NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962449
Clone id TST39A01NGRL0013_O13
Library
Length 591
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_O13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCAGCTCACAAGCACAAACTCATGGCGGTGTTACTGCAGCACAAAGACTTATTTCTAAGT
TTGATGATGAGGATAGTGACATAGAGGCGCCTCAAGCCTATATAGCTGATGCTCACAGCA
GCATTTTAGAGACTGATGATGATACACCCTTGGAGCCAGAGCCTGGTAAGCTTTTTGTTG
GAAACTTACCACCTCGCATACAAAGAAGTGTTATCGCAGAGTTTTTTCGCCAGTTTGGCC
CTGTTAAGGATGTCATTTTGATAAAAAGCCAGACTGATCCCCAGAGGAACAAGGGTTACT
GTTTCGTAATCTATGGGGGTCCCACTGCTGTGTCTGCGGCTTTAAAGGCTGCAGAGCTTG
ATGGGGTTGAGTTCCATAGCAAAAATCTGGTTGTGAAGCTGGATGATGGAAGGAGATTAA
AACAGAGAAACGCCCTCAGAAAGCAATGGCTTGCAGATGGAAAAGAAAGTTACCCCTCCC
AATGGCACGAGGAGCGGGAGGAGGCATCAAGAAGTTTCAGAAGATTGCTGGAAAGTAATC
CATCTAATTGGCAGCATGTTTTAGTTGCCTTTGAAAACATTGATAAGCCTA
■■Homology search results ■■ -
sp_hit_id Q0WMY5
Definition sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana
Align length 148
Score (bit) 128.0
E-value 2.0e-29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962449|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_O13, 5'
         (591 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protei...   128   2e-29
sp|Q22037|ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 ...    57   7e-08
sp|Q60990|RBY1B_MOUSE RNA-binding motif protein, Y chromosome, f...    56   1e-07
sp|Q15415|RBY1F_HUMAN RNA-binding motif protein, Y chromosome, f...    52   2e-06
sp|O35698|RBY1A_MOUSE RNA-binding motif protein, Y chromosome, f...    52   2e-06
sp|Q55FQ0|RU17_DICDI U1 small nuclear ribonucleoprotein 70 kDa O...    52   2e-06
sp|A6NEQ0|RBY1E_HUMAN RNA-binding motif protein, Y chromosome, f...    52   3e-06
sp|P0C7P1|RBY1D_HUMAN RNA-binding motif protein, Y chromosome, f...    52   3e-06
sp|A6NDE4|RBY1B_HUMAN RNA-binding motif protein, Y chromosome, f...    52   3e-06
sp|Q15414|RBY1A_HUMAN RNA-binding motif protein, Y chromosome, f...    52   3e-06
sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 OS=Homo sapi...    50   6e-06
sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 OS=Mus muscu...    50   1e-05
sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B OS=Ar...    48   4e-05
sp|Q00916|RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa h...    46   1e-04
sp|P90978|U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit OS=Cae...    45   2e-04
sp|P90727|U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit OS=Cae...    45   2e-04
sp|Q9ZR40|U2A2B_NICPL Splicing factor U2af large subunit B OS=Ni...    45   2e-04
sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ...    45   2e-04
sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A OS=Ar...    45   4e-04
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15...    44   5e-04
sp|Q2QKB4|U2A2B_WHEAT Splicing factor U2af large subunit B OS=Tr...    44   5e-04
sp|Q2QZL4|U2A2B_ORYSJ Splicing factor U2af large subunit B OS=Or...    44   5e-04
sp|Q2QKB3|U2A2A_WHEAT Splicing factor U2af large subunit A OS=Tr...    44   5e-04
sp|Q2R0Q1|U2A2A_ORYSJ Splicing factor U2af large subunit A OS=Or...    44   5e-04
sp|Q08473|SQD_DROME RNA-binding protein squid OS=Drosophila mela...    44   5e-04
sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A OS=Ni...    44   8e-04
sp|Q6AYK1|RNPS1_RAT RNA-binding protein with serine-rich domain ...    44   8e-04
sp|Q5NVM8|RNPS1_PONAB RNA-binding protein with serine-rich domai...    44   8e-04
sp|Q99M28|RNPS1_MOUSE RNA-binding protein with serine-rich domai...    44   8e-04
sp|Q4R5N1|RNPS1_MACFA RNA-binding protein with serine-rich domai...    44   8e-04

