DK962552 |
Clone id |
TST39A01NGRL0014_C22 |
Library |
TST39 |
Length |
588 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_C22. 5' end sequence. |
Accession |
DK962552 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1168Contig1 |
Sequence |
CGAGCTGCAGCGTTCTATTTCGCAATCCATGGCTGCGACAGAGATACCCAAACGGATCAA GGGCAAGGTGGCTGTGGTGACTGCCTCCACGCAGGGCATTGGCTACGCCATCGCCCGCCG GCTCGGTCTTGAAGGAGCTTCTGTCGTTATCTCCTCCCGAAAACAGAAAAATGTTGATGA GGCTGTACAATCACTGAAAGAGTTGGGTATCGATGTGTTGGGGGTTGCATGTCATGTCGG GAATGCTGATCACAGGAAGAATCTTATCAAGAGCGCTGTTGATAAATTTGGGCGATTGGA TATCTTTGTGTCAAATGCAGCAGTGAGTCCTTCAACAGATCCTATTCTCACCATGTCAGA GGGAGCATTGGACAAGTTATGGGATATCAATGTAAAGGCGGGCGTTCTTCTCATACAGGA GGCAGCTCCACACTTAGCAGAAGGCGGTTCGGTAATTCTTATCTCTTCTGTAGCTGGCTA CAATCCTCAAGGACATCTTGCAATGTATGGTGTCACAAAGACTGCCTTATTTGGTCTAAC CAAGGCGCTCGCCGCAGAGCTTGCACCCAATGTCCGAGTCAATTGTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8SPU8 |
Definition |
sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus |
Align length |
191 |
Score (bit) |
180.0 |
E-value |
4.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962552|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_C22, 5' (588 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member ... 180 4e-45 sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member ... 180 5e-45 sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member ... 179 9e-45 sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 ... 178 2e-44 sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member ... 177 5e-44 sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member ... 172 1e-42 sp|Q6PKH6|DR4L2_HUMAN Dehydrogenase/reductase SDR family member ... 171 2e-42 sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member ... 168 2e-41 sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 ... 165 2e-40 sp|Q5HLD8|Y2049_STAEQ Uncharacterized oxidoreductase SERP2049 OS... 100 9e-21 sp|Q8CN40|Y2036_STAES Uncharacterized oxidoreductase SE_2036 OS=... 100 9e-21 sp|O07575|YHDF_BACSU Uncharacterized oxidoreductase yhdF OS=Baci... 99 2e-20 sp|P0A0I0|FABG_STAAW 3-oxoacyl-[acyl-carrier-protein] reductase ... 96 1e-19 sp|Q6G9Y2|FABG_STAAS 3-oxoacyl-[acyl-carrier-protein] reductase ... 96 1e-19 sp|Q6GHK4|FABG_STAAR 3-oxoacyl-[acyl-carrier-protein] reductase ... 96 1e-19 sp|P99093|FABG_STAAN 3-oxoacyl-[acyl-carrier-protein] reductase ... 96 1e-19 sp|P0A0H9|FABG_STAAM 3-oxoacyl-[acyl-carrier-protein] reductase ... 96 1e-19 sp|Q5HGK2|FABG_STAAC 3-oxoacyl-[acyl-carrier-protein] reductase ... 96 1e-19 sp|Q9MA93|GRDH2_ARATH Glucose and ribitol dehydrogenase homolog ... 96 1e-19 sp|Q9FZ42|GRDH1_ARATH Glucose and ribitol dehydrogenase homolog ... 95 3e-19 sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium ... 94 5e-19 sp|P47227|BPHB_BURXL Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogen... 94 7e-19 sp|P47230|BPHB_RHOGO Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogen... 93 9e-19 sp|P72220|BPHB_PSEPU Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogen... 91 3e-18 sp|Q5KTS5|GRDH_DAUCA Glucose and ribitol dehydrogenase OS=Daucus... 91 6e-18 sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger G... 90 7e-18 sp|Q8CPI3|FABG_STAES 3-oxoacyl-[acyl-carrier-protein] reductase ... 90 7e-18 sp|Q5HPW0|FABG_STAEQ 3-oxoacyl-[acyl-carrier-protein] reductase ... 90 7e-18 sp|Q48436|BUDC_KLEPN Acetoin(diacetyl) reductase OS=Klebsiella p... 90 7e-18 sp|P08694|BPHB_PSEPS Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogen... 90 7e-18
>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1 Length = 260
Score = 180 bits (457), Expect = 4e-45 Identities = 100/191 (52%), Positives = 132/191 (69%), Gaps = 5/191 (2%) Frame = +2
Query: 29 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 202 MA+ + +R + KVA+VTAST GIG+AIARRL +GA VV+SSRKQ+NVD AV +LK Sbjct: 1 MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 60
Query: 203 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 382 G+ V G CHVG A+ R+ L+ +AV G +DI +SNAAVSP ++ + E DK+ Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 120
