DK962521 |
Clone id |
TST39A01NGRL0014_B15 |
Library |
TST39 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_B15. 5' end sequence. |
Accession |
DK962521 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL651Contig1 |
Sequence |
GGGGAAGGCCATCCATCTCTTCTGCAGGCCCTCTCCGCCCCCTTCACGGAATCCCGGCTG GCATTGCCGAACCTGCACCCATGCTTTTCTCTCAGCTCCATTGATTCTTCACCTTTCCTT ACTCTACGCCTGCAGGATAAAGCGTGTTCTTCTTTCTCCCCCACTCCTGTGTACTCCATT GCTACCCGTCTTCTTCATTACTACCCGTCTTCTTCCTCTGCTTCGCCTTCTGCATTCCCC GGTGTGAGTCTCACTGGCAATGGCGGCCACTGCTGCAAGGCTTGACCTCGATGGCAGCGA AATTGCACCCCTCACCATCTGCATGATCGGAGCCGGGGGCTTTATAGGGTCGCATCTTTG CGAGAAGCTAATGTGGGAGACGGAGCACACTGTTCTCGCTATTGACGTGTATAGCGACAA GATCCAGCACCTGTTGGAACCCGGCCAGCCATGGAGCTCTCGCATTGAATTCCACAGGCT CAACATTAAGAACGACCCTCGCTTGGAGGGCCTTATCAAGCTCTCCGATCTGGTGATTAA TCTAGCGGCAATCTGCACTCCGGCTGACTACAACACAAGACCTTTGGATACCATTTACAG CAACTTCACTGATGCTCTTCCAGTGGTTCGATATTGTTCGGATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4KC82 |
Definition |
sp|Q4KC82|ARNA_PSEF5 Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) |
Align length |
111 |
Score (bit) |
62.4 |
E-value |
2.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PQK8 |
Definition |
tr|A7PQK8|A7PQK8_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
127 |
Score (bit) |
215.0 |
E-value |
2.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962521|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_B15, 5' (629 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PQK8|A7PQK8_VITVI Chromosome chr6 scaffold_25, whole genome... 215 2e-54 tr|A7Q660|A7Q660_VITVI Chromosome undetermined scaffold_55, whol... 213 6e-54 tr|Q2I2N3|Q2I2N3_SOLTU UDP-apiose/xylose synthase OS=Solanum tub... 213 1e-53 tr|B4UW57|B4UW57_ARAHY Putative dihydroflavonol reductase (Fragm... 213 1e-53 tr|Q6JJ41|Q6JJ41_IPOTF Putative dihydroflavonol reductase (Putat... 212 2e-53 tr|Q2LAM6|Q2LAM6_9MAGN UDP-D-apiose/UDP-D-xylose synthase OS=Vit... 211 2e-53 tr|B7FI57|B7FI57_MEDTR Putative uncharacterized protein OS=Medic... 211 2e-53 tr|Q6TNI9|Q6TNI9_NICBE UDP-D-apiose/UDP-D-xylose synthase OS=Nic... 210 5e-53 tr|Q6QP37|Q6QP37_MAIZE DTDP-glucose 4,6-dehydratase OS=Zea mays ... 208 2e-52 tr|B6TQB1|B6TQB1_MAIZE Bifunctional polymyxin resistance arnA pr... 208 2e-52 tr|B4FUF3|B4FUF3_MAIZE Bifunctional polymyxin resistance arnA pr... 208 2e-52 tr|A9PEH3|A9PEH3_POPTR Putative uncharacterized protein OS=Popul... 208 2e-52 tr|Q9ZUY6|Q9ZUY6_ARATH Putative dTDP-glucose 4-6-dehydratase (Pu... 207 5e-52 tr|Q8S9Z2|Q8S9Z2_ORYSJ cDNA clone:J023063F13, full insert sequen... 207 5e-52 tr|A3A1Y0|A3A1Y0_ORYSJ Putative uncharacterized protein OS=Oryza... 207 5e-52 tr|A2WZI6|A2WZI6_ORYSI Putative uncharacterized protein OS=Oryza... 