DK962480 |
Clone id |
TST39A01NGRL0013_P21 |
Library |
TST39 |
Length |
643 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_P21. 5' end sequence. |
Accession |
DK962480 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL201Contig1 |
Sequence |
ATTAGCGAAGCCAGGTGAAGTCCAAACACAGACACGCACAGACAGAAGGAGGTTTCTACG AGCGAGTGAGCAACGTGTCCATGGCTGCCTCAACCTCTGCTGCTCTCTCCTTCTCAAACT TGGCGGCCGCGCGCTCCTCCTCCCTCACAGGTTCCCCTTTGAGCTCCACGAGGACACCTG CAAATGTGAAGACTCAGGCCCCCTTGACATGCCGAGCCCAGAAAGCTTCAGATGGGGAGG CCCCTGCGGCGCCTATCTCTAGACGTGCTGTGATCTCCATAGCCGCCGCTGCTGCAGCTG CTGTTGCTGCCGTCTCCGCGCCCATTTACCCCGCGGAGGCAGCATATGGTGAATCAGCAA ATATCTTTGGTGCTCCCAAGTTTGACTCGGGGTTTGTTCCCTTCTCTGGCAATGGCTTCT CTGTAAATATTCCATCAAAGTGGAACCCTAGCAAGGAGCAAGAGTTCCCTGGCACTGTAT TGCGCTATGAGGACAATTTTGATGCAAACAGCAACTTGGCAGTTATGGTTTTACCAGAAG GCAAGACCTCAATCAAGGACTACGGATCACCGGAGAAGTTTTTGGAATCTGTGTCGTACC TTCTGGGCAAGCAAGCCTACAGTGGCAACACAGCGTCGGAGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SLQ8 |
Definition |
sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus |
Align length |
102 |
Score (bit) |
155.0 |
E-value |
1.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962480|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_P21, 5' (643 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chlorop... 155 1e-37 sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chlo... 150 4e-36 sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chlorop... 149 2e-35 sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chlorop... 147 4e-35 sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chlorop... 146 8e-35 sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chlorop... 146 8e-35 sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chlorop... 146 1e-34 sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chlorop... 145 2e-34 sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chlorop... 145 2e-34 sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chlo... 141 3e-33 sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chlo... 141 3e-33 sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chlo... 141 3e-33 sp|P11471|PSBP_CHLRE Oxygen-evolving enhancer protein 2, chlorop... 140 7e-33 sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloropla... 139 1e-32 sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chlorop... 139 2e-32 sp|O49344|PSBP2_ARATH Putative oxygen-evolving enhancer protein ... 58 5e-08 sp|P80660|PSBP1_PHYPA Oxygen-evolving enhancer protein 2 (Fragme... 39 0.018 sp|P83687|PSBP_EUGGR Oxygen-evolving enhancer protein 2 (Fragmen... 31 4.8 sp|Q3URS3|YL022_MOUSE Uncharacterized protein LOC645277 homolog ... 31 6.3
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1 Length = 263
Score = 155 bits (393), Expect = 1e-37 Identities = 70/102 (68%), Positives = 88/102 (86%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGE+AN+FG PK ++ ++P+SG+GF ++IPSKWNPSKE+EFPG VLRYEDNFD+NSN Sbjct: 76 DAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSN 135
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 L+V++ P K SIKD+GSPE+FL V YLLGKQAY G TASE Sbjct: 136 LSVIINPTDKKSIKDFGSPEEFLSKVDYLLGKQAYFGKTASE 177
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2 Length = 263
Score = 150 bits (380), Expect = 4e-36 Identities = 69/102 (67%), Positives = 84/102 (82%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGE+AN+FG PK ++ F+P++G+GF V +P+KWNPSKE E+PG VLR+EDNFDA SN Sbjct: 76 DAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSN 135
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 L VMV P K SI DYGSPE+FL V+YLLGKQAY G TASE Sbjct: 136 LNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASE 177
>sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2 Length = 260
Score = 149 bits (375), Expect = 2e-35 Identities = 69/102 (67%), Positives = 82/102 (80%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGE+AN+FG PK ++ F +SG+GF V +P+KWNPS+E E+PG VLRYEDNFDA SN Sbjct: 73 DAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSN 132