Query: 383 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAA 556 D+NVKA LL + P +A+ GGS++++SS+A Y+P L Y V+KTAL GLTK LA Sbjct: 121 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 180
Query: 557 ELA-PNVRVNC 586 ELA NVRVNC Sbjct: 181 ELAESNVRVNC 191
>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2 Length = 260
Score = 180 bits (456), Expect = 5e-45 Identities = 98/191 (51%), Positives = 134/191 (70%), Gaps = 5/191 (2%) Frame = +2
Query: 29 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 202 MA++ + +R + KVA+VTAST GIG+AIARRL +GA VV+SSRKQ+NVD+AV +L+ Sbjct: 1 MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 60
Query: 203 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 382 G+ V G CHVG A+ R+ L+ +AV G +DI VSNAAV+P I+ ++E DK Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 120
Query: 383 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAA 556 DINVKA L+ + P + + GGSV+++SS+A ++P + Y V+KTAL GLTK LA Sbjct: 121 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 180
Query: 557 ELAP-NVRVNC 586 ELAP N+RVNC Sbjct: 181 ELAPRNIRVNC 191
>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2 Length = 260
Score = 179 bits (454), Expect = 9e-45 Identities = 97/191 (50%), Positives = 134/191 (70%), Gaps = 5/191 (2%) Frame = +2
Query: 29 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 202 MA++ + +R + KVA+VTAST GIG+AIARRL +GA VV+SSRKQ+NVD+AV +L+ Sbjct: 1 MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 60
Query: 203 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 382 G+ V G CHVG A+ R+ L+ +AV G +DI VSNAAV+P ++ ++E DK Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTL 120
Query: 383 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAA 556 DINVKA L+ + P + + GGSV+++SS+A ++P + Y V+KTAL GLTK LA Sbjct: 121 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 180
Query: 557 ELAP-NVRVNC 586 ELAP N+RVNC Sbjct: 181 ELAPRNIRVNC 191
>sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1 Length = 260
Score = 178 bits (451), Expect = 2e-44 Identities = 99/191 (51%), Positives = 132/191 (69%), Gaps = 5/191 (2%) Frame = +2
Query: 29 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 202 MA+T + +R ++ KVA+VTAST GIG AIARRL +GA VV+SSRKQ+NVD V +L+ Sbjct: 1 MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 60
Query: 203 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 382 G+ V G CHVG A+ R+ L+ AV+ G +DI VSNAAV+P I+ +E DK+ Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120
Query: 383 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAA 556 +NVKA VL+ + P + + GGSV+++SSV Y+P +L Y V+KTAL GLTK LA Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180
Query: 557 ELAP-NVRVNC 586 ELAP N+RVNC Sbjct: 181 ELAPRNIRVNC 191
>sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1 Length = 260
Score = 177 bits (448), Expect = 5e-44 Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 5/191 (2%) Frame = +2
Query: 29 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 202 MA++ + +R + KVA+VTAST GIG AIARRL +GA VVISSRKQ+NVD AV +L+ Sbjct: 1 MASSGVTRRDPLANKVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQA 60
Query: 203 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 382 G+ V G CHVG A+ R+ L+ +A++ G +DI VSNAAV+P ++ ++E DK+ Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKIL 120
Query: 383 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAA 556 DINVKA L+ + P + + GGSV++++S+A +NP L Y V+KTAL GLTK LA Sbjct: 121 DINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLAL 180
Query: 557 EL-APNVRVNC 586 EL A N+RVNC Sbjct: 181 ELAAQNIRVNC 191
>sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1 Length = 260
Score = 172 bits (435), Expect = 1e-42 Identities = 95/191 (49%), Positives = 132/191 (69%), Gaps = 5/191 (2%) Frame = +2
Query: 29 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 202 MA++ + +R + KVA+VTAST GIG+AIARRL +GA VV+SSRKQ+NVD AV +L+ Sbjct: 1 MASSGLTRRNPLSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQG 60
Query: 203 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 382 G+ V G+ CHVG A+ R+ LI +A+ + +DI VSNAAV+P ++ ++E DK+ Sbjct: 61 EGLSVTGIVCHVGKAEDREKLITTALKRHRGIDILVSNAAVNPFFGNLMDVTEEVWDKVL 120
