DK962653 |
Clone id |
TST39A01NGRL0014_H04 |
Library |
TST39 |
Length |
659 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_H04. 5' end sequence. |
Accession |
DK962653 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL84Contig2 |
Sequence |
CCTGGTGCTCGTTACGGCGAGCACGTCTTTGGAGTAGCACATATTTTTGCCTCATTCAAT GACACCTTCGTGCATGTCACAGATCTGTCTGGCAAGGAGACGCTTGCTCGAGTTACTGGT GGCATGAAGGTGAAAGCTGACAGAGACGAGTCTTCTCCGTACGCAGCCATGCTTGCTGCT CAGGATGTGGCGCAGAAGTGCAAGGAGCTGGGGATCACCGCTCTGCACATCAAGCTGCGA GCAACTGGGGGTAACAAGACGAAGACGCCTGGTCCTGGCGCACAGTCTGCACTGAGAGCA CTTGCTCGGTCTGGCATGCGGATTGGACGAATTGAGGATGTCACACCTATCCCCACAGAC AGCACAAGAAGGAAAGGTGGTAGAAGAGGTCGCCGGCTGTAAGGACAGCTGTAGACGCGA TTGGATTTTCTTTGAACTATCTTTGCTTAAGGATGAATGTTTTTGTTCACTCAAGCGAGC CTGAGGTAGACGTCCTAGCTCCAATGGAACTTGTTATGATTGGATTATTGCAATAGGCAA GTTTGGAAATTTTTGCTGAAGAGTCATGTTGGTTTTGGTTACATTGATTATCATGGTCCC AATTTTGTATAGGCTTCTTGCAGTGTCTTTACTCTGCTATGTTCTGGCTTCTATGATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46295 |
Definition |
sp|P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas reinhardtii |
Align length |
122 |
Score (bit) |
199.0 |
E-value |
8.0e-51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TTN2 |
Definition |
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
122 |
Score (bit) |
202.0 |
E-value |
1.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962653|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_H04, 5' (659 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella paten... 202 1e-50 tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella paten... 200 7e-50 tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, who... 200 7e-50 tr|A8J768|A8J768_CHLRE Ribosomal protein S14 OS=Chlamydomonas re... 199 1e-49 tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea m... 198 2e-49 tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensi... 198 2e-49 tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whol... 198 2e-49 tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome... 198 2e-49 tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis... 198 2e-49 tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea... 198 3e-49 tr|A9PBW7|A9PBW7_POPTR Putative uncharacterized protein OS=Popul... 198 3e-49 tr|A9P8E9|A9P8E9_POPTR Putative uncharacterized protein OS=Popul... 198 3e-49 tr|A9PDF0|A9PDF0_POPTR Putative uncharacterized protein OS=Popul... 197 4e-49 tr|A9PIB5|A9PIB5_POPTR Putative uncharacterized protein OS=Popul... 197 6e-49 tr|A9PDW2|A9PDW2_POPTR Putative uncharacterized protein OS=Popul... 196 8e-49 tr|B4FJ48|B4FJ48_MAIZE Putative uncharacterized protein OS=Zea m... 196 1e-48 tr|B4FBS3|B4FBS3_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 196 1e-48 tr|B6UH09|B6UH09_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 196 1e-48 tr|Q7XSA6|Q7XSA6_ORYSJ Os02g0534800 protein OS=Oryza sativa subs... 195 2e-48 tr|Q6H7T1|Q6H7T1_ORYSJ Os02g0162500 protein OS=Oryza sativa subs... 195 2e-48 tr|Q01IS6|Q01IS6_ORYSA OSIGBa0134P10.10 protein (OSIGBa0137L20.1... 195 2e-48 tr|B8LKR8|B8LKR8_PICSI Putative uncharacterized protein OS=Picea... 195 2e-48 tr|B8AI71|B8AI71_ORYSI Putative uncharacterized protein OS=Oryza... 195 2e-48 tr|B6T522|B6T522_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 195 2e-48 tr|A6MZM7|A6MZM7_ORYSI 40S ribosomal protein S14 (Fragment) OS=O... 195 2e-48 tr|A3ATP4|A3ATP4_ORYSJ Putative uncharacterized protein OS=Oryza... 195 2e-48 tr|A2XT84|A2XT84_ORYSI Putative uncharacterized protein OS=Oryza... 195 2e-48 tr|Q1H555|Q1H555_ARATH At3g11510 OS=Arabidopsis thaliana PE=2 SV=1 194 4e-48 tr|B6T281|B6T281_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 194 4e-48 tr|B6UHC8|B6UHC8_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 194 5e-48
>tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198161 PE=3 SV=1 Length = 151
Score = 202 bits (514), Expect = 1e-50 Identities = 104/122 (85%), Positives = 107/122 (87%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGMKVKADRDE+SPYAAMLAA Sbjct: 19 PSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAA 78
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDVAQ+CKELGITALHIKLRA AQSALRALARSGMRIGRIEDVTPIPTD Sbjct: 79 QDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTD 138
Query: 361 ST 366 ST Sbjct: 139 ST 140
>tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223910 PE=4 SV=1 Length = 151
Score = 200 bits (508), Expect = 7e-50 Identities = 103/122 (84%), Positives = 106/122 (86%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGMKVKADRDE+SPYAAMLAA Sbjct: 19 PSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAA 78
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDVAQ+CKELGITALHIKLRA AQSALRALARS MRIGRIEDVTPIPTD Sbjct: 79 QDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSNMRIGRIEDVTPIPTD 138
