DK962504 |
Clone id |
TST39A01NGRL0014_A21 |
Library |
TST39 |
Length |
649 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_A21. 5' end sequence. |
Accession |
DK962504 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL291Contig1 |
Sequence |
GCTCGATTCATCCAGGGATACATGGGTGGAGGAGCAATGATTCGTGGCATGGCACGATTG ATGGGGGTCGCAGCAGCAGGGACTGCTGCAATGGCTCCATCATCTTCTCCAGCTTTCTGC CATGCTTCGACGCAAGAACATTCAGCCAACATGCCATCTGCGCTACATCTGTCTCAGAAG GAGGCTTCTTCTGGAGGTGTCCCTTCTGACATGCGATTCCTCAATGCAGATGACTTGGAA TATTCTTCAGATGAGGATTGGGGCAAACTCTCTTACAATCGCCTTGTATTTTCCACTGCT CCCTCGGAAGAGGAAGTTGAAGAGGCCACCAAAGAGCTACATGCTGCTCTTCATCTCTCC ATTCCTGCCTCTAGTTCTGTGGAAAAAGAGAGCCCAACCATGCCTGTGGTGGAGAATGAG GAGAAAGAATTTGTTCCGGCCATTGTGAATCAAGAGAGGGCAACAGAGGAACAGCTTCCA TCTTTGTCTGCTGGCCTGGGTCTGCTTGCTGCAGGAAGCAGCTCTGTTTATCAAGCATTT CATTTATTGCAGACTAACTCCAAGGTCCAGGATGCAGTCAAATCGCTTGCTCGTGATCCG GCAATCTGGAAAGCAGTTTTAAGCAACGAAAAGGTTTTGGAGCTCACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5TGJ6 |
Definition |
sp|Q5TGJ6|HDGL1_HUMAN Hepatoma-derived growth factor-like protein 1 OS=Homo sapiens |
Align length |
59 |
Score (bit) |
35.0 |
E-value |
0.34 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SL01 |
Definition |
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
201 |
Score (bit) |
63.2 |
E-value |
1.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962504|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_A21, 5' (649 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08 tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea... 63 1e-08 tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea m... 60 1e-07 tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromos... 60 1e-07 tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea... 59 3e-07 tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella paten... 58 6e-07 tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subs... 52 3e-05 tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 51 5e-05 tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome... 49 3e-04 tr|A7Q5B8|A7Q5B8_VITVI Chromosome undetermined scaffold_52, whol... 46 0.002 tr|Q9FKH0|Q9FKH0_ARATH Genomic DNA, chromosome 5, TAC clone:K11J... 45 0.003 tr|A9NUF8|A9NUF8_PICSI Putative uncharacterized protein OS=Picea... 45 0.004 tr|A5BI54|A5BI54_VITVI Putative uncharacterized protein OS=Vitis... 45 0.004 tr|Q01JC7|Q01JC7_ORYSA OSIGBa0122F23.3 protein OS=Oryza sativa G... 44 0.007 tr|A2XW72|A2XW72_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.007 tr|Q7XU30|Q7XU30_ORYSJ Os04g0550700 protein OS=Oryza sativa subs... 44 0.009 tr|B4FKH1|B4FKH1_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.009 tr|A7PKF7|A7PKF7_VITVI Chromosome chr15 scaffold_19, whole genom... 44 0.009 tr|A3AW63|A3AW63_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.009 tr|A9TGP9|A9TGP9_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.011 tr|A6N1C1|A6N1C1_ORYSI Putative uncharacterized protein (Fragmen... 43 0.015 tr|A3BQ82|A3BQ82_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.015 tr|Q10QD3|Q10QD3_ORYSJ Os03g0201000 protein OS=Oryza sativa subs... 42 0.032 tr|A2XDL8|A2XDL8_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.032 tr|A9PAV8|A9PAV8_POPTR Putative uncharacterized protein OS=Popul... 41 0.072 tr|Q949B5|Q949B5_ORYSA Putative uncharacterized protein W1110ERI... 39 0.21 tr|Q6H689|Q6H689_ORYSJ Os02g0657700 protein OS=Oryza sativa subs... 39 0.21 tr|B8AG50|B8AG50_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.21 tr|A3A9S8|A3A9S8_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.21
>tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_229919 PE=4 SV=1 Length = 375
