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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962606
Clone id TST39A01NGRL0014_F04
Library
Length 597
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_F04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATCGAAGAGCACGCACTGTGAGATCTCGCTTTCGAGCGGAGTTCGTCGTCCTGCGACATG
GCTGCCCTCGCTGCCGCGTCCGTCTCCAACGCTGCTGCTCTGGGCAACAGCCTTGCCACC
AAGAATGCTCTTCGCGAGAAGGTCCCTGTGGTGCAGGCCAGAGTCAGCATGAATTCTGAG
TACTGGTATGGGCCCGATCGCCCCAAATACCTTGGCCCCTTCTCTGACCGGACCCCTTCC
TACCTCAAGGGCGAGTTCCCTGGCGATTACGGCTGGGACACCGCTGGCCTATCTGCAGAC
CCTGAGGCATTTGCTAAGAACAGGGCCTTGGAGGTTATTCACAGCCGATGGGCCATGCTT
GGAGCTTTGGGATGCATCTGCCCAGAGGTTGCACAGAAGTATCTGAATGTGTCCTTCACG
GAGGCAGTCTGGTTCAAGGCTGGAGCACAGATTTTCTCGCAGGGTGGGTTGGACTACCTC
GGCTGCCCCTACCTTGTTCATGCACAGAGCATTCTCGCCATTTGGGCATGCCAAGTGGTG
TTGATGGGAGCTGCATAGGGCTACCGCATCGATGGTTTATCATGAGTTGGTGAGGGT
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 162
Score (bit) 240.0
E-value 5.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962606|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_F04, 5'
         (597 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...   240   5e-63
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...   235   1e-61
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   228   2e-59
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   226   9e-59
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   225   1e-58
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   224   3e-58
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   224   3e-58
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   223   8e-58
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   222   1e-57
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   222   1e-57
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   222   1e-57
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   221   3e-57
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   220   4e-57
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   220   4e-57
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   220   5e-57
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   220   5e-57
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   219   8e-57
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   219   8e-57
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   219   8e-57
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   219   8e-57
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   219   8e-57
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   218   1e-56
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   218   1e-56
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   218   1e-56
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   218   1e-56
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   218   1e-56
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   218   2e-56
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   218   2e-56
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   218   2e-56
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   218   2e-56

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
           chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
          Length = 265

 Score =  240 bits (612), Expect = 5e-63
 Identities = 119/162 (73%), Positives = 133/162 (82%), Gaps = 2/162 (1%)
 Frame = +1

Query: 118 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGL 291
           TKNA  LR+ V +  AR +M+++ WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGL
Sbjct: 23  TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 292 SADPEAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGL 471
           SADPEAFAKNRALEVIH RWAMLGALGCI PEV +K++ V F E VWFKAG+QIFS GGL
Sbjct: 83  SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 472 DYLGCPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
           DYLG P LVHAQSILA+   QVVLMG   G+RI+GL  VGEG
Sbjct: 143 DYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEG 184



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 256 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 372
           +PG   +D  GL+ DP  FA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
           III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
          Length = 268

 Score =  235 bits (600), Expect = 1e-61
 Identities = 111/156 (71%), Positives = 127/156 (81%)
 Frame = +1

Query: 130 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADPEA 309
           LR+       R++M ++ WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGLSADPEA
Sbjct: 32  LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 310 FAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLGCP 489
           FA+NRALEVIH RWAMLGALGC+ PEV QK++ V F E VWFKAG+QIFS+GGLDYLG P
Sbjct: 92  FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151

Query: 490 YLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            LVHAQSILA+   QV+LMG   G+RI+GL  VGEG
Sbjct: 152 NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEG 187


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  228 bits (580), Expect = 2e-59
 Identities = 117/166 (70%), Positives = 126/166 (75%), Gaps = 7/166 (4%)
 Frame = +1

Query: 121 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWD 279
           +N L  KV     RVSM           WYGPDRPKYLGPFS++TPSYL GEFPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 280 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFS 459
           TAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+  K   V F EAVWFKAG+QIF 
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GVKFGEAVWFKAGSQIFQ 138