207 5e-52 tr|Q9SGE0|Q9SGE0_ARATH T23G18.6 (Similar to dihydroflavonol redu... 206 7e-52 tr|Q94B32|Q94B32_ARATH Similar to dihydroflavonol reductase OS=A... 206 7e-52 tr|Q8L9F5|Q8L9F5_ARATH Putative dTDP-glucose 4-6-dehydratase OS=... 206 7e-52 tr|A9TZ14|A9TZ14_PHYPA Predicted protein OS=Physcomitrella paten... 202 1e-50 tr|A7QFD6|A7QFD6_VITVI Chromosome undetermined scaffold_87, whol... 192 2e-47 tr|A5AI43|A5AI43_VITVI Putative uncharacterized protein OS=Vitis... 192 2e-47 tr|B4F9U8|B4F9U8_MAIZE Putative uncharacterized protein OS=Zea m... 181 4e-44 tr|B6VCR3|B6VCR3_AEGSP Putative bifunctional polymyxin resistanc... 146 1e-33 tr|B6VCR5|B6VCR5_9POAL Putative bifunctional polymyxin resistanc... 145 1e-33 tr|B6VCR4|B6VCR4_TRIMO Putative bifunctional polymyxin resistanc... 145 1e-33 tr|B6VCR2|B6VCR2_SECCE Putative bifunctional polymyxin resistanc... 137 5e-31 tr|A0A961|A0A961_IPOTF Putative uncharacterized protein (Fragmen... 78 5e-13 tr|A6PMH0|A6PMH0_9BACT NAD-dependent epimerase/dehydratase OS=Vi... 64 1e-08 tr|B1EJM4|B1EJM4_9ESCH UDP-glucuronic acid decarboxylase/UDP-4-a... 63 1e-08
>tr|A7PQK8|A7PQK8_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022106001 PE=4 SV=1 Length = 388
Score = 215 bits (547), Expect = 2e-54 Identities = 103/127 (81%), Positives = 115/127 (90%), Gaps = 1/127 (0%) Frame = +2
Query: 251 ATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPG 430 A+AARLDLDG+ I P+TICMIGAGGFIGSHLCEKLM ET H VLA+DVYSDKI+HLLEP Sbjct: 2 ASAARLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVYSDKIKHLLEPS 61
Query: 431 -QPWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALP 607 PWS RI+FHR+NIK+D RLEGLIK++DL INLAAICTPADYNTRPLDTIYSNF DALP Sbjct: 62 THPWSDRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 121
Query: 608 VVRYCSD 628 VV+YCS+ Sbjct: 122 VVKYCSE 128
>tr|A7Q660|A7Q660_VITVI Chromosome undetermined scaffold_55, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031253001 PE=4 SV=1 Length = 388
Score = 213 bits (543), Expect = 6e-54 Identities = 101/127 (79%), Positives = 115/127 (90%), Gaps = 1/127 (0%) Frame = +2
Query: 251 ATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPG 430 A+AARLDLDG+ I P+TICMIGAGGFIGSHLCEKLM ET H VLA+DVY+DKI+HLLEP Sbjct: 2 ASAARLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVYNDKIRHLLEPA 61
Query: 431 -QPWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALP 607 PWS RI+FHR+NIK+D RLEGLIK++DL +NLAAICTPADYNTRPLDTIYSNF DALP Sbjct: 62 AHPWSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDALP 121
Query: 608 VVRYCSD 628 VV+YCS+ Sbjct: 122 VVKYCSE 128
>tr|Q2I2N3|Q2I2N3_SOLTU UDP-apiose/xylose synthase OS=Solanum tuberosum GN=UAXs PE=2 SV=1 Length = 386
Score = 213 bits (541), Expect = 1e-53 Identities = 100/125 (80%), Positives = 113/125 (90%), Gaps = 1/125 (0%) Frame = +2
