BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962644|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_G19, 5'
         (603 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6YZW0|ARFU_ORYSJ Auxin response factor 21 OS=Oryza sativa su...    30   7.2  
sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=...    30   7.3  
sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Sacchar...    30   9.4  

>sp|Q6YZW0|ARFU_ORYSJ Auxin response factor 21 OS=Oryza sativa
           subsp. japonica GN=ARF21 PE=2 SV=2
          Length = 1116

 Score = 30.4 bits (67), Expect = 7.2
 Identities = 18/70 (25%), Positives = 38/70 (54%)
 Frame = -2

Query: 353 HQLYSILLISLQPQQPITADQDQHLVLILYAAINASLVLKLMHKVMKILQYLYTDHIHTN 174
           HQ+   LL +LQPQQP+ ++Q + L+ +    IN+        + +++     + H ++N
Sbjct: 659 HQMKLQLLKALQPQQPLISEQQKMLLDLQQQVINSQ---SAPQQCVQVTNQAISLH-NSN 714

Query: 173 ILSFPNQLRL 144
            + +P Q ++
Sbjct: 715 TIQYPTQQKV 724


>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus
           musculus GN=Fubp1 PE=1 SV=1
          Length = 651

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -1

Query: 234 ANAQGDENIAV-PLYRSHTHQHIIVPQPAAPIRSN*CIAGTEANAQGDENIAVP 76
           A A  D N A    Y +H +Q    P PAAP  +    A T+ N QGD+    P
Sbjct: 522 AKAGADPNSAAWAAYYAHYYQQQAQPPPAAPAGAP---ATTQTNGQGDQQAPAP 572


>sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase
           OS=Saccharopolyspora erythraea (strain NRRL 23338)
           GN=apt PE=3 SV=1
          Length = 182

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = -3

Query: 601 FPAISAEEARAGVLGEV-------GIVGLRLRLEEPVEHPHQASRDDHRLRYG 464
           F  ++  EAR  +LG         G+VGLR    +P + P  A R D+RL YG
Sbjct: 61  FDVVAGVEARGFLLGAAVAQAHGTGVVGLR----KPGKLPEVAHRVDYRLEYG 109

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962644|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_G19, 5'
         (603 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2W2P2|B2W2P2_PYRTR Putative uncharacterized protein OS=Pyren...    36   1.5  
tr|Q120B3|Q120B3_POLSJ Carbamoyl-phosphate synthase L chain, ATP...    35   4.4  
tr|A0DX51|A0DX51_PARTE Chromosome undetermined scaffold_68, whol...    34   5.7  
tr|A0BZG3|A0BZG3_PARTE Chromosome undetermined scaffold_139, who...    34   5.7  
tr|A7GTA7|A7GTA7_BACCN Spore coat assembly protein SafA OS=Bacil...    34   7.6  

>tr|B2W2P2|B2W2P2_PYRTR Putative uncharacterized protein
           OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
           GN=PTRG_03690 PE=4 SV=1
          Length = 471

 Score = 36.2 bits (82), Expect = 1.5
 Identities = 18/52 (34%), Positives = 32/52 (61%)
 Frame = -1

Query: 243 GTEANAQGDENIAVPLYRSHTHQHIIVPQPAAPIRSN*CIAGTEANAQGDEN 88
           GTEA+A+G+++    +Y +H +Q        AP+     I GT+A+A+G+E+
Sbjct: 101 GTEADAEGEDDDTEAMYHAHDYQ--------APVVDTDNILGTDADAEGEED 144


>tr|Q120B3|Q120B3_POLSJ Carbamoyl-phosphate synthase L chain,
           ATP-binding OS=Polaromonas sp. (strain JS666 / ATCC
           BAA-500) GN=Bpro_5270 PE=4 SV=1
          Length = 665

