NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962582
Clone id TST39A01NGRL0014_E04
Library
Length 648
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_E04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TTCCTTTCCAAGCTTGTAATCTTGCCCGTTAAAAATAAGCTCTCCCTGTTGATGGTGGCT
GTTGGGCAATTTCTTGTTATGAATGAGAGCTCTGCACCCTGCTTTTTTGGCCTGCTCTGC
TTCTTCACATTGTGAGCGCTTTGCTTGCAGCGTACACGAAGGCTACCTGCTGGTGGGTAG
CCAGGGTTCGGCGCAGATCAGCATCATCGACAACTCGTCAACCAGCAGAACTGCACACGT
GGGAAAATTGCTTTCTTGTCGACAACAAAGGCCTCTGCTTCACAATGTCTCCTGTCCCTT
GGGCTCTTCGAATTTGAATCTCAACAGGCAGGTCATATCCATTCTCTGAGCTACCCAAGC
TTGTCGTAGACATCCCACGAAATCTCCCGTTGAATTCCACTGTAGCAGCAAAGAACCTCT
CTATATCTTTCTCCTGTTGAAAATCATGGAAAACCTGAAGCTCACCCGCATTCCGCCTGG
CCTTAGGCTTTTCCCGACAATTCAAAGTACAGAGTCCCGAGCTCAAATATACAGAGCCTC
TGTTTTACTCCTGACGTTCGTTGCATATGCCCTTCTACATGCATCCAGAAAACCCCCCAG
TGTCGCCAAAAATGTCCTTGCCTCCAGCGATTCGTTGCATTCATCACT
■■Homology search results ■■ -
sp_hit_id P57057
Definition sp|P57057|GLPT_HUMAN Glycerol-3-phosphate transporter OS=Homo sapiens
Align length 53
Score (bit) 43.9
E-value 0.0007
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962582|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_E04, 5'
         (648 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P57057|GLPT_HUMAN Glycerol-3-phosphate transporter OS=Homo sa...    44   7e-04
sp|Q7SY29|SPX2_DANRE Sugar phosphate exchanger 2 OS=Danio rerio ...    40   0.008
sp|Q5M7K3|SPX2_XENTR Sugar phosphate exchanger 2 OS=Xenopus trop...    37   0.068
sp|Q8AVC3|SPX2_XENLA Sugar phosphate exchanger 2 OS=Xenopus laev...    37   0.068
sp|Q8TED4|SPX2_HUMAN Sugar phosphate exchanger 2 OS=Homo sapiens...    37   0.068
sp|Q9WU81|SPX2_MOUSE Sugar phosphate exchanger 2 OS=Mus musculus...    37   0.089
sp|Q58CV5|SPX2_BOVIN Sugar phosphate exchanger 2 OS=Bos taurus G...    37   0.12 
sp|Q5F3N0|SPX3_CHICK Sugar phosphate exchanger 3 OS=Gallus gallu...    34   0.75 
sp|Q17QZ3|SPX3_BOVIN Sugar phosphate exchanger 3 OS=Bos taurus G...    31   4.9  
sp|P61746|GPDA_RHOPA Glycerol-3-phosphate dehydrogenase [NAD(P)+...    31   4.9  
sp|Q3TIT8|SPX3_MOUSE Sugar phosphate exchanger 3 OS=Mus musculus...    31   6.4  

>sp|P57057|GLPT_HUMAN Glycerol-3-phosphate transporter OS=Homo
           sapiens GN=SLC37A1 PE=2 SV=1
          Length = 533

 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 23/53 (43%), Positives = 31/53 (58%)
 Frame = +2

Query: 461 LTRIPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVL 619
           + R+P G+R   +     SR Q YRA + +LTF+ YA  H SRKP S+ K  L
Sbjct: 1   MARLPAGIRFIISF----SRDQWYRAFIFILTFLLYASFHLSRKPISIVKGEL 49


>sp|Q7SY29|SPX2_DANRE Sugar phosphate exchanger 2 OS=Danio rerio
           GN=slc37a2 PE=2 SV=1
          Length = 494

 Score = 40.4 bits (93), Expect = 0.008
 Identities = 22/50 (44%), Positives = 29/50 (58%)
 Frame = +2

Query: 470 IPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVL 619
           + PG++L  +     SR   YR S+L LTFV Y   H SRKP S+ K+ L
Sbjct: 4   LAPGIKLITSF----SRDSWYRFSILFLTFVFYTSYHLSRKPISIVKSQL 49