>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic OS=Arabidopsis thaliana GN=PPR4
           PE=1 SV=1
          Length = 952

 Score =  128 bits (322), Expect = 2e-29
 Identities = 67/148 (45%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
 Frame = +3

Query: 159 EPGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSA 338
           + GK+FVGNLP  I++    EFFRQFGP+++VILIK   + ++N G+ F+IY    A  +
Sbjct: 163 QEGKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIY---AAEKS 219

Query: 339 ALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKE----SYPSQWHXXXXXX 506
           A+KA E DGVEFH + L VKLDDG+RLK +   R +W+ +G+E    S  S WH      
Sbjct: 220 AMKAVEFDGVEFHGRILTVKLDDGKRLKTKAEQRVRWVEEGEEDTKMSNKSSWHQEREGS 279

Query: 507 XXXXXXXXXXNPSNWQHVLVAFENIDKP 590
                     N  NWQ V+ AFE I KP
Sbjct: 280 RKSLQRILDTNGDNWQAVISAFEKISKP 307


>sp|Q22037|ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1
           OS=Caenorhabditis elegans GN=hrp-1 PE=1 SV=1
          Length = 346

 Score = 57.0 bits (136), Expect = 7e-08
 Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
 Frame = +3

Query: 141 DTPLEPEP-GKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYG 317
           D  LEPE   K+FVG L       ++ EF+ QFG + D+I+++  T  +R++G+ FV + 
Sbjct: 14  DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPT-TKRSRGFGFVTFS 72

Query: 318 GPTAVSAALKAAE--LDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESY 473
           G T V AA+K     +DG     K  V + DD  R +   + ++ +++  +E +
Sbjct: 73  GKTEVDAAMKQRPHIIDGKTVDPKRAVPR-DDKNRSESNVSTKRLYVSGVREDH 125


>sp|Q60990|RBY1B_MOUSE RNA-binding motif protein, Y chromosome,
           family 1 member B OS=Mus musculus GN=Rbmy1b PE=2 SV=2
          Length = 380

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 32/106 (30%), Positives = 59/106 (55%)
 Frame = +3

Query: 159 EPGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSA 338
           +PGK+F+G L  + ++  + E F +FGPV  VIL++ + + ++++G+ F+ +  P     
Sbjct: 6   QPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDR-ETKKSRGFAFLTFRRPADAKN 64

Query: 339 ALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYP 476
           A+K  E++GV          + DG+R+K + A R   L  G +  P
Sbjct: 65  AVK--EMNGV----------ILDGKRIKVKQARRPSSLESGSKKRP 98


>sp|Q15415|RBY1F_HUMAN RNA-binding motif protein, Y chromosome,
           family 1 member F/J OS=Homo sapiens GN=RBMY1F PE=2 SV=2
          Length = 496

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 28/106 (26%), Positives = 55/106 (51%)
 Frame = +3

Query: 162 PGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSAA 341
           PGKLF+G L       ++   F + GP+ +V+LIK +T   +++G+ F+ +  P     A
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRT--SKSRGFAFITFENPADAKNA 64

Query: 342 LKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYPS 479
            K  +++G   H K   +K++  ++   ++  R++  A  +   PS
Sbjct: 65  AK--DMNGTSLHGK--AIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106


>sp|O35698|RBY1A_MOUSE RNA-binding motif protein, Y chromosome,
           family 1 member A1 OS=Mus musculus GN=Rbmy1a1 PE=1 SV=1
          Length = 380

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 31/106 (29%), Positives = 58/106 (54%)
 Frame = +3

