--SCVFTLHHGGDVEADGNCL 339
           DP P  SW AV  LE QQ + L ++  +GV WK P        VF L H G+V+ADGNCL
Sbjct: 34  DPDPPTSWTAVAALEDQQRRRLHRIWERGVAWKPPATLPLPPLVFRLDHAGEVDADGNCL 93

Query: 340 FSAAQKAMCLRDECPQAVRKRTVQRFLRDYENG-VMQKVATDQAIKHLYSPDLNSGWGVH 516
           F+AA+KA   + +  + +R R V+RF   Y       + A D A++HLY+PDL +GWGVH
Sbjct: 94  FTAARKAASAKPDA-RDLRHRIVRRFSHLYAAAQAPDRDAIDAAVRHLYAPDLKAGWGVH 152

Query: 517 VVQEVKLLAKKVDREAMDTAIEELM 591
           VVQE+KLLA K  R  +D AI +L+
Sbjct: 153 VVQELKLLAPKTLRHHLDAAINDLV 177


>tr|A2ZN96|A2ZN96_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000018 PE=4 SV=1
          Length = 559

 Score =  123 bits (308), Expect = 9e-27
 Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
 Frame = +1

Query: 166 DPYPTASWDAVPGLESQQIQALLKLSAKGVFWKHPCKAT--SCVFTLHHGGDVEADGNCL 339
           DP P  SW AV  LE QQ + L ++  +GV WK P        VF L H G+V+ADGNCL
Sbjct: 34  DPDPPTSWTAVAALEDQQRRRLHRIWERGVAWKPPATLPLPPLVFRLDHAGEVDADGNCL 93

Query: 340 FSAAQKAMCLRDECPQAVRKRTVQRFLRDYENG-VMQKVATDQAIKHLYSPDLNSGWGVH 516
           F+AA+KA   + +  + +R R V+RF   Y       + A D A++HLY+PDL +GWGVH
Sbjct: 94  FTAARKAASAKPDA-RDLRHRIVRRFSHLYAAAQAPDRDAIDAAVRHLYAPDLKAGWGVH 152

Query: 517 VVQEVKLLAKKVDREAMDTAIEELM 591
           VVQE+KLLA K  R  +D AI +L+
Sbjct: 153 VVQELKLLAPKTLRHHLDAAINDLV 177


>tr|B8B7I9|B8B7I9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26456 PE=4 SV=1
          Length = 966

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
 Frame = +1

Query: 247 KGVFWKHPC--KATSCVFTLHHGGDVEADGNCLFSAAQKAMCLRDECPQAVRKRTVQRFL 420
           +GV WK P      S VF L H G+V  DG+ LF+A  +A   +    + +R R V RF+
Sbjct: 433 RGVTWKLPSLLPLLSLVFRLGHVGEVNTDGSSLFTAIDRATATKPRA-RNLRHRIVHRFV 491

Query: 421 RDYE-NGVMQKVATDQAIKHLYSPDLNSGWGVHVVQEVKLLAKKVDREAMDTAIEELM 591
             Y       +     A++HLY+ DL   WGV+V  E+KLLA K     +D AI  ++
Sbjct: 492 DVYSATHAPNRDTIGAAVRHLYALDLKVSWGVNVAHELKLLAPKSHCHDLDAAINGIV 549


>tr|B1I4Z3|B1I4Z3_DESAP Amylo-alpha-1,6-glucosidase OS=Desulforudis
           audaxviator (strain MP104C) GN=Daud_1533 PE=4 SV=1
          Length = 721

 Score = 35.8 bits (81), Expect = 1.9
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 17/130 (13%)
 Frame = +1

Query: 184 SWDAVPGLESQQIQALLKLSAKGVFWKHPCKATSCVFTL----HHGGDVEADGNCLFSAA 351
           SWDAV   E    +  + L     +W H  +  + +F +    H  G + A+   L    
Sbjct: 437 SWDAVADPEGNLAEPPIALVEVQGYWYHALEHAARLFKVLGDEHGAGRLRAEARRL---- 492

Query: 352 QKAMCLRD-ECPQAV--------RKRTVQRFLRDYEN----GVMQKVATDQAIKHLYSPD 492
            KA  +RD + P           +KR V   + +  +    G++      Q ++ ++ PD
Sbjct: 493 -KARFIRDFQVPGEEYLGFALDGKKRLVSTVVSNMGHCLWSGILDPGPAAQVVRRIFRPD 551

Query: 493 LNSGWGVHVV 522
           ++SGWG+  +
Sbjct: 552 MHSGWGIRTM 561