Query: 361 ST 366 ST Sbjct: 139 ST 140
>tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003445001 PE=3 SV=1 Length = 156
Score = 200 bits (508), Expect = 7e-50 Identities = 102/122 (83%), Positives = 106/122 (86%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKVKADRDESSPYAAMLAA Sbjct: 24 PTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAA 83
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDVAQ+CKELGITALHIKLRA AQSALRALARSGMRIGRIEDVTPIPTD Sbjct: 84 QDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTD 143
Query: 361 ST 366 ST Sbjct: 144 ST 145
>tr|A8J768|A8J768_CHLRE Ribosomal protein S14 OS=Chlamydomonas reinhardtii GN=RPS14 PE=3 SV=1 Length = 153
Score = 199 bits (507), Expect = 1e-49 Identities = 102/122 (83%), Positives = 107/122 (87%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEHVFGVAHIFASFNDTFVHVTDLSG+ET++RVTGGMKVKADRDESSPYAAMLAA Sbjct: 21 PTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAA 80
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDVAQKCKELGITALHIKLRA AQSALRALAR+GM+IGRIEDVTPIPTD Sbjct: 81 QDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTD 140
Query: 361 ST 366 ST Sbjct: 141 ST 142
>tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 151
Score = 198 bits (504), Expect = 2e-49 Identities = 99/122 (81%), Positives = 106/122 (86%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKVKADRDESSPYAAMLA+ Sbjct: 19 PAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAS 78
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDVAQ+CKELGITALHIKLRA AQSALRALARSGM+IGRIEDVTP+PTD Sbjct: 79 QDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTD 138
Query: 361 ST 366 ST Sbjct: 139 ST 140
>tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 150
Score = 198 bits (504), Expect = 2e-49 Identities = 100/122 (81%), Positives = 106/122 (86%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEHVFGVAHIFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAA Sbjct: 18 PTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAA 77
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDVAQ+CKELGITALHIKLRA AQSALRALARSGM+IGRIEDVTPIPTD Sbjct: 78 QDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTD 137
Query: 361 ST 366 ST Sbjct: 138 ST 139
>tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037325001 PE=3 SV=1 Length = 192
Score = 198 bits (504), Expect = 2e-49 Identities = 100/122 (81%), Positives = 106/122 (86%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKVKADRDESSPYAAMLAA Sbjct: 60 PTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAA 119
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDV+Q+CKELG+TALHIKLRA AQSALRALARSGMRIGRIEDVTPIPTD Sbjct: 120 QDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTD 179
Query: 361 ST 366 ST Sbjct: 180 ST 181
>tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021579001 PE=3 SV=1 Length = 173
Score = 198 bits (504), Expect = 2e-49 Identities = 101/122 (82%), Positives = 105/122 (86%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEH FGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKVKADRDESSPYAAMLAA Sbjct: 41 PTVRDGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAA 100
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDVAQ+CKELGITALHIKLRA AQSALRALARSGMRIGRIEDVTPIPTD Sbjct: 101 QDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTD 160
Query: 361 ST 366 ST Sbjct: 161 ST 162
>tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018475 PE=3 SV=1 Length = 150
Score = 198 bits (504), Expect = 2e-49 Identities = 100/122 (81%), Positives = 106/122 (86%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKVKADRDESSPYAAMLAA Sbjct: 18 PTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAA 77
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDV+Q+CKELG+TALHIKLRA AQSALRALARSGMRIGRIEDVTPIPTD Sbjct: 78 QDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTD 137
Query: 361 ST 366 ST Sbjct: 138 ST 139
>tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 151
Score = 198 bits (503), Expect = 3e-49 Identities = 102/122 (83%), Positives = 106/122 (86%) Frame = +1
Query: 1 PGARYGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAA 180 P R GE VFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAA Sbjct: 19 PTVREGEQVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAA 78
Query: 181 QDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMRIGRIEDVTPIPTD 360 QDVAQ+CKELG+TALHIKLRA AQSALRALARSGM+IGRIEDVTPIPTD Sbjct: 79 QDVAQRCKELGLTALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTD 138
Query: 361 ST 366 ST Sbjct: 139 ST 140
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