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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962518
Clone id TST39A01NGRL0014_B11
Library
Length 656
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_B11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCTCTAATGTGGCCACTATCAGTCGGCCTCCGACAATGCCTATTGCAGGGTCTTCATGCT
GCATTTCCCACAGGATCCATTGAAGTTTCTTCTCCTCAACCAAGCATCGAAGGCCATGGC
CGTTACCAGAGGTCTTGCATCTTCCCCTACATCCTTCCGGAAACGGTCTTTCCTCCTCGC
CTTCTTCTTCCTCCTGGCCACCACTCTCCTCATCTTCACGTTTTCTGCGTTCTCCCTCCA
CAATGGCTCCGGGTTAAGCGTGGGATCTGAAAGAGAGACACTGAATTTCACTGGTCAAAG
AGGACTTGTCATGCGCAGGTTAAGTGCTCTGAGGTCGGATCCACTTAAATTGAAGGTAGA
TACACTTTTCAAACAAGCCAACGATCAGATCTCTTTGGTCAATTCGTATGCTTCCTATGC
TCGTAAGAGCAAGCTTGAAATGATGAAGGAGGTGAGGCTTTTCACAGAACAGGCTCAAGG
TTTCATGGAGCTCTTAAATCGTCCTCAGAACAAAGCCCTACTTACTGCCACCACAATCAA
TGTAGGTCACCTCGTGGCTTTTGATACAGAGCTTAAAGAACTGGTCAAAGAGTTCAAAAC
AGCACATGATGGATGCTAGGGAATACTTTGACAGTCAACTCAGGGTTCAAAAACTA
■■Homology search results ■■ -
sp_hit_id Q9LSG3
Definition sp|Q9LSG3|QUA1_ARATH Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana
Align length 94
Score (bit) 67.8
E-value 1.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962518|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_B11, 5'
         (656 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LSG3|QUA1_ARATH Glycosyltransferase QUASIMODO1 OS=Arabidops...    68   1e-13
sp|Q9FWA4|GLTR_ARATH Uncharacterized glycosyltransferase At3g023...    68   5e-11
sp|P23529|APOE_CAVPO Apolipoprotein E OS=Cavia porcellus GN=APOE...    32   2.2  
sp|B4J9U3|EI3F2_DROGR Eukaryotic translation initiation factor 3...    30   8.5  
sp|P53441|CATR_NAEGR Caltractin OS=Naegleria gruberi GN=CTN PE=2...    30   8.5  

>sp|Q9LSG3|QUA1_ARATH Glycosyltransferase QUASIMODO1 OS=Arabidopsis
           thaliana GN=QUA1 PE=1 SV=1
          Length = 559

 Score = 67.8 bits (164), Expect(2) = 1e-13
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = +2

Query: 314 RRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMEL 493
           R +  ++SDPLK ++  + KQA+D  SL  +YASYARK KLE  K VR+F + ++ + +L
Sbjct: 66  RSMLDIKSDPLKPRLIQIRKQADDHRSLALAYASYARKLKLENSKLVRIFADLSRNYTDL 125

Query: 494 LNRPQNKALLTA--TTINVGHLVAFDTELKELVK 589
           +N+P  +AL  +   +I    L  F+ E+KE +K
Sbjct: 126 INKPTYRALYDSDGASIEESVLRQFEKEVKERIK 159



 Score = 28.9 bits (63), Expect(2) = 1e-13
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +3

Query: 567 QSLKNWSKSSKQHMMDAREYFDSQLRVQKL 656
           + +K   K ++Q + +A+E FD+QL++QKL
Sbjct: 152 KEVKERIKMTRQVIAEAKESFDNQLKIQKL 181


>sp|Q9FWA4|GLTR_ARATH Uncharacterized glycosyltransferase At3g02350
           OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1
          Length = 561

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
 Frame = +2

Query: 308 VMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFM 487
           + R   AL+SDPLK ++D + KQA D ++LVN+YA+YARK KL+  K+++LF + A  F 
Sbjct: 67  MQRTFLALQSDPLKTRLDLIHKQAIDHLTLVNAYAAYARKLKLDASKQLKLFEDLAINFS 126

Query: 488 ELLNRPQNKALLT--ATTINVGHLVAFDTELKELVK 589
           +L ++P  K+ ++     +        + E+K+ VK
Sbjct: 127 DLQSKPGLKSAVSDNGNALEEDSFRQLEKEVKDKVK 162


>sp|P23529|APOE_CAVPO Apolipoprotein E OS=Cavia porcellus GN=APOE
           PE=2 SV=1
          Length = 298