Query: 159 EPGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSA 338
           +PGK+F+G L  + ++  + E F +FGPV  VIL++ + + ++++G+ F+ +        
Sbjct: 6   QPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDR-ETKKSRGFAFLTFRRLADAKN 64

Query: 339 ALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYP 476
           A+K  E++GV          + DG+R+K + A R   L  G +  P
Sbjct: 65  AVK--EMNGV----------ILDGKRIKVKQARRPSSLESGSKKRP 98


>sp|Q55FQ0|RU17_DICDI U1 small nuclear ribonucleoprotein 70 kDa
           OS=Dictyostelium discoideum GN=snrnp70 PE=3 SV=1
          Length = 459

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 25/84 (29%), Positives = 47/84 (55%)
 Frame = +3

Query: 171 LFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSAALKA 350
           +FV  +  +  +  +   F QFGP+K + L+K   +P+++ GY F+ +     + AA K 
Sbjct: 101 IFVSRISYKTTQQKLEFEFGQFGPIKSLFLVKDSNNPEKHTGYAFIEFERERDMKAAYKQ 160

Query: 351 AELDGVEFHSKNLVVKLDDGRRLK 422
           A  DG++   + +VV ++ GR +K
Sbjct: 161 A--DGMKIDDRRIVVDIERGRVIK 182


>sp|A6NEQ0|RBY1E_HUMAN RNA-binding motif protein, Y chromosome,
           family 1 member E OS=Homo sapiens GN=RBMY1E PE=2 SV=1
          Length = 496

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 28/106 (26%), Positives = 55/106 (51%)
 Frame = +3

Query: 162 PGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSAA 341
           PGKLF+G L       ++   F + GP+ +V+LIK +T   +++G+ F+ +  P     A
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRT--SKSRGFAFITFENPADAKNA 64

Query: 342 LKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYPS 479
            K  +++G   H K   +K++  ++   ++  R++  A  +   PS
Sbjct: 65  AK--DMNGKSLHGK--AIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106


>sp|P0C7P1|RBY1D_HUMAN RNA-binding motif protein, Y chromosome,
           family 1 member D OS=Homo sapiens GN=RBMY1D PE=2 SV=1
          Length = 496

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 28/106 (26%), Positives = 55/106 (51%)
 Frame = +3

Query: 162 PGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSAA 341
           PGKLF+G L       ++   F + GP+ +V+LIK +T   +++G+ F+ +  P     A
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRT--SKSRGFAFITFENPADAKNA 64

Query: 342 LKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYPS 479
            K  +++G   H K   +K++  ++   ++  R++  A  +   PS
Sbjct: 65  AK--DMNGKSLHGK--AIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106


>sp|A6NDE4|RBY1B_HUMAN RNA-binding motif protein, Y chromosome,
           family 1 member B OS=Homo sapiens GN=RBMY1B PE=2 SV=2
          Length = 496

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 28/106 (26%), Positives = 55/106 (51%)
 Frame = +3

Query: 162 PGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSAA 341
           PGKLF+G L       ++   F + GP+ +V+LIK +T   +++G+ F+ +  P     A
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRT--SKSRGFAFITFENPADAKNA 64

Query: 342 LKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYPS 479
            K  +++G   H K   +K++  ++   ++  R++  A  +   PS
Sbjct: 65  AK--DMNGKSLHGK--AIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106


>sp|Q15414|RBY1A_HUMAN RNA-binding motif protein, Y chromosome,
           family 1 member A1/C OS=Homo sapiens GN=RBMY1A1 PE=1
           SV=1
          Length = 496

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 28/106 (26%), Positives = 55/106 (51%)
 Frame = +3

Query: 162 PGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSAA 341
           PGKLF+G L       ++   F + GP+ +V+LIK +T   +++G+ F+ +  P     A
Sbjct: 7   PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRT--SKSRGFAFITFENPADAKNA 64