Query: 460 QGGLDYLGCPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
           +GGLDYLG P LVHAQSILAIWACQVVLMGA  GYR+ G   +GEG
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGG-GPLGEG 183


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  226 bits (575), Expect = 9e-59
 Identities = 113/166 (68%), Positives = 127/166 (76%), Gaps = 7/166 (4%)
 Frame = +1

Query: 121 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWD 279
           +N L +KV   QAR++M           WYGPDRPKYLGPFS+ TPSYL GEFPGDYGWD
Sbjct: 22  QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 280 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFS 459
           TA +SADPE FAKNR LEVIH RWAMLGALGC+ PE+  K   + F EAVWFKAGAQIFS
Sbjct: 82  TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 460 QGGLDYLGCPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
           +GGLDY G P L+HAQSILAIWACQVVLMG   GYR+ G + +GEG
Sbjct: 141 EGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGT-LGEG 185


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  225 bits (574), Expect = 1e-58
 Identities = 109/144 (75%), Positives = 118/144 (81%)
 Frame = +1

Query: 166 SMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHS 345
           S  +  WYGPDRPKYLGPFSD+ PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH 
Sbjct: 43  SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 346 RWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLGCPYLVHAQSILAIW 525
           RWAMLGALGC+ PE+  K   V F EAVWFKAG+QIFS+GGLDYLG P L+HAQSILAIW
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161

Query: 526 ACQVVLMGAA*GYRIDGLS*VGEG 597
           ACQVVLMG   GYR+ G   +GEG
Sbjct: 162 ACQVVLMGFVEGYRVGG-GPLGEG 184



 Score = 30.4 bits (67), Expect = 7.1
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 256 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 372
           +PG   +D  GL+ DP+AFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  224 bits (571), Expect = 3e-58
 Identities = 109/138 (78%), Positives = 117/138 (84%)
 Frame = +1

Query: 184 WYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 363
           WYGPDRPKYLGPFS++TPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 364 ALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLGCPYLVHAQSILAIWACQVVL 543
           ALGC+ PE+  K   V F EAVWFKAGAQIFS+GGLDYLG P LVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 544 MGAA*GYRIDGLS*VGEG 597
           MG   GYR+ G   +GEG
Sbjct: 166 MGFVEGYRVGG-GPLGEG 182


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  224 bits (571), Expect = 3e-58
 Identities = 109/138 (78%), Positives = 117/138 (84%)
 Frame = +1

Query: 184 WYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 363
           WYGPDRPKYLGPFS++TPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 364 ALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLGCPYLVHAQSILAIWACQVVL 543
           ALGC+ PE+  K   V F EAVWFKAGAQIFS+GGLDYLG P LVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 544 MGAA*GYRIDGLS*VGEG 597
           MG   GYR+ G   +GEG
Sbjct: 166 MGFVEGYRVGG-GPLGEG 182


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  223 bits (567), Expect = 8e-58
 Identities = 116/166 (69%), Positives = 125/166 (75%), Gaps = 7/166 (4%)
 Frame = +1

Query: 121 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWD 279
           ++ L  KV V   R SM           WYG DRPK+LGPFS++TPSYL GEFPGDYGWD
Sbjct: 20  RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 280 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFS 459
           TAGLSADPE FAKNR LEVIHSRWAMLGALGCI PE+  K   V F EAVWFKAGAQIFS
Sbjct: 80  TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 460 QGGLDYLGCPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
           +GGLDYLG P LVHAQSILAIWA QVVLMG   GYR+ G   +GEG
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GPLGEG 183



 Score = 31.6 bits (70), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 256 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 372
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 188 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  222 bits (566), Expect = 1e-57
 Identities = 111/159 (69%), Positives = 120/159 (75%), Gaps = 8/159 (5%)
 Frame = +1

Query: 124 NALREKVPVVQARVSM--------NSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWD 279
           N L  KV   +ARV M        +   WYG DRP YLGPFS   PSYL GEFPGDYGWD
Sbjct: 21  NELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWD 80

Query: 280 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFS 459
           TAGLSADPE FAKNR LEVIHSRWAMLGALGC+ PE+  K   V F EAVWFKAG+QIF+
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN-GVKFGEAVWFKAGSQIFA 139