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +2

Query: 245 GSGLSVGSERETLNFTGQRGLVMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYAR 424
           G+   V + RE L    ++G    RL AL S PL+ +     +Q   ++  V S A    
Sbjct: 181 GAERGVSAIRERLGSLIEQG----RLQALASQPLQERAQAWGEQMRGRLEKVGSQARDRL 236

Query: 425 KSKLEMMKEVRL-FTEQAQGFMELL 496
           +   E M+EVR+   EQA+ F   L
Sbjct: 237 EEVREQMEEVRVKVEEQAEAFQARL 261


>sp|B4J9U3|EI3F2_DROGR Eukaryotic translation initiation factor 3
           subunit F-2 OS=Drosophila grimshawi GN=eIF3-S5-2 PE=3
           SV=2
          Length = 290

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +2

Query: 374 QANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMEL--LNRPQNK 514
           ++ND I + NSY    +  ++  M++V+L  + A    EL  +N PQ K
Sbjct: 46  RSNDTIEITNSYMVIHKTQQIGEMEQVKLDKQYASEMYELNQINNPQEK 94


>sp|P53441|CATR_NAEGR Caltractin OS=Naegleria gruberi GN=CTN PE=2
           SV=1
          Length = 172

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 23/78 (29%), Positives = 38/78 (48%)
 Frame = +2

Query: 380 NDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMELLNRPQNKALLTATTINVGHLVA 559
           ND + L+ +  S  + S  E+MK  RLF E   GF+   N       L     ++G  + 
Sbjct: 87  NDFLQLMTAKMS-EKDSHAEIMKAFRLFDEDDSGFITFAN-------LKRVAKDLGENMT 138

Query: 560 FDTELKELVKEFKTAHDG 613
            D EL+E+++E   ++ G
Sbjct: 139 -DEELREMIEEADRSNQG 155
tr_hit_id A9P857
Definition tr|A9P857|A9P857_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 94
Score (bit) 76.6
E-value 1.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962518|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_B11, 5'
         (656 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9P857|A9P857_POPTR Putative uncharacterized protein OS=Popul...    77   1e-12
tr|A7PAH6|A7PAH6_VITVI Chromosome chr14 scaffold_9, whole genome...    72   3e-12
tr|A5ASM6|A5ASM6_VITVI Putative uncharacterized protein OS=Vitis...    72   3e-12
tr|Q1KUT2|Q1KUT2_9ROSI Putative uncharacterized protein OS=Cleom...    75   5e-12
tr|Q1KUX6|Q1KUX6_9ROSI Putative uncharacterized protein OS=Cleom...    74   8e-12
tr|A5AFU3|A5AFU3_VITVI Putative uncharacterized protein OS=Vitis...    40   0.096
tr|B6QW65|B6QW65_PENMA Putative uncharacterized protein OS=Penic...    34   6.9  

>tr|A9P857|A9P857_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 554

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 39/94 (41%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = +2

Query: 314 RRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMEL 493
           R + A++SDPLK ++D + KQA+D  SL ++YASYARK KLE  K VR+F + ++ + +L
Sbjct: 61  RSVLAMKSDPLKSRLDQIRKQADDHRSLAHAYASYARKLKLENSKLVRVFADLSRNYTDL 120

Query: 494 LNRPQNKALLTATTINVGH--LVAFDTELKELVK 589
           +N+P  +AL  + ++++    L  F+ E+KE +K
Sbjct: 121 INKPSYRALSESDSLSIDEATLRLFEKEVKERIK 154


>tr|A7PAH6|A7PAH6_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038116001
           PE=4 SV=1
          Length = 543

 Score = 71.6 bits (174), Expect(2) = 3e-12
 Identities = 32/66 (48%), Positives = 50/66 (75%)
 Frame = +2

Query: 308 VMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFM 487
           + R   AL+SDPL+ ++D + KQAND I+LVN+YA+YARK KL++ +++R+F + A+ F 
Sbjct: 64  MQRTFLALKSDPLRTRLDLIHKQANDHITLVNAYAAYARKLKLDISRQLRMFDDLARNFS 123

Query: 488 ELLNRP 505
           +L  RP
Sbjct: 124 DLAARP 129



 Score = 23.9 bits (50), Expect(2) = 3e-12
 Identities = 9/32 (28%), Positives = 23/32 (71%)
 Frame = +3