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 L VMV P K SI DYGSPE+FL V+YLLGKQAY G TASE Sbjct: 133 LNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASE 174
>sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1 Length = 267
Score = 147 bits (372), Expect = 4e-35 Identities = 68/102 (66%), Positives = 83/102 (81%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGE+AN+FG PK ++ F+P++G+GF + +PSKWNPSKE+EFPG VLRYEDNFDA SN Sbjct: 80 DAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSN 139
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 L+V+V P K SI D+GSPE FL V YLLGKQAY G T SE Sbjct: 140 LSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSE 181
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1 Length = 260
Score = 146 bits (369), Expect = 8e-35 Identities = 68/102 (66%), Positives = 81/102 (79%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGE+AN+FG PK ++ F+P++G+GF + IP+KWNPSKE EFPG VLRYEDNFD+ SN Sbjct: 73 DAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSN 132
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 L V V P K SI DYGSPE+FL V YLLGKQAY G T SE Sbjct: 133 LMVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSE 174
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1 Length = 265
Score = 146 bits (369), Expect = 8e-35 Identities = 70/102 (68%), Positives = 79/102 (77%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGESAN+FG PK ++ F +G+GF + IPSKWNPSKE EFPG VLRYEDNFD SN Sbjct: 78 DAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSN 137
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 + VMV P K SIKDYGSPE+FL V YLLGKQAY G T SE Sbjct: 138 VGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGKTISE 179
>sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis GN=PSBP PE=2 SV=1 Length = 264
Score = 146 bits (368), Expect = 1e-34 Identities = 67/101 (66%), Positives = 83/101 (82%) Frame = +3
Query: 339 AAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSNL 518 AAYGE+AN+FG K ++ F+P++G+GF++ IP+KWNPSKE EFPG VLRYEDNFD SN+ Sbjct: 78 AAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNV 137
Query: 519 AVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 +V V P K SI DYG+PE+FL +V YLLGKQAYSG TASE Sbjct: 138 SVTVTPTSKKSITDYGTPEEFLSTVDYLLGKQAYSGKTASE 178
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1 Length = 258
Score = 145 bits (366), Expect = 2e-34 Identities = 66/102 (64%), Positives = 81/102 (79%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGE+AN+FG PK ++ F+P++G+GF + +P+KWNPSKE E+PG VLRYEDNFD+ SN Sbjct: 71 DAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSN 130
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 L V V P K SI DYGSPE+FL V YLLGKQAY G T SE Sbjct: 131 LIVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSE 172
>sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1 Length = 217
Score = 145 bits (365), Expect = 2e-34 Identities = 67/102 (65%), Positives = 80/102 (78%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGE+AN+FG PK ++ F +G+GF V +P+KWNPS+E E+PG VLRYEDNFDA SN Sbjct: 30 DAAYGEAANVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSN 89
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 L VMV P K SI DYGSPE+FL V+YLLGKQAY G TA E Sbjct: 90 LNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETACE 131
>sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum GN=PSBP3 PE=2 SV=1 Length = 266
Score = 141 bits (356), Expect = 3e-33 Identities = 64/102 (62%), Positives = 80/102 (78%) Frame = +3
Query: 336 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 515 +AAYGE+AN+FG PK D+ F ++G+GF + IPSKWNP+KE E+PG VLR+EDNFDA SN Sbjct: 79 DAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSN 138
Query: 516 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSGNTASE 641 + V + P K SI D+GSPE+FL V YLLG+QAYSG T SE Sbjct: 139 VIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSE 180
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SY12 |
Definition |
tr|A9SY12|A9SY12_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
101 |
Score (bit) |
160.0 |
E-value |
8.0e-38 |
Report |
|