Query: 460 QGGLDYLGCPYLVHAQSILAIWACQVVLMGAA*GYRIDG 576
           +GGLDYLG P LVHAQSILAIWACQV+LMGA  GYR+ G
Sbjct: 140 EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 256 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 372
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 226


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  222 bits (565), Expect = 1e-57
 Identities = 107/138 (77%), Positives = 116/138 (84%)
 Frame = +1

Query: 184 WYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 363
           WYG DRPKYLGPFS++TPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49  WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 364 ALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLGCPYLVHAQSILAIWACQVVL 543
           ALGC+ PE+  K   V F EAVWFKAG+QIFS+GGLDYLG P LVHAQSILAIWACQVVL
Sbjct: 109 ALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 167

Query: 544 MGAA*GYRIDGLS*VGEG 597
           MG   GYR+ G   +GEG
Sbjct: 168 MGFVEGYRVGG-GPLGEG 184



 Score = 31.6 bits (70), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 256 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 372
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 158
Score (bit) 244.0
E-value 2.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962606|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_F04, 5'
         (597 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr...   244   2e-63
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who...   242   1e-62
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis...   242   1e-62
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote...   241   2e-62
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b...   241   2e-62
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome...   240   4e-62
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote...   239   9e-62
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ...   238   2e-61
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza...   238   2e-61
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas...   238   3e-61
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs...   237   4e-61
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr...   237   4e-61
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten...   237   4e-61
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ...   236   1e-60
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote...   236   1e-60
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   234   3e-60
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ...   234   4e-60
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus...   233   8e-60
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul...   233   8e-60
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   232   1e-59
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   231   2e-59
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   231   3e-59
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   231   3e-59
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   230   5e-59
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   229   1e-58
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   228   2e-58
tr|B6SZT9|B6SZT9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   228   2e-58
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   228   2e-58
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   228   2e-58
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   227   3e-58

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
           protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
          Length = 269

 Score =  244 bits (624), Expect = 2e-63
 Identities = 119/158 (75%), Positives = 131/158 (82%)
 Frame = +1

Query: 124 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADP 303
           N LR+ V +   + SM++E WYGPDR KYLGPFS +TPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 304 EAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLG 483
           EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V F E VWFKAGAQIFS+GGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 484 CPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            P LVHAQSILA+   QVVLMG   G+RI+GL  VGEG
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEG 188


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009737001 PE=4 SV=1
          Length = 264

 Score =  242 bits (617), Expect = 1e-62
 Identities = 117/158 (74%), Positives = 129/158 (81%)
 Frame = +1

Query: 124 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADP 303
           N LRE VP+   + +M +E WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 304 EAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLG 483
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V F E VWFKAGAQIFS+GGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 484 CPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            P LVHAQSILA+   QVVLMG   GYRI+GL  VGEG
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEG 183


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001096 PE=4 SV=1
          Length = 269

 Score =  242 bits (617), Expect = 1e-62
 Identities = 117/158 (74%), Positives = 129/158 (81%)
 Frame = +1

Query: 124 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADP 303
           N LRE VP+   + +M +E WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGLSADP
Sbjct: 31  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 304 EAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLG 483
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V F E VWFKAGAQIFS+GGLDYLG
Sbjct: 91  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 484 CPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            P LVHAQSILA+   QVVLMG   GYRI+GL  VGEG
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEG 188


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
           cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
          Length = 267

 Score =  241 bits (615), Expect = 2e-62
 Identities = 118/162 (72%), Positives = 131/162 (80%), Gaps = 2/162 (1%)
 Frame = +1

Query: 118 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGL 291
           T NA  LR+       R++M+++ WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGL
Sbjct: 25  TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 292 SADPEAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGL 471
           SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V F E VWFKAGAQIFS+GGL
Sbjct: 85  SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 472 DYLGCPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
           DYLG P LVHAQSILA+   QV+LMG   GYRI+GL  VGEG
Sbjct: 145 DYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLPGVGEG 186


>tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b
           binding protein (Fragment) OS=Vigna unguiculata
           GN=CipLhcb3 PE=2 SV=1
          Length = 211