Query: 342 LKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYPS 479
            K  +++G   H K   +K++  ++   ++  R++  A  +   PS
Sbjct: 65  AK--DMNGKSLHGK--AIKVEQAKKPSFQSGGRRRPPASSRNRSPS 106
tr_hit_id A7QHV8
Definition tr|A7QHV8|A7QHV8_VITVI Chromosome undetermined scaffold_100, whole genome shotgun sequence OS=Vitis vinifera
Align length 144
Score (bit) 145.0
E-value 2.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962449|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_O13, 5'
         (591 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QHV8|A7QHV8_VITVI Chromosome undetermined scaffold_100, who...   145   2e-33
tr|A9SZZ6|A9SZZ6_PHYPA Predicted protein OS=Physcomitrella paten...   138   2e-31
tr|Q259U0|Q259U0_ORYSA H0913C04.4 protein OS=Oryza sativa GN=H09...   135   1e-30
tr|Q0J8W3|Q0J8W3_ORYSJ Os04g0684500 protein OS=Oryza sativa subs...   135   1e-30
tr|A2XZ48|A2XZ48_ORYSI Putative uncharacterized protein OS=Oryza...   135   1e-30
tr|Q7XPU8|Q7XPU8_ORYSJ OSJNBa0088H09.8 protein OS=Oryza sativa s...   133   9e-30
tr|Q1G1I8|Q1G1I8_MAIZE Pentatricopeptide repeat protein OS=Zea m...   124   5e-27
tr|A9SC54|A9SC54_PHYPA Predicted protein (Fragment) OS=Physcomit...    95   3e-18
tr|A3AYT1|A3AYT1_ORYSJ Putative uncharacterized protein OS=Oryza...    95   3e-18
tr|B6TAS3|B6TAS3_MAIZE RNA-binding protein OS=Zea mays PE=2 SV=1       57   8e-07
tr|B4FK28|B4FK28_MAIZE Putative uncharacterized protein OS=Zea m...    57   8e-07
tr|Q7PUN6|Q7PUN6_ANOGA AGAP001993-PA (Fragment) OS=Anopheles gam...    55   2e-06
tr|B5DXX9|B5DXX9_DROPS GA27393 OS=Drosophila pseudoobscura pseud...    55   2e-06
tr|B4NJE1|B4NJE1_DROWI GK12850 OS=Drosophila willistoni GN=GK128...    55   2e-06
tr|B4K4W8|B4K4W8_DROMO GI22407 OS=Drosophila mojavensis GN=GI224...    55   2e-06
tr|Q9VBQ1|Q9VBQ1_DROME Musashi, isoform A OS=Drosophila melanoga...    55   3e-06
tr|Q8MS04|Q8MS04_DROME RH49436p OS=Drosophila melanogaster GN=ms...    55   3e-06
tr|Q8IMS8|Q8IMS8_DROME Musashi, isoform B OS=Drosophila melanoga...    55   3e-06
tr|B4PTJ1|B4PTJ1_DROYA GE23609 OS=Drosophila yakuba GN=GE23609 P...    55   3e-06
tr|B4JHK9|B4JHK9_DROGR GH18982 OS=Drosophila grimshawi GN=GH1898...    55   3e-06
tr|B4ICA8|B4ICA8_DROSE GM10251 OS=Drosophila sechellia GN=GM1025...    55   3e-06
tr|B3P6H8|B3P6H8_DROER GG11413 OS=Drosophila erecta GN=GG11413 P...    55   3e-06
tr|B3LZ18|B3LZ18_DROAN GF17697 OS=Drosophila ananassae GN=GF1769...    55   3e-06
tr|A8WZN4|A8WZN4_CAEBR CBR-HRP-1 protein (Fragment) OS=Caenorhab...    55   3e-06
tr|Q5RF23|Q5RF23_PONAB Putative uncharacterized protein DKFZp469...    55   4e-06
tr|Q177R3|Q177R3_AEDAE Heterogeneous nuclear ribonucleoprotein O...    55   4e-06
tr|B0WJW1|B0WJW1_CULQU Heterogeneous nuclear ribonucleoprotein O...    55   4e-06
tr|A6NDC0|A6NDC0_HUMAN Putative uncharacterized protein RBM3 OS=...    55   4e-06
tr|Q3ZBA4|Q3ZBA4_BOVIN RNA binding motif (RNP1, RRM) protein 3 O...    54   9e-06
tr|Q9VPK4|Q9VPK4_DROME CG11454 OS=Drosophila melanogaster GN=CG1...    53   1e-05

