DK962509
Clone id TST39A01NGRL0014_B02
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_B02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAAACATTGTGAATTGGGAAGAAGTGCTTGATGTGGGATGCTTCCGGGAAGCATATTATC
TCAACCCTTCTGTGGTTTCACCCATCAGTCACTACACTTTGATGGCTTAATTCTTTGTAG
CCACTGTGCAGCAAGCCGCACAGAGGGTGGAATATATGTTGAGAACTTTTCCTGAAGGAT
TTGTGTGTGTGTGGAAAGCTATTAGGGAATGTGGCAATGAGATTGCAATGTAATGTAGTA
GTTATGTAGCTTGGCGAAACTTGAACAAGCTCTCAGAGTGATGTGTCTGTAAATTGTGTT
GGTATTGAATCATAAGGGCTTGCATTTGACATCGATGCTCCATTACCGTCCTTCCATATC
GACGCATGTTGTTGTCTAATGTTGTGACAGAATTTTGAAGAGAATTGAGCCCCTACCTAA
TGCCAGTGGTTGATTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q7VLN8
Definition sp|Q7VLN8|ARGA_HAEDU Amino-acid acetyltransferase OS=Haemophilus ducreyi
Align length 54
Score (bit) 30.0
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962509|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_B02, 5'
(439 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7VLN8|ARGA_HAEDU Amino-acid acetyltransferase OS=Haemophilus... 30 4.4
sp|O60146|YNSG_SCHPO Uncharacterized transporter C18H10.16 OS=Sc... 29 9.8

>sp|Q7VLN8|ARGA_HAEDU Amino-acid acetyltransferase OS=Haemophilus
ducreyi GN=argA PE=3 SV=1
Length = 437

Score = 30.0 bits (66), Expect = 4.4
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Frame = -1

Query: 334 RCQMQALMIQ------YQHNLQTHHSESLFKFRQAT*LLHY-----IAISLPHS 206
RCQ++ L+ Q Y HN++ S L +QA LHY +++ LPHS
Sbjct: 63 RCQIENLLKQNNISSSYHHNIRVTDSNMLEIIKQAVGGLHYDIFSRLSLRLPHS 116


>sp|O60146|YNSG_SCHPO Uncharacterized transporter C18H10.16
OS=Schizosaccharomyces pombe GN=SPBC18H10.16 PE=1 SV=2
Length = 1050

Score = 28.9 bits (63), Expect = 9.8
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 8/41 (19%)
Frame = -3

Query: 221 LIATFPNSFPHTHKSFRKSSQHIFH--------PLCGLLHS 123
L P THKSFRKS +++ P C L+HS
Sbjct: 1001 LFTVLPAPLADTHKSFRKSEEYVDDLLIFMEGLPPCALIHS 1041


tr_hit_id Q6I5Q8
Definition tr|Q6I5Q8|Q6I5Q8_ORYSJ Putative uncharacterized protein OSJNBa0025P09.3 OS=Oryza sativa subsp. japonica
Align length 72
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962509|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_B02, 5'
(439 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6I5Q8|Q6I5Q8_ORYSJ Putative uncharacterized protein OSJNBa00... 33 9.2

>tr|Q6I5Q8|Q6I5Q8_ORYSJ Putative uncharacterized protein
OSJNBa0025P09.3 OS=Oryza sativa subsp. japonica
GN=OSJNBa0025P09.3 PE=4 SV=1
Length = 287

Score = 32.7 bits (73), Expect = 9.2
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -3

Query: 311 DSIPTQFTDTSL*ELVQVSPSYITTTLHCNLIATFPNSFPHTH--KSFRKSSQHIFHPLC 138
DS +F D L Q SP++ T H + FPN+FP + +SF H F+P C
Sbjct: 2 DSSNQKFIDL----LSQDSPNHAEKTSHNSPPQQFPNNFPQSQFTQSFNPHFLHNFYPFC 57

Query: 137 GLLHSGYKELSH 102
S Y H
Sbjct: 58 S--PSNYPPYGH 67