Score = 63.2 bits (152), Expect = 1e-08 Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 26/201 (12%) Frame = +1
Query: 118 CHASTQEHSANMPSALHLS---QKEASSGGVPSDMRF---LNADDLEYSSDEDWGKLSYN 279 C T S P++ ++ E S G +D F L+ +D E++ DED+ Sbjct: 23 CRMCTTTPSLKAPTSARITCDCPSEVHSPGSTTDSGFKQYLDIEDWEFAGDEDY------ 76
Query: 280 RLVFSTAPSEEEVEEATKELHAALHLSI---------------PASSSVEKESPTM--PV 408 LVF T P++ EVEEAT +L AL + + SS EK+ P Sbjct: 77 -LVFGTLPTQGEVEEATSDLQHALQIGLFTNRSSNPLESSLARAGSSGKEKDGAVSRDPK 135
Query: 409 VENEEKEF--VPAIVNQERATEEQLPXXXXXXXXXXXXXXX-VYQAFHLLQTNSKVQDAV 579 V+ E+ + V A+ + L + +AFH Q N ++Q V Sbjct: 136 VDGEDAGYHVVDAVADDWLEPSVALASSSKGKEVAGSGGKSAMLEAFHQFQHNPQIQQMV 195
Query: 580 KSLARDPAIWKAVLSNEKVLE 642 SLA D +W AVL+N+++ E Sbjct: 196 VSLATDKGVWDAVLANDQIKE 216
>tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 63.2 bits (152), Expect = 1e-08 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 9/147 (6%) Frame = +1
Query: 229 DDLEYSSDEDWGKLSYN-----RLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKE 390 DD E++ DE+ + Y+ RL+F + P+++EV+E + AL I P S + + Sbjct: 75 DDWEFTGDEEGFQRHYDDDHHDRLIFGSVPTQKEVQEVVSDFQDALTQGIVPVSGNFNDK 134
Query: 391 ---SPTMPVVENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNS 561 S + V + + +VN ++ E V +AF+LLQ+N Sbjct: 135 TTLSSSSSVYKKSGNKSCGTLVNLDQMERES--HEDNYRIVQKAGHNNVCEAFNLLQSNP 192
Query: 562 KVQDAVKSLARDPAIWKAVLSNEKVLE 642 VQ+ V SLA D +W+A+L NEKV E Sbjct: 193 AVQEMVISLASDKTVWEALLKNEKVTE 219
>tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 315
Score = 60.1 bits (144), Expect = 1e-07 Identities = 47/121 (38%), Positives = 62/121 (51%) Frame = +1
Query: 280 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 459 RLVF+ PS EE EEAT EL A+ + S VE VV+ + KEF + Sbjct: 101 RLVFAP-PSREEAEEATTELRDAIGRAYFNESPVE-------VVKEQNKEF------NKL 146
Query: 460 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVL 639 AT+ +P V QAF LL+++++ Q V SLA D +W AVL NEKV+ Sbjct: 147 ATDAIIPSMPGH----------VVQAFTLLKSSTEAQSVVASLASDRNVWDAVLKNEKVM 196
Query: 640 E 642 E Sbjct: 197 E 197
>tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17 (AT5g54540/MRB17_4) OS=Arabidopsis thaliana GN=At5g54540 PE=2 SV=1 Length = 297
Score = 59.7 bits (143), Expect = 1e-07 Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 3/176 (1%) Frame = +1
Query: 124 ASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAP 303 AS++ SA++ SA+H S +E G + M+ DD E++ +E R+VFS P Sbjct: 44 ASSKPVSASITSAVHPSVEE--DGMI---MQRPVWDDWEFAEEEP-----IPRVVFSKPP 93
Query: 304 SEEEVEEATKELHAALHL---SIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEEQ 474 S EE +EAT++L A++L S P SS+ + S V F + + RA E Sbjct: 94 SLEEAKEATEDLKEAINLVYMSSPKSSAAMEGSNDGGSVSKMLSGFQSS---ENRAVESA 150
Query: 475 LPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVLE 642 +P QAF L N+ Q V S+A DP +W AV+ N+ +++ Sbjct: 151 VPQV-------------ALQAFAFLSENTAAQTVVASIASDPKVWDAVMENKDLMK 193
>tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 58.9 bits (141), Expect = 3e-07 Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 11/146 (7%) Frame = +1
Query: 238 EYSSDEDWGKLSY-NRLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKESPTMPVV 411 E ++++++G + +R+VF AP++EEVEEA +L +L SI S S ES ++P Sbjct: 86 EETNNDNFGHHPFRDRVVFGAAPTKEEVEEAVSDLQGSLAQSILYPSGSQGYESSSLPTA 145
Query: 412 ENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQ---------AFHLLQTNSK 564 + + + +E V Q AF LLQ N Sbjct: 146 VQKNGGSIEVSQCSDSESESSKSVVDWIEPELYLYNHEVVQQLRQNDVLDAFRLLQRNHT 205
Query: 565 VQDAVKSLARDPAIWKAVLSNEKVLE 642 V++ V SL D AIW A+L NEKV+E Sbjct: 206 VREMVISLVSDKAIWDALLKNEKVVE 231
>tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164415 PE=4 SV=1 Length = 352
Score = 57.8 bits (138), Expect = 6e-07 Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 43/219 (19%) Frame = +1
Query: 115 FCHASTQEHSANMPSALHLSQKEASSGGVPSD--MRFLNADDLEYSSDEDW---GKLSYN 279 +CH + +++ P + S K + GG+ + + ++ ++ EDW G + Sbjct: 29 YCHCAPPPNAS--PRSRGASCKCKAVGGIHAHPGLSAVSYGPRQFWDGEDWEIAGDEERD 86
Query: 280 RLVFSTAPSEEEVEEATKELHAALHLSI-------------PASSSVEK----------- 387 VF + P+ EEVEEA+ +L AL L P SSS Sbjct: 87 HYVFGSLPTVEEVEEASSDLQNALRLGFFTPPPPKSEALPKPESSSSRSHPQSPRSSLGP 146
Query: 388 ------ESPTMPVVENEEKEF--------VPAIVNQERATEEQLPXXXXXXXXXXXXXXX 525 E T+ V E+E V +V + E L Sbjct: 147 VLVEATEMSTVTTVGEVEEEVTSNLSPLPVEPLVESKECIESPLYEVATSPKHSGAPSSA 206
Query: 526 VYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVLE 642 + +AF+ Q N +VQ V SLA D AIW AVLSNEK+ E Sbjct: 207 MLEAFYQFQHNPQVQGMVVSLATDKAIWDAVLSNEKIKE 245
>tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subsp. japonica GN=P0455A11.10 PE=4 SV=1 Length = 300
Score = 52.0 bits (123), Expect = 3e-05 Identities = 41/121 (33%), Positives = 59/121 (48%) Frame = +1
Query: 280 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 459 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 104 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 149
Query: 460 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVL 639 + +P V QAF LL+++ + Q V SLA D +W AVL NEKV+ Sbjct: 150 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNEKVM 199
Query: 640 E 642 E Sbjct: 200 E 200
>tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28043 PE=4 SV=1 Length = 240
Score = 52.0 bits (123), Expect = 3e-05 Identities = 41/121 (33%), Positives = 59/121 (48%) Frame = +1
Query: 280 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 459 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 44 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 89
Query: 460 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVL 639 + +P V QAF LL+++ + Q V SLA D +W AVL NEKV+ Sbjct: 90 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNEKVM 139
Query: 640 E 642 E Sbjct: 140 E 140
>tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g10390 PE=4 SV=1 Length = 288
Score = 51.2 bits (121), Expect = 5e-05 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 4/138 (2%) Frame = +1
Query: 241 YSSDEDWGKLSYNRLVFSTAPSEEEVEEATKELHAALHLSIPAS----SSVEKESPTMPV 408 Y++ +DW + +R VF P+ EE AT +L + + A S + + PT + Sbjct: 52 YAAIDDW--VIPDREVFGPVPTHEEAMAATLDLKESFQFAKSAQLEPLPSGDLDVPTKGL 109
Query: 409 VENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSL 588 V +E + + E ++ V QAF +LQ + + Q+ V SL Sbjct: 110 VHSESSQGLIHSKTSEHEDNHEISLVSSGAPGR------VVQAFTMLQDSPEAQEVVASL 163
Query: 589 ARDPAIWKAVLSNEKVLE 642 A D +W AV+ NEKV++ Sbjct: 164 ASDQNVWNAVMRNEKVMK 181
>tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027469001 PE=4 SV=1 Length = 209
Score = 48.9 bits (115), Expect = 3e-04 Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 7/173 (4%) Frame = +1
Query: 145 ANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYN----RLVFSTAPSEE 312 A +P + +S + V DD E++S E+ + R+VF P+ + Sbjct: 8 ATVPVSSVISSAKLGDAPVSVQRPSWELDDWEFASVEEEINIGTGEPLPRVVFGGVPTLQ 67
Query: 313 EVEEATKELHAAL-HLSIPASSSVEKESPTMPVVE--NEEKEFVPAIVNQERATEEQLPX 483 E +EAT EL AL L + S S+ + +++ N + A V T +P Sbjct: 68 EAKEATSELKDALDQLYLSPSRSIRSGVQQLGLLQIANSDHLETKACVATTENTVATVPA 127
Query: 484 XXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEKVLE 642 QAF L+ + Q+ V S+A DP +W AV+ NE ++E Sbjct: 128 H-------------AIQAFAYLKDSPAAQNVVASIASDPNVWSAVMQNEALVE 167
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