>tr|A7QHV8|A7QHV8_VITVI Chromosome undetermined scaffold_100, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00013814001 PE=4 SV=1
          Length = 929

 Score =  145 bits (366), Expect = 2e-33
 Identities = 70/144 (48%), Positives = 92/144 (63%)
 Frame = +3

Query: 159 EPGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSA 338
           + GK+FVGNLP  ++++ ++EFFRQFGP+++VILIK   D QRN G+ FVIYGGP A  +
Sbjct: 144 QEGKIFVGNLPNWVKKNEVSEFFRQFGPIENVILIKGHNDNQRNAGFGFVIYGGPMASGS 203

Query: 339 ALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYPSQWHXXXXXXXXXX 518
           A++A E DGVEFH + L VKLDDGRRL+ R+  R +W+        S+WH          
Sbjct: 204 AMRAVEFDGVEFHGRVLTVKLDDGRRLRGRSEERARWVQGHGVDQRSKWHEERESSRKDF 263

Query: 519 XXXXXXNPSNWQHVLVAFENIDKP 590
                  P NWQ V+ AFE I KP
Sbjct: 264 RKVLETEPENWQAVVQAFERIKKP 287


>tr|A9SZZ6|A9SZZ6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_190279 PE=4 SV=1
          Length = 831

 Score =  138 bits (348), Expect = 2e-31
 Identities = 66/149 (44%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
 Frame = +3

Query: 147 PLEPEPGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPT 326
           PLE +PGK+F+GNLP  ++R+ + EFF Q GPV+D+I I+S TDP++NKG+CF+ +GGP 
Sbjct: 42  PLEGDPGKVFIGNLPYHVKRADVKEFFSQCGPVRDIIFIRSHTDPEKNKGFCFLFFGGPD 101

Query: 327 AVSAALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADGKESYP-SQWHXXXXX 503
             +AA +AAELDG  F  K + VK+DDGR  + R   R++W+  G E  P S WH     
Sbjct: 102 PNAAASRAAELDGANFFGKPMRVKIDDGRWERDRREQRERWIESGAEREPRSDWHVEREK 161

Query: 504 XXXXXXXXXXXNPSNWQHVLVAFENIDKP 590
                      +P + + V+ AF+ I KP
Sbjct: 162 ASKGFRNLVEDHPKDARKVVDAFKRIKKP 190


>tr|Q259U0|Q259U0_ORYSA H0913C04.4 protein OS=Oryza sativa
           GN=H0913C04.4 PE=4 SV=1
          Length = 900

 Score =  135 bits (341), Expect = 1e-30
 Identities = 72/169 (42%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
 Frame = +3

Query: 132 TDDDTPLEPEP---------------GKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIK 266
           T   TP  PEP               GK+FVGNLP   +++ IAEFFRQFGP++ V L++
Sbjct: 93  TTTTTPPPPEPEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVR 152

Query: 267 SQTDPQRNKGYCFVIYGGPTAVSAALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQ 446
              DP+RN G+CF+ YGG  A +AA +A E+DGV+F  ++L V+LDDGR+ + R   R +
Sbjct: 153 GHDDPERNVGFCFLYYGGDDADAAAERAVEVDGVDFRGRSLTVRLDDGRKGRARAEQRAR 212

Query: 447 WLADGKESYP-SQWHXXXXXXXXXXXXXXXXNPSNWQHVLVAFENIDKP 590
           W+ DG+   P S WH                 P NWQ V+ AFE I KP
Sbjct: 213 WVNDGRRREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKP 261