>sp|Q5M7K3|SPX2_XENTR Sugar phosphate exchanger 2 OS=Xenopus
           tropicalis GN=slc37a2 PE=2 SV=1
          Length = 499

 Score = 37.4 bits (85), Expect = 0.068
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +2

Query: 470 IPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVL 619
           + P +RL  ++    SR   YR  ++++TF+ Y   H SRKP S+ K  L
Sbjct: 5   LAPAIRLMQSV----SRDSCYRGFIIVMTFLFYTCYHMSRKPISIVKGQL 50


>sp|Q8AVC3|SPX2_XENLA Sugar phosphate exchanger 2 OS=Xenopus laevis
           GN=slc37a2 PE=2 SV=1
          Length = 499

 Score = 37.4 bits (85), Expect = 0.068
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +2

Query: 470 IPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVL 619
           + P +RL  ++    SR   YR  ++++TF+ Y   H SRKP S+ K  L
Sbjct: 5   LAPAIRLMQSV----SRDSCYRGFIIVMTFLFYTCYHLSRKPISIVKGQL 50


>sp|Q8TED4|SPX2_HUMAN Sugar phosphate exchanger 2 OS=Homo sapiens
           GN=SLC37A2 PE=2 SV=2
          Length = 501

 Score = 37.4 bits (85), Expect = 0.068
 Identities = 21/50 (42%), Positives = 28/50 (56%)
 Frame = +2

Query: 470 IPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVL 619
           + PG+  F       SR   +R  +LLLTF+ YA  H SRKP S+ K+ L
Sbjct: 5   LAPGVWFFRAF----SRDSWFRGLILLLTFLIYACYHMSRKPISIVKSRL 50


>sp|Q9WU81|SPX2_MOUSE Sugar phosphate exchanger 2 OS=Mus musculus
           GN=Slc37a2 PE=2 SV=1
          Length = 501

 Score = 37.0 bits (84), Expect = 0.089
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +2

Query: 515 SRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVL 619
           SR   +R  +LLLTF+ YA  H SRKP S+ K+ L
Sbjct: 16  SRDSWFRGFILLLTFLIYACYHMSRKPISIVKSRL 50


>sp|Q58CV5|SPX2_BOVIN Sugar phosphate exchanger 2 OS=Bos taurus
           GN=SLC37A2 PE=2 SV=1
          Length = 491

 Score = 36.6 bits (83), Expect = 0.12
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +2

Query: 530 YRASVLLLTFVAYALLHASRKPPSVAKNVL 619
           YRA +LL+TF+ Y   H SRKP SV K+ L
Sbjct: 11  YRAFILLITFLIYTCYHMSRKPISVVKSRL 40


>sp|Q5F3N0|SPX3_CHICK Sugar phosphate exchanger 3 OS=Gallus gallus
           GN=SLC37A3 PE=2 SV=1
          Length = 501

 Score = 33.9 bits (76), Expect = 0.75
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = +2

Query: 470 IPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLAS 625
           +P   R  P+ +   S    +   V LLTF +Y+LLHASRK  S  K  ++S
Sbjct: 3   VPGSSRRQPSNRGLVSHCTHHHIVVFLLTFFSYSLLHASRKTFSNVKVSISS 54


>sp|Q17QZ3|SPX3_BOVIN Sugar phosphate exchanger 3 OS=Bos taurus
           GN=SLC37A3 PE=2 SV=1
          Length = 495

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +2

Query: 515 SRAQIYRASVLLLTFVAYALLHASRKPPSVAK 610
           SR   +   V LLTF +Y+LLHASRK  S  K
Sbjct: 14  SRFSHHHMVVFLLTFFSYSLLHASRKTFSNVK 45


>sp|P61746|GPDA_RHOPA Glycerol-3-phosphate dehydrogenase [NAD(P)+]
           OS=Rhodopseudomonas palustris GN=gpsA PE=3 SV=1
          Length = 329