Query: 383 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAA 556 INV A ++I+ P + + GGSV+++ SVAG+ L Y V+KTAL GLTK AA Sbjct: 121 SINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAA 180
Query: 557 ELAP-NVRVNC 586 ELAP N+RVNC Sbjct: 181 ELAPKNIRVNC 191
>sp|Q6PKH6|DR4L2_HUMAN Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1 Length = 230
Score = 171 bits (434), Expect = 2e-42 Identities = 94/194 (48%), Positives = 131/194 (67%), Gaps = 5/194 (2%) Frame = +2
Query: 20 SQSMAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQS 193 S +A++ + +R + KVA+VTAST GIG+AIARRL + A VV+SSRKQ+NVD+AV + Sbjct: 14 SVRLASSRMTRRDPLTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVAT 73
Query: 194 LKELGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALD 373 L+ G+ V G CHVG A+ R+ L+ AV G +DI VSNAAV+P ++ ++E D Sbjct: 74 LQGEGLSVTGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWD 133
Query: 374 KLWDINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKA 547 K DINVKA L+ + P + + GGSV+++SS+A ++P + Y V+KTAL GL Sbjct: 134 KTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNT 193
Query: 548 LAAELAP-NVRVNC 586 LA ELAP N+RVNC Sbjct: 194 LAIELAPRNIRVNC 207
>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3 Length = 258
Score = 168 bits (425), Expect = 2e-41 Identities = 92/190 (48%), Positives = 128/190 (67%), Gaps = 4/190 (2%) Frame = +2
Query: 29 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 202 M++T I ++ + +VAVVT ST GIG+AIARRL +GA VVISSRKQ+NVD A+ L+ Sbjct: 1 MSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQG 60
Query: 203 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 382 G+ V G+ CHVG A+ R+ L+ A++ G +D V +A V+P L SE DK+ Sbjct: 61 EGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKIL 120
Query: 383 DINVKAGVLLIQEAAPHLA-EGGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAAE 559 +NVK+ LL+ + P++ G+VIL+SS+A YNP L +Y V+KTAL GLT+ LA E Sbjct: 121 SVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALE 180
Query: 560 LAP-NVRVNC 586 LAP ++RVNC Sbjct: 181 LAPKDIRVNC 190
>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=1 Length = 260
Score = 165 bits (417), Expect = 2e-40 Identities = 93/180 (51%), Positives = 123/180 (68%), Gaps = 3/180 (1%) Frame = +2
Query: 56 IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKELGIDVLGVACH 235 + KVA+VTAST GIG AIARRL +GA VVISSRKQ+NVD AV +L+ G+ V GV CH Sbjct: 12 LANKVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCH 71
Query: 236 VGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLWDINVKAGVLLI 415 VG A+ R+ L+ A+ +DI VSNAAV+P ++ ++E +K+ INV A ++I Sbjct: 72 VGKAEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMI 131
Query: 416 QEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAAELAP-NVRVNC 586 + P + + GGSV+++SSVAG+ L Y V+KTAL GLTK AAELAP N+RVNC Sbjct: 132 KAVVPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNC 191
>sp|Q5HLD8|Y2049_STAEQ Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1 Length = 230
Score = 99.8 bits (247), Expect = 9e-21 Identities = 59/173 (34%), Positives = 103/173 (59%), Gaps = 2/173 (1%) Frame = +2
Query: 53 RIKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKELGIDVLGVAC 232 ++K KVAVVT ++ GIG AIA++L +GAS+V+ R ++ ++E Q +L V+ Sbjct: 3 KVKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQ---QLNTPAKVVSA 59
Query: 233 HVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLWDINVKAGVLL 412 V + +++K+ +D FG +DI V++A S S+ I + D + D+N+K + + Sbjct: 60 DVTVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSS-KITDYNVEQWDTMIDVNIKGTLHV 118
Query: 413 IQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKALAAELA 565 +Q P+L + G +I ++SV+G+ P A+YG TK A+ +T++L ELA Sbjct: 119 LQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEKELA 171
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R0Z8 |
Definition |
tr|A7R0Z8|A7R0Z8_VITVI Chromosome undetermined scaffold_332, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
182 |
Score (bit) |
257.0 |
E-value |
3.0e-67 |
Report |
|