>tr|Q0J8W3|Q0J8W3_ORYSJ Os04g0684500 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0684500 PE=4 SV=1
          Length = 901

 Score =  135 bits (341), Expect = 1e-30
 Identities = 72/169 (42%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
 Frame = +3

Query: 132 TDDDTPLEPEP---------------GKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIK 266
           T   TP  PEP               GK+FVGNLP   +++ IAEFFRQFGP++ V L++
Sbjct: 94  TTTTTPPPPEPEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVR 153

Query: 267 SQTDPQRNKGYCFVIYGGPTAVSAALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQ 446
              DP+RN G+CF+ YGG  A +AA +A E+DGV+F  ++L V+LDDGR+ + R   R +
Sbjct: 154 GHDDPERNVGFCFLYYGGDDADAAAERAVEVDGVDFRGRSLTVRLDDGRKGRARAEQRAR 213

Query: 447 WLADGKESYP-SQWHXXXXXXXXXXXXXXXXNPSNWQHVLVAFENIDKP 590
           W+ DG+   P S WH                 P NWQ V+ AFE I KP
Sbjct: 214 WVNDGRRREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKP 262


>tr|A2XZ48|A2XZ48_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_17985 PE=4 SV=1
          Length = 900

 Score =  135 bits (341), Expect = 1e-30
 Identities = 72/169 (42%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
 Frame = +3

Query: 132 TDDDTPLEPEP---------------GKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIK 266
           T   TP  PEP               GK+FVGNLP   +++ IAEFFRQFGP++ V L++
Sbjct: 93  TTTTTPPPPEPEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVR 152

Query: 267 SQTDPQRNKGYCFVIYGGPTAVSAALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQ 446
              DP+RN G+CF+ YGG  A +AA +A E+DGV+F  ++L V+LDDGR+ + R   R +
Sbjct: 153 GHDDPERNVGFCFLYYGGDDADAAAERAVEVDGVDFRGRSLTVRLDDGRKGRARAEQRAR 212

Query: 447 WLADGKESYP-SQWHXXXXXXXXXXXXXXXXNPSNWQHVLVAFENIDKP 590
           W+ DG+   P S WH                 P NWQ V+ AFE I KP
Sbjct: 213 WVNDGRRREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKP 261


>tr|Q7XPU8|Q7XPU8_ORYSJ OSJNBa0088H09.8 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0088H09.8 PE=4 SV=1
          Length = 905

 Score =  133 bits (334), Expect = 9e-30
 Identities = 71/168 (42%), Positives = 95/168 (56%), Gaps = 16/168 (9%)
 Frame = +3

Query: 132 TDDDTPLEPEP---------------GKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIK 266
           T   TP  PEP               GK+FVGNLP   +++ IAEFFRQFGP++ V L++
Sbjct: 94  TTTTTPPPPEPEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVR 153

Query: 267 SQTDPQRNKGYCFVIYGGPTAVSAALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQ 446
              DP+RN G+CF+ YGG  A +AA +A E+DGV+F  ++L V+LDDGR+ + R   R +
Sbjct: 154 GHDDPERNVGFCFLYYGGDDADAAAERAVEVDGVDFRGRSLTVRLDDGRKGRARAEQRAR 213

Query: 447 WLADGKESYP-SQWHXXXXXXXXXXXXXXXXNPSNWQHVLVAFENIDK 587
           W+ DG+   P S WH                 P NWQ V+ AFE I K
Sbjct: 214 WVNDGRRREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPK 261


>tr|Q1G1I8|Q1G1I8_MAIZE Pentatricopeptide repeat protein OS=Zea mays
           PE=2 SV=1
          Length = 886

 Score =  124 bits (310), Expect = 5e-27
 Identities = 64/145 (44%), Positives = 85/145 (58%), Gaps = 1/145 (0%)
 Frame = +3