 Score = 34.7 bits (78), Expect = 4.4
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 29  AGWGTIICWCVCDLYRGTAIFSSPCALASVPAMH*LLRIGAAGW 160
           AGW  + CW + D + G  + S P   A  PA+  +L+ G A W
Sbjct: 472 AGWSALGCWTLWDGFTGWRLSSGPIQAAPQPAL--VLKAGVAEW 513


>tr|A0DX51|A0DX51_PARTE Chromosome undetermined scaffold_68, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00021250001 PE=4 SV=1
          Length = 537

 Score = 34.3 bits (77), Expect = 5.7
 Identities = 20/97 (20%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
 Frame = -2

Query: 332 LISLQPQQPITADQDQHLVLILYAAINASLVLKLMHKVMKILQY-LYTDHIHTNILSFPN 156
           L+ ++  Q    D ++++  +   A++   +L+++      + Y + ++H H N LS  +
Sbjct: 134 LVQMENFQKSNPDNEKYISWLQKVALDHPNILRIVEIFQDRMNYQVVSEHFHGNYLS--D 191

Query: 155 QLRLYAAINASLVLKLMHKVMKILQYLYTDH-IHTNI 48
            +   A ++ SLV ++  +++ ++QYL++ + +H N+
Sbjct: 192 LIIGEAKVSKSLVSQIYEQIISVMQYLHSKNLVHGNL 228


>tr|A0BZG3|A0BZG3_PARTE Chromosome undetermined scaffold_139, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00033783001 PE=4 SV=1
          Length = 387

 Score = 34.3 bits (77), Expect = 5.7
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
 Frame = -2

Query: 344 YSILLISLQPQQPITADQDQHLVLILYAAINASLVLKLMHKVMKILQ-----------YL 198
           Y I   SL    PI+    Q +  ILY+A  +++     HK + +LQ           YL
Sbjct: 67  YQIYNQSLNQNTPISQSVSQRIPTILYSASTSNM---FTHKCLFVLQQQFYLLACLLTYL 123

Query: 197 YTDHIHTNILSFPNQLRLYAAINASLVLKLMHKVMKILQY-LYTDHIHTNILSFPNQLRL 21
           ++ + H NIL +  Q+ L++ IN        + ++ +LQY  +     T  LS   Q  L
Sbjct: 124 FSFNNHYNILIY-LQIHLFSIINQE---SPSYYIIYLLQYSQFQLQFKTTFLSNQFQQNL 179

Query: 20  HNS 12
            NS
Sbjct: 180 SNS 182


>tr|A7GTA7|A7GTA7_BACCN Spore coat assembly protein SafA OS=Bacillus
           cereus subsp. cytotoxis (strain NVH 391-98)
           GN=Bcer98_3142 PE=4 SV=1
          Length = 674

 Score = 33.9 bits (76), Expect = 7.6
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = -1

Query: 285 TPCVDTIRSN*CIAGTEANAQGDENIAVPLYRSHTHQHIIVPQPAAPIRSN*CIAGTEAN 106
           TP +  ++ N  +   +   +  ENIA P  +    ++I  PQ       N  IA  +  
Sbjct: 193 TPQIHKVKPN-HMKAPQVKKENAENIAAPQVKKENTENIAAPQVKKENTEN--IAAPQVK 249

Query: 105 AQGDENIAVPLYRSHTHQHIIVPQ 34
            +  ENIA P  +     +I  PQ
Sbjct: 250 KENTENIAAPQVKKENMGNIAAPQ 273



 Score = 33.5 bits (75), Expect = 9.9
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = -1

Query: 249 IAGTEANAQGDENIAVPLYRSHTHQHIIVPQPAAPIRSN*CIAGTEANAQGDENIAVPLY 70
           IA  +   +  ENIA P  +    ++I  PQ       N  IA  +   +   NIA P  
Sbjct: 217 IAAPQVKKENTENIAAPQVKKENTENIAAPQVKKENTEN--IAAPQVKKENMGNIAAPQV 274

Query: 69  RSHTHQHIIVPQ 34
           +    ++I  PQ
Sbjct: 275 KKENTENIAAPQ 286