BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962533|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_C03, 5'
         (630 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q685J3|MUC17_HUMAN Mucin-17 OS=Homo sapiens GN=MUC17 PE=1 SV=1      32   3.5  
sp|Q9USY1|YOW5_SCHPO UPF0724 protein C1861.05 OS=Schizosaccharom...    31   4.6  

>sp|Q685J3|MUC17_HUMAN Mucin-17 OS=Homo sapiens GN=MUC17 PE=1 SV=1
          Length = 4493

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 337  PRCKTCLRLCCKESRTSC*KGSRWQCLHCEGGNRQEGPICTQ 462
            PR  TC    C+ + + C  G  W  L C+  N   G +C +
Sbjct: 4130 PRTTTCFGDGCQNTASRCKNGGTWDGLKCQCPNLYYGELCEE 4171


>sp|Q9USY1|YOW5_SCHPO UPF0724 protein C1861.05
           OS=Schizosaccharomyces pombe GN=SPBC1861.05 PE=2 SV=1
          Length = 747

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -1

Query: 333 LPFFNMKEFEVKTFVLHTLILANGFTSTKVT-LSDARQR*SLVDAQMAIVQTRSLS 169
           +P  ++KE+  K+ + HT++  + FTS   T ++D      L  A MAI++  S S
Sbjct: 457 VPTSSIKEYLTKSSLQHTIVEKSNFTSCSYTAINDCNGNLLLAGADMAIMENLSYS 512

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962533|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_C03, 5'
         (630 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3CDT0|B3CDT0_9BACE Putative uncharacterized protein OS=Bacte...    36   2.2  
tr|A8FXC3|A8FXC3_SHESH Protein-export membrane protein SecF OS=S...    35   2.9  

>tr|B3CDT0|B3CDT0_9BACE Putative uncharacterized protein
           OS=Bacteroides intestinalis DSM 17393 GN=BACINT_02349
           PE=4 SV=1
          Length = 192

 Score = 35.8 bits (81), Expect = 2.2
 Identities = 28/102 (27%), Positives = 43/102 (42%)
 Frame = +2

Query: 158 RKSVERERVWTMAICASTKLHLCLASDKVTLVDVNPLARIRVCKTNVLTSNSFILKKGKG 337
           R+ +E ER +T A+ A  +    L +D+VT          R     V ++ +FIL  G  
Sbjct: 43  REKIEEERAYTDAVQAIKERKFVLEADRVTFK--------RGRSAFVTSNTNFILLNGDR 94

Query: 338 HAARHVYVCVARSPEQAVERDQDGSVSTVKEGTDKRGQYALN 463
            + +  +      P        DG+V  VK  TDK+G    N
Sbjct: 95  ASVQIAFNGAFAGPNGIGGVTVDGTVGEVKTTTDKKGNVTCN 136


>tr|A8FXC3|A8FXC3_SHESH Protein-export membrane protein SecF
           OS=Shewanella sediminis (strain HAW-EB3) GN=Ssed_2889
           PE=3 SV=1
          Length = 315

 Score = 35.4 bits (80), Expect = 2.9
 Identities = 24/71 (33%), Positives = 32/71 (45%)
 Frame = -1

Query: 255 STKVTLSDARQR*SLVDAQMAIVQTRSLSTDFLQRFPVLEASDDNAKKSQKYREALKFDP 76
           S+   L   R   S V+   A+VQ    S D L R PV E    + + SQ    ALKFDP
Sbjct: 57  SSPSDLEALRAELSSVETDGAVVQNFGSSRDVLVRLPVKEGVATDTQVSQVMDAALKFDP 116

Query: 75  AEQMRAFRLLG 43
               +   ++G
Sbjct: 117 QVVQKRVEVVG 127