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +2

Query: 464 TRIPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYAL 574
           +R  PG+RL P+IQ T   A+  RA  LLL   A  L
Sbjct: 49  SRFLPGVRLEPSIQVTRDLAEAARADALLLVVPAQVL 85
tr_hit_id A7QS24
Definition tr|A7QS24|A7QS24_VITVI Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Vitis vinifera
Align length 51
Score (bit) 61.6
E-value 4.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962582|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_E04, 5'
         (648 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QS24|A7QS24_VITVI Chromosome undetermined scaffold_155, who...    62   4e-08
tr|A5BGY4|A5BGY4_VITVI Putative uncharacterized protein OS=Vitis...    59   3e-07
tr|A9U271|A9U271_PHYPA Predicted protein (Fragment) OS=Physcomit...    57   1e-06
tr|A7R8P4|A7R8P4_VITVI Chromosome undetermined scaffold_2813, wh...    55   4e-06
tr|A9RN59|A9RN59_PHYPA Predicted protein OS=Physcomitrella paten...    54   6e-06
tr|Q9SL56|Q9SL56_ARATH Putative membrane transporter OS=Arabidop...    52   2e-05
tr|Q6NKT8|Q6NKT8_ARATH At2g13100 OS=Arabidopsis thaliana PE=2 SV=1     52   2e-05
tr|Q6ID34|Q6ID34_ARATH At2g13100 OS=Arabidopsis thaliana PE=2 SV=1     52   2e-05
tr|Q6H8H1|Q6H8H1_ORYSJ Os02g0652800 protein OS=Oryza sativa subs...    52   4e-05
tr|Q949F1|Q949F1_ORYSA Putative glycerol 3-phosphate permease OS...    51   5e-05
tr|B8AG25|B8AG25_ORYSI Putative uncharacterized protein OS=Oryza...    51   5e-05
tr|A4SBA2|A4SBA2_OSTLU MFS family transporter: glycerol-3-phosph...    51   5e-05
tr|Q2A9H2|Q2A9H2_BRAOL Transporter, putative OS=Brassica olerace...    51   7e-05
tr|O23596|O23596_ARATH Glycerol-3-phosphate permease like protei...    50   1e-04
tr|A2YRD3|A2YRD3_ORYSI Putative uncharacterized protein OS=Oryza...    50   1e-04
tr|Q2A996|Q2A996_BRAOL Transporter, putative OS=Brassica olerace...    50   2e-04
tr|B4FA98|B4FA98_MAIZE Putative uncharacterized protein OS=Zea m...    50   2e-04
tr|Q6ZD99|Q6ZD99_ORYSJ Putative Glycerol-3-phosphate transporter...    49   3e-04
tr|Q0J7X7|Q0J7X7_ORYSJ Os08g0156600 protein OS=Oryza sativa subs...    49   3e-04
tr|A3BPS6|A3BPS6_ORYSJ Putative uncharacterized protein OS=Oryza...    49   3e-04
tr|Q00VU3|Q00VU3_OSTTA Permease of the major facilitator superfa...    49   3e-04
tr|Q7ZTQ0|Q7ZTQ0_XENLA Slc37a1-prov protein OS=Xenopus laevis GN...    47   0.001
tr|Q6NTN2|Q6NTN2_XENLA MGC83169 protein OS=Xenopus laevis GN=MGC...    46   0.002
tr|A8IJH7|A8IJH7_CHLRE Glycerol-3-phosphate permease-like protei...    45   0.003
tr|A3A9P5|A3A9P5_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.005
tr|Q9C5L3|Q9C5L3_ARATH Putative uncharacterized protein At3g4742...    43   0.014
tr|Q9STY1|Q9STY1_ARATH Putative uncharacterized protein T21L8.17...    43   0.019
tr|B4KPN5|B4KPN5_DROMO GI20365 OS=Drosophila mojavensis GN=GI203...    43   0.019
tr|B6SRZ4|B6SRZ4_MAIZE Glycerol 3-phosphate permease OS=Zea mays...    42   0.024
tr|B3MBW3|B3MBW3_DROAN GF12808 OS=Drosophila ananassae GN=GF1280...    42   0.024

>tr|A7QS24|A7QS24_VITVI Chromosome undetermined scaffold_155, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00005645001 PE=4 SV=1
          Length = 490

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +2

Query: 470 IPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLA 622
           + PGL LFPT++        +R S LL+TFVAYA  HASRKPPS+ K+VL+
Sbjct: 8   LAPGLNLFPTLKPPHKTLTFHRISALLITFVAYASFHASRKPPSIVKSVLS 58


>tr|A5BGY4|A5BGY4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_043651 PE=4 SV=1
          Length = 488

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = +2

Query: 470 IPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLA 622
           + PGL LFPT++        +R S LL+TF+AYA  HASR PPS+ K+VL+
Sbjct: 8   LAPGLNLFPTLKPPHKTLTFHRISALLITFIAYASFHASRXPPSIVKSVLS 58


>tr|A9U271|A9U271_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_2560 PE=4 SV=1
          Length = 525

