DK962593
Clone id TST39A01NGRL0014_E15
Library
Length 223
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_E15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
ATTGTTCAGCTCAAAGTATCTATGTAAATTAGGTATCAGGTGAGTCAGTGAGGATTTGTG
TAATTTTGTCCAACCCTCCCTCTTTCTTTCACTTCTTTTCCATTGGCTATGTATCTCCAC
AACAGCATCCCCTTTCTGACTGTGATGGACTTTTTTATGAAGGCTTGAAAGCTATATAGC
GTGGGTTATTTTTGATAGTAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P50365
Definition sp|P50365|NU5M_ALLMA NADH-ubiquinone oxidoreductase chain 5 OS=Allomyces macrogynus
Align length 28
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962593|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_E15, 5'
(199 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P50365|NU5M_ALLMA NADH-ubiquinone oxidoreductase chain 5 OS=A... 30 3.8

>sp|P50365|NU5M_ALLMA NADH-ubiquinone oxidoreductase chain 5
OS=Allomyces macrogynus GN=ND5 PE=3 SV=1
Length = 641

Score = 30.0 bits (66), Expect = 3.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3

Query: 45 SVRICVILSNPPSFFHFFSIGYVSPQQH 128
S+ +CV++S+ S H +SIGY+ H
Sbjct: 84 SITMCVVVSSISSLVHLYSIGYMQGDPH 111


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962593|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_E15, 5'
(199 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******