DK962465
Clone id TST39A01NGRL0013_P06
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_P06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCTTCACATCTCTCTCTCTCTCTGTCTCTGTCTCTCGCTGTCCTCCTCGTCACACACGAT
ACCACATACAAAAAAAGACAGCTGTTTCGTGCGGCAATGCGTACACCAAAGCCTTTCTCC
ATTGGTGCGGCCAGACCGTCTCGTGCTTTTCAATAAGAAATCTTCTTTCCGTTAAAGGGA
AACCCTACCTCTCAAATGCATTCAAAGCAATGGAATTCCCCCAGCGTCAGCTAGTAGGAG
CAGGTGTACCGTGTAACACATGTTTCATAGGTCTACACAAACAAGGCTGCTTTCATGAAG
ATCATGTAGACGTGCTGTGCACAGCCTACTTCAGTGCAAGCATGTAGGGTTCTTTGCTGC
GTGTCCGCTTTTTTGCAGCGTACTAAAAACTGCAGCCTCAATGGCGGTCTGCACGCTTAA
TTTGCCCAAGAGAGCTAACAGAGCGCCTTTCAGCCCTTGCTTTAGAAGAGAGGAGCTTTG
CTACTGCACGGAAGAATTAGGCTCAGAGAGCATAAGCTGCCGGAGCGGCACAACAGAAGG
TACAAAAGCTGCCACGCAGAATCATGGCCACCATGGAAGCTACCGAGCAGCATATTGTGG
GCACCATGACAGCGATGTGGTAAGAGCCGCTGCTAAAGGCACATGGCAGAAGGCATATAT
GTCTG
■■Homology search results ■■ -
sp_hit_id Q6ZW35
Definition sp|Q6ZW35|U627C_HUMAN UPF0627 protein ENSP00000358171 OS=Homo sapiens
Align length 73
Score (bit) 32.3
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962465|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_P06, 5'
(665 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZW35|U627C_HUMAN UPF0627 protein ENSP00000358171 OS=Homo sa... 32 2.3
sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [U... 32 3.0
sp|Q03132|ERYA2_SACER Erythronolide synthase, modules 3 and 4 OS... 31 6.7

>sp|Q6ZW35|U627C_HUMAN UPF0627 protein ENSP00000358171 OS=Homo
sapiens PE=2 SV=1
Length = 169

Score = 32.3 bits (72), Expect = 2.3
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +2

Query: 359 ACPLFCSVL-----KTAASMAVCTLNLPKRANRAPFS-PCFRREELCYCTEELGSESISC 520
ACP+ C +L A ++CT P + RA ++ P REE + TE +G E
Sbjct: 24 ACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWAGPRASREEGTFWTEPVGQERRLI 83

Query: 521 RSGTTEGTKAATQ 559
RSG+++ Q
Sbjct: 84 RSGSSQNESQEDQ 96


>sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase
[UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1
SV=2
Length = 860

Score = 32.0 bits (71), Expect = 3.0
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1

Query: 422 N*ACRPPLRLQFLVRCKKADTQQRTLHACTEVG-CAQHVYMIFMKAALFV*TYETCVTRY 246
N CR L F+V K +T C ++G A+H Y + ++ A+ +E CV
Sbjct: 632 NTLCRDKGNLVFIVSAKSRETLSDWFSPCEKLGIAAEHGYFLRLRKAV---EWENCVAAV 688

Query: 245 TCSY 234
CS+
Sbjct: 689 DCSW 692


>sp|Q03132|ERYA2_SACER Erythronolide synthase, modules 3 and 4
OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3
Length = 3567

Score = 30.8 bits (68), Expect = 6.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1

Query: 517 LPERHNRRYKSCHAESWPPWKLP 585
L E H R +SC + +W PW LP
Sbjct: 1277 LAEHHRARGRSCTSVAWTPWALP 1299


tr_hit_id Q5LRW9
Definition tr|Q5LRW9|Q5LRW9_SILPO Acetylpolyamine aminohydrolase OS=Silicibacter pomeroyi
Align length 107
Score (bit) 34.7
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962465|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_P06, 5'
(665 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5LRW9|Q5LRW9_SILPO Acetylpolyamine aminohydrolase OS=Silicib... 35 5.5

>tr|Q5LRW9|Q5LRW9_SILPO Acetylpolyamine aminohydrolase
OS=Silicibacter pomeroyi GN=SPO2002 PE=4 SV=1
Length = 341

Score = 34.7 bits (78), Expect = 5.5
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 7/107 (6%)
Frame = +2

Query: 365 PLFCSVLKTAASMAVCTLNLPKRANRAPFSPCFRREELCYCTEELGSESISCRSGTTEGT 544
P VL+ A A C P A P + E L + ++I R G
Sbjct: 30 PRRIEVLRAGAEAAGCVFAAPGDAGLGPIAALHSPEYLTFL------QTIHARWRRIPGA 83

Query: 545 KAATQNHGHHGSYRAAY-------CGHHDSDVVRAAAKGTWQKAYMS 664
A + H G+ Y G+H +D A+GTW+ AY S
Sbjct: 84 GAEVIPNIHPGARTDGYPKSAVGQAGYHQADTACPIAEGTWEAAYWS 130