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = +2

Query: 473 PPGLRLFPTIQS-TESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLASSDSLHSS 646
           PPG+ L   ++  T+     YRASVL++TF+AYA+ H SRKPPS+ K+VL    S+ S+
Sbjct: 4   PPGIALIKKLRGGTDFSYSSYRASVLIITFIAYAMFHMSRKPPSIVKSVLDPEGSVISA 62


>tr|A7R8P4|A7R8P4_VITVI Chromosome undetermined scaffold_2813, whole
           genome shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00012030001 PE=4 SV=1
          Length = 63

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +2

Query: 473 PPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVL 619
           PPG+ L  +I+  E R   YR  VLL+TF+AYA  HASRKP S+ K+V+
Sbjct: 12  PPGILLIKSIRGKEWRQGTYRYVVLLITFIAYACYHASRKPSSIVKSVM 60


>tr|A9RN59|A9RN59_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_55740 PE=4 SV=1
          Length = 511

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = +2

Query: 467 RIPPGLRLFPTIQSTESRAQI-YRASVLLLTFVAYALLHASRKPPSVAKNVLASSDSLHS 643
           R PPG+ L   ++     +   Y+A VLL+TF+AYAL HASRKPPS+ K+VL    S+ S
Sbjct: 9   RPPPGIALLRKLKGGRDFSYTTYQAIVLLVTFIAYALFHASRKPPSIVKSVLDPEGSVIS 68

Query: 644 S 646
           +
Sbjct: 69  T 69


>tr|Q9SL56|Q9SL56_ARATH Putative membrane transporter OS=Arabidopsis
           thaliana GN=At2g13100 PE=2 SV=1
          Length = 476

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = +2

Query: 458 KLTRIPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLASSDSL 637
           ++  + P   LFP + +       ++  VL++TF AYA  HASRKPPS+ K+VL    SL
Sbjct: 4   RIVGLAPAFSLFPNLNTPHKTFTFHQILVLIITFTAYASFHASRKPPSIVKSVL-GPPSL 62

Query: 638 HSS 646
           +SS
Sbjct: 63  NSS 65


>tr|Q6NKT8|Q6NKT8_ARATH At2g13100 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 307

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = +2

Query: 458 KLTRIPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLASSDSL 637
           ++  + P   LFP + +       ++  VL++TF AYA  HASRKPPS+ K+VL    SL
Sbjct: 4   RIVGLAPAFSLFPNLNTPHKTFTFHQILVLIITFTAYASFHASRKPPSIVKSVL-GPPSL 62

Query: 638 HSS 646
           +SS
Sbjct: 63  NSS 65


>tr|Q6ID34|Q6ID34_ARATH At2g13100 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 329

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = +2

Query: 458 KLTRIPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLASSDSL 637
           ++  + P   LFP + +       ++  VL++TF AYA  HASRKPPS+ K+VL    SL
Sbjct: 4   RIVGLAPAFSLFPNLNTPHKTFTFHQILVLIITFTAYASFHASRKPPSIVKSVL-GPPSL 62

Query: 638 HSS 646
           +SS
Sbjct: 63  NSS 65


>tr|Q6H8H1|Q6H8H1_ORYSJ Os02g0652800 protein OS=Oryza sativa subsp.
           japonica GN=P0491E01.22 PE=2 SV=1
          Length = 494

 Score = 51.6 bits (122), Expect = 4e-05
 Identities = 28/57 (49%), Positives = 33/57 (57%)
 Frame = +2

Query: 458 KLTRIPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLASS 628
           +  R PPGL   P I         +R  VL LTFVAYAL HASRKPPS+ K  L+ +
Sbjct: 10  RANRAPPGLCALPAISYNS-----HRGLVLGLTFVAYALYHASRKPPSIVKRALSEA 61


>tr|Q949F1|Q949F1_ORYSA Putative glycerol 3-phosphate permease
           OS=Oryza sativa GN=W265ERIPDK PE=4 SV=1
          Length = 525

 Score = 51.2 bits (121), Expect = 5e-05
 Identities = 28/54 (51%), Positives = 32/54 (59%)
 Frame = +2

Query: 467 RIPPGLRLFPTIQSTESRAQIYRASVLLLTFVAYALLHASRKPPSVAKNVLASS 628
           R PPGL   P I         +R  VL LTFVAYAL HASRKPPS+ K  L+ +
Sbjct: 13  RAPPGLCALPAISYNS-----HRGLVLGLTFVAYALYHASRKPPSIVKRALSEA 61