DK962666 |
Clone id |
TST39A01NGRL0014_H18 |
Library |
TST39 |
Length |
498 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_H18. 5' end sequence. |
Accession |
DK962666 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL154Contig1 |
Sequence |
ATCGAGGGCGGGCTTCGGGGTTGCTGCATAAACCCTATTCAAAGGTAAGCTTGAGCTTTG GGTCTGTTAGCGATGGGGAGGGTCATCACAGGCCAAAGGAAGGGAGCAGGCTCGATCTTT AGAGCCCACACACACAGGCACAAGGGCCCTGCTCGTTTTACATCTCTAGACTACTCACAA AGTAATGGGTACATAAAGGGTGTCGTCTCCAACATTGTTCACGATTCTGGCAAAGGAGCA CCTCTCTGCAAGGTGACCTTCCGCCACCCCTTCCGCTTTAAACACCAAAATGAGCGCTTC ATTGCTGCATAGGGTATGTACTCTGGCCAGTTTGTTTACAGTGGAAAGAAGGCAACCCTG TCCATTGGCAATGTTCTTCCTCTCAAGTCGGTGCCAGATGGCGCTGTGGTTTGTAATGTC TAACACCGAGTGGGGGATCGTGGCTCTTTTGCTAGAGCTTCTGGTGACTATGTAATCGTT GTCAGCCATAATCCGAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29766 |
Definition |
sp|P29766|RL8_SOLLC 60S ribosomal protein L8 OS=Solanum