Query: 257 AARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQ- 433 A R+DLDG+ I P+TICMIGAGGFIGSHLCEKLM ET HTVLA+DVYSDKI+HLLEP Sbjct: 2 AGRVDLDGNPIKPMTICMIGAGGFIGSHLCEKLMSETPHTVLAVDVYSDKIKHLLEPTSL 61
Query: 434 PWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALPVV 613 PW+ RI+FHR+NIKND RLEGLIK++DL +NLAAICTPADYNTRPLDTIYSNF DALPVV Sbjct: 62 PWNGRIQFHRINIKNDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDALPVV 121
Query: 614 RYCSD 628 +YCS+ Sbjct: 122 KYCSE 126
>tr|B4UW57|B4UW57_ARAHY Putative dihydroflavonol reductase (Fragment) OS=Arachis hypogaea PE=2 SV=1 Length = 217
Score = 213 bits (541), Expect = 1e-53 Identities = 103/130 (79%), Positives = 114/130 (87%), Gaps = 1/130 (0%) Frame = +2
Query: 242 AMAATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLL 421 A A +AR+DLDG+ I PLTICMIGAGGFIGSHLCEKLM ET+H VLA+DVY+DKI+HLL Sbjct: 5 ASAGASARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETQHKVLALDVYNDKIKHLL 64
Query: 422 EPGQ-PWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTD 598 EP PW RI FHRLNIK+D RLEGLIK+SDL INLAAICTPADYNTRPLDTIYSNF D Sbjct: 65 EPDNLPWHGRITFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFID 124
Query: 599 ALPVVRYCSD 628 ALPVV+YCS+ Sbjct: 125 ALPVVKYCSE 134
>tr|Q6JJ41|Q6JJ41_IPOTF Putative dihydroflavonol reductase (Putative uncharacterized protein) OS=Ipomoea trifida PE=4 SV=1 Length = 407
Score = 212 bits (539), Expect = 2e-53 Identities = 99/125 (79%), Positives = 113/125 (90%), Gaps = 1/125 (0%) Frame = +2
Query: 257 AARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQ- 433 A R+DLDG+ I P+TICMIGAGGFIGSHLCEKLM ET+H VLA+DVY+DKI+HLLEP Sbjct: 2 AGRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETQHKVLAVDVYNDKIKHLLEPASL 61
Query: 434 PWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALPVV 613 PW+ RI+FHRLNIKND RLEGLIK++DL +NLAAICTPADYNTRPLDTIYSNF DALPVV Sbjct: 62 PWADRIQFHRLNIKNDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDALPVV 121
Query: 614 RYCSD 628 +YCS+ Sbjct: 122 KYCSE 126
>tr|Q2LAM6|Q2LAM6_9MAGN UDP-D-apiose/UDP-D-xylose synthase OS=Vitis pseudoreticulata PE=2 SV=1 Length = 293
Score = 211 bits (538), Expect = 2e-53 Identities = 102/127 (80%), Positives = 114/127 (89%), Gaps = 1/127 (0%) Frame = +2
Query: 251 ATAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPG 430 A+AARLDLDG+ I P+TICMIGAGGFIGSHLCEKLM ET H VLA+DV SDKI+HLLEP Sbjct: 2 ASAARLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVCSDKIKHLLEPA 61
Query: 431 -QPWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALP 607 PWS RI+FHR+NIK+D RLEGLIK++DL INLAAICTPADYNTRPLDTIYSNF DALP Sbjct: 62 THPWSDRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 121
Query: 608 VVRYCSD 628 VV+YCS+ Sbjct: 122 VVKYCSE 128
>tr|B7FI57|B7FI57_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 390