Query: 159 EPGKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSA 338
           + GK+FVGNLP   ++  IAEFFRQFGP++ V L++   DP+RN G+CF+ YGG    +A
Sbjct: 105 QKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDPEAA 164

Query: 339 ALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQWLADG-KESYPSQWHXXXXXXXXX 515
           A +A E+DGVEF  K L V+LDDGR+ + R   R +W+  G      S WH         
Sbjct: 165 AGRAVEVDGVEFRGKLLTVRLDDGRKGRARAEERARWVEAGVVREASSPWHKGREDACRE 224

Query: 516 XXXXXXXNPSNWQHVLVAFENIDKP 590
                   P +WQ V+ AFE I KP
Sbjct: 225 FRRVLESRPEDWQAVVSAFERIPKP 249


>tr|A9SC54|A9SC54_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_12664 PE=4 SV=1
          Length = 727

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 42/81 (51%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
 Frame = +3

Query: 165 GKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNK-GYCFVIYGGPTAVSAA 341
           GK+FVGNLP  +++  + EFF + GPV+D+ L+++ +DPQ+ K GYCF+ +GGP   SAA
Sbjct: 1   GKIFVGNLPHYVKKEAVQEFFSKCGPVQDIFLVRNNSDPQKKKRGYCFLFFGGPDPHSAA 60

Query: 342 LKAAELDGVEFHSKNLVVKLD 404
           ++A ELDG EF+ K L VK+D
Sbjct: 61  MRAVELDGAEFYGKLLRVKVD 81


>tr|A3AYT1|A3AYT1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_015953 PE=4 SV=1
          Length = 879

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 61/169 (36%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
 Frame = +3

Query: 132 TDDDTPLEPEP---------------GKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIK 266
           T   TP  PEP               GK+FVGNLP   +++ IAEFFRQFGP  +     
Sbjct: 94  TTTTTPPPPEPEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPPGE----- 148

Query: 267 SQTDPQRNKGYCFVIYGGPTAVSAALKAAELDGVEFHSKNLVVKLDDGRRLKQRNALRKQ 446
                            G  A +AA +A E+DGV+F  ++L V+LDDGR+ + R   R +
Sbjct: 149 -----------------GDDADAAAERAVEVDGVDFRGRSLTVRLDDGRKGRARAEQRAR 191

Query: 447 WLADGKESYP-SQWHXXXXXXXXXXXXXXXXNPSNWQHVLVAFENIDKP 590
           W+ DG+   P S WH                 P NWQ V+ AFE I KP
Sbjct: 192 WVNDGRRREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKP 240


>tr|B6TAS3|B6TAS3_MAIZE RNA-binding protein OS=Zea mays PE=2 SV=1
          Length = 469

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
 Frame = +3

Query: 33  TAAQRL-ISKFDDEDSDIEAPQAYIADAHSSILETDDDTPLEPEPG---KLFVGNLPPRI 200
           T A+R+ I K   +   +EA +A   D HS + +++  +   P PG   K+FVG LP  +
Sbjct: 60  TVAERVTIEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNV 119

Query: 201 QRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPTAVSAALKAA--ELDGVEF 374
             +    +F QFG + DV+++    + QR +G+ F+ Y    AV  AL  +  EL+G   
Sbjct: 120 TEADFRGYFEQFGVITDVVVMYDH-NTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMV 178

Query: 375 HSKNLVVK 398
             K  V K
Sbjct: 179 EVKKAVPK 186



 Score = 37.4 bits (85), Expect = 0.64
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +3

Query: 165 GKLFVGNLPPRIQRSVIAEFFRQFGPVKDVILIKSQTDPQRNKGYCFVIYGGPT-AVSAA 341
           GKLFVG +        + E+F +FG V + ++++ ++   R +G+ FV++   T A    
Sbjct: 8   GKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRS-TGRARGFGFVVFADATVAERVT 66

Query: 342 LKAAELDGVEFHSKNLVVKLD 404
           ++   +DG    +K  V + D
Sbjct: 67  IEKHMIDGRMVEAKKAVPRDD 87