 Score =  241 bits (615), Expect = 2e-62
 Identities = 117/158 (74%), Positives = 131/158 (82%)
 Frame = +1

Query: 124 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADP 303
           N LR+ V +   + +M+++ WYGPDR KYLGPFS +TPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDAVSMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 304 EAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLG 483
           EAFAKNRALEVIH RWA+LGALGCI PEV  K+L V F E VWFKAGAQIFS+GGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWALLGALGCITPEVLGKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 484 CPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            P LVHAQSILA+   QVVLMG A G+RI+GL  VGEG
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLAEGFRINGLDGVGEG 188


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
           PE=4 SV=1
          Length = 264

 Score =  240 bits (613), Expect = 4e-62
 Identities = 115/158 (72%), Positives = 130/158 (82%)
 Frame = +1

Query: 124 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADP 303
           N LR+ VP+   + +M +E WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 304 EAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLG 483
           EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V F E +WFKAGAQIFS+GGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 484 CPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            P LVHAQSILA+   QVVLMG   G+RI+GL  VG+G
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDG 183


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
           OS=Medicago falcata GN=CAB PE=2 SV=1
          Length = 266

 Score =  239 bits (610), Expect = 9e-62
 Identities = 116/158 (73%), Positives = 130/158 (82%)
 Frame = +1

Query: 124 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADP 303
           N LR+ V +  +R +M +E WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGLSADP
Sbjct: 28  NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 304 EAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLG 483
           EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V F E VWFKAG+QIFS+GGLDYLG
Sbjct: 88  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 484 CPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            P LVHAQSILA+   QVVLMG   G+RI+GL  VGEG
Sbjct: 148 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEG 185


>tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding
           protein (Fragment) OS=Brassica napus GN=Lhcb3*1 PE=4
           SV=1
          Length = 202

 Score =  238 bits (608), Expect = 2e-61
 Identities = 115/160 (71%), Positives = 130/160 (81%)
 Frame = +1

Query: 118 TKNALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSA 297
           T N LR+ V +   + +M ++ WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGLSA
Sbjct: 25  TFNPLRDAVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSA 84

Query: 298 DPEAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDY 477
           DPEAFAKNRALEVIH RWAMLGALGCI PEV QK++ V F E VWFKAG+QIFS+GGLDY
Sbjct: 85  DPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDY 144

Query: 478 LGCPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
           LG P LVHAQSILA+   QV+LMG   G+RI+GL  VGEG
Sbjct: 145 LGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEG 184


>tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26482 PE=4 SV=1
          Length = 266

 Score =  238 bits (607), Expect = 2e-61
 Identities = 114/156 (73%), Positives = 127/156 (81%)
 Frame = +1

Query: 130 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADPEA 309
           LR+       R++M+ E WYGPDR KYLGPFS +TPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30  LRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 310 FAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLGCP 489
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V F E VWFKAGAQIFS GGLDYLG P
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 490 YLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            LVHAQSILA+   QVVLMG   GYRI+GL  VG+G
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDG 185


>tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplast
           chlorophyll-a/b binding protein) OS=Pisum sativum
           GN=Lhcb3*1 PE=2 SV=1
          Length = 265

 Score =  238 bits (606), Expect = 3e-61
 Identities = 114/158 (72%), Positives = 130/158 (82%)
 Frame = +1

Query: 124 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSDRTPSYLKGEFPGDYGWDTAGLSADP 303
           N LR+ V +  ++ +M ++ WYGPDR KYLGPFS +TPSYL GEFPGDYGWDTAGLSADP
Sbjct: 27  NPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 304 EAFAKNRALEVIHSRWAMLGALGCICPEVAQKYLNVSFTEAVWFKAGAQIFSQGGLDYLG 483
           EAFAKNRALEVIH RWAMLGALGCI PEV QK++ V F E VWFKAG+QIFS+GGLDYLG
Sbjct: 87  EAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 484 CPYLVHAQSILAIWACQVVLMGAA*GYRIDGLS*VGEG 597
            P LVHAQSILA+   Q+VLMG   G+RI+GL  VGEG
Sbjct: 147 NPNLVHAQSILAVLGFQIVLMGLVEGFRINGLPDVGEG 184