Query: 561 LIQSLKNWSKSSKQHMMDAREYFDSQLRVQKL 656
           L + +K+  K ++  + +++E +D+Q+++QKL
Sbjct: 151 LEKEVKDRVKIARLMIAESKESYDNQIKIQKL 182


>tr|A5ASM6|A5ASM6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022574 PE=4 SV=1
          Length = 543

 Score = 71.6 bits (174), Expect(2) = 3e-12
 Identities = 32/66 (48%), Positives = 50/66 (75%)
 Frame = +2

Query: 308 VMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFM 487
           + R   AL+SDPL+ ++D + KQAND I+LVN+YA+YARK KL++ +++R+F + A+ F 
Sbjct: 64  MQRTFLALKSDPLRTRLDLIHKQANDHITLVNAYAAYARKLKLDISRQLRMFDDLARNFS 123

Query: 488 ELLNRP 505
           +L  RP
Sbjct: 124 DLAARP 129



 Score = 23.9 bits (50), Expect(2) = 3e-12
 Identities = 9/32 (28%), Positives = 23/32 (71%)
 Frame = +3

Query: 561 LIQSLKNWSKSSKQHMMDAREYFDSQLRVQKL 656
           L + +K+  K ++  + +++E +D+Q+++QKL
Sbjct: 151 LEKEVKDRVKIARLMIAESKESYDNQIKIQKL 182


>tr|Q1KUT2|Q1KUT2_9ROSI Putative uncharacterized protein OS=Cleome
           spinosa PE=4 SV=1
          Length = 528

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 41/95 (43%), Positives = 63/95 (66%)
 Frame = +2

Query: 314 RRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVRLFTEQAQGFMEL 493
           R   AL+SDPLK ++D ++KQA D ++LVN+YA+YARK KL+  K+++LF +    F +L
Sbjct: 71  RTFLALQSDPLKTRLDLIYKQATDHLTLVNAYAAYARKLKLDASKQLKLFEDLGINFSDL 130

Query: 494 LNRPQNKALLTATTINVGHLVAFDTELKELVKEFK 598
             +P  K++L+      G+ V  DT L++L KE K
Sbjct: 131 QYKPDYKSVLSEN----GNAVEEDT-LRQLEKEVK 160


>tr|Q1KUX6|Q1KUX6_9ROSI Putative uncharacterized protein OS=Cleome
           spinosa PE=4 SV=1
          Length = 556

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 45/107 (42%), Positives = 69/107 (64%)
 Frame = +2

Query: 278 TLNFTGQRGLVMRRLSALRSDPLKLKVDTLFKQANDQISLVNSYASYARKSKLEMMKEVR 457
           TL  TG    + R   AL+SDPLK +VD + KQA D ++LVN+YA+YARK K++  K+++
Sbjct: 53  TLPNTGS-AYMHRTFLALQSDPLKTRVDLIHKQATDHLTLVNAYAAYARKLKVDASKQLK 111

Query: 458 LFTEQAQGFMELLNRPQNKALLTATTINVGHLVAFDTELKELVKEFK 598
           LF + A  F +L ++P  K++L+      G+ V  DT L+++ KE K
Sbjct: 112 LFEDLAINFSDLQSKPGLKSVLSEN----GNAVEEDT-LRQVEKEVK 153


>tr|A5AFU3|A5AFU3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_015808 PE=4 SV=1
          Length = 65

 Score = 40.4 bits (93), Expect = 0.096
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +2

Query: 371 KQANDQISLVNSYASYARKSKLEMMKEVRLFTE 469
           KQA D  SL  +YASYARK KLE  K VR+FT+
Sbjct: 29  KQAEDHKSLALAYASYARKLKLENSKLVRVFTD 61


>tr|B6QW65|B6QW65_PENMA Putative uncharacterized protein
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_015150 PE=4
           SV=1
          Length = 599

 Score = 34.3 bits (77), Expect = 6.9
 Identities = 23/89 (25%), Positives = 38/89 (42%)
 Frame = -2

Query: 622 SLASIMCCFELFDQFFKLCIKSHEVTYIDCGGSK*GFVLRTI*ELHETLSLFCEKPHLLH 443
           S   +  C  L+D+++ +CI+S        G +  GF  RT  +L +     C       
Sbjct: 502 SFVGMNACITLYDRWYSICIRSRAKDMAKAGLNDTGFSFRTWFQLKQLSERIC------- 554

Query: 442 HFKLALTSIGSIRIDQRDLIVGLFEKCIY 356
            F +A T  GSI   Q +L     ++ +Y
Sbjct: 555 -FPIAGTVFGSIPAIQAELSHFFTDRLVY 582