Score = 211 bits (538), Expect = 2e-53 Identities = 101/126 (80%), Positives = 113/126 (89%), Gaps = 1/126 (0%) Frame = +2
Query: 254 TAARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQ 433 ++ R+DLDG+ I PLTICMIGAGGFIGSHLCEKLM ET H VLA+DVY+DKI+HLLEP Sbjct: 5 SSTRIDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETSHKVLALDVYNDKIKHLLEPES 64
Query: 434 -PWSSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALPV 610 PW+ RI FHRLNIKND RLEGLIK++DLVINLAAICTPADYNTRPLDTIYSNF DALPV Sbjct: 65 LPWNGRIHFHRLNIKNDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDALPV 124
Query: 611 VRYCSD 628 V+YCS+ Sbjct: 125 VKYCSE 130
>tr|Q6TNI9|Q6TNI9_NICBE UDP-D-apiose/UDP-D-xylose synthase OS=Nicotiana benthamiana GN=AXS1 PE=2 SV=1 Length = 387
Score = 210 bits (535), Expect = 5e-53 Identities = 99/123 (80%), Positives = 112/123 (91%), Gaps = 1/123 (0%) Frame = +2
Query: 263 RLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQ-PW 439 R+DLDG+ I P+ ICMIGAGGFIGSHLCEKLM ET HTVLA+DVYSDKI+HLLEP PW Sbjct: 5 RVDLDGNVIKPMKICMIGAGGFIGSHLCEKLMNETPHTVLAVDVYSDKIKHLLEPADLPW 64
Query: 440 SSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALPVVRY 619 + RI+FHR+NIKND RLEGLIK++DLV+NLAAICTPADYNTRPLDTIYSNF DALPVV+Y Sbjct: 65 TGRIQFHRINIKNDSRLEGLIKMADLVVNLAAICTPADYNTRPLDTIYSNFIDALPVVKY 124
Query: 620 CSD 628 CS+ Sbjct: 125 CSE 127
>tr|Q6QP37|Q6QP37_MAIZE DTDP-glucose 4,6-dehydratase OS=Zea mays PE=2 SV=1 Length = 395
Score = 208 bits (530), Expect = 2e-52 Identities = 101/125 (80%), Positives = 111/125 (88%), Gaps = 1/125 (0%) Frame = +2
Query: 257 AARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQP 436 A RLDLDG+ IAPLTICMIGAGGFIGSHLCEKLM ET HTVLA+DVY DKI+HL++P P Sbjct: 9 ATRLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETHHTVLAVDVYCDKIRHLVDPAPP 68
Query: 437 W-SSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALPVV 613 + RI FHRLNIKND RLEGLIK++DL INLAAICTPADYNTRPLDTIYSNF DALPVV Sbjct: 69 HLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 128
Query: 614 RYCSD 628 +YCS+ Sbjct: 129 KYCSE 133
>tr|B6TQB1|B6TQB1_MAIZE Bifunctional polymyxin resistance arnA protein OS=Zea mays PE=2 SV=1 Length = 394
Score = 208 bits (530), Expect = 2e-52 Identities = 101/125 (80%), Positives = 111/125 (88%), Gaps = 1/125 (0%) Frame = +2
Query: 257 AARLDLDGSEIAPLTICMIGAGGFIGSHLCEKLMWETEHTVLAIDVYSDKIQHLLEPGQP 436 A RLDLDG+ IAPLTICMIGAGGFIGSHLCEKLM ET HTVLA+DVY DKI+HL++P P Sbjct: 9 ATRLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETHHTVLAVDVYCDKIRHLVDPAPP 68
Query: 437 W-SSRIEFHRLNIKNDPRLEGLIKLSDLVINLAAICTPADYNTRPLDTIYSNFTDALPVV 613 + RI FHRLNIKND RLEGLIK++DL INLAAICTPADYNTRPLDTIYSNF DALPVV Sbjct: 69 HLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 128
Query: 614 RYCSD 628 +YCS+ Sbjct: 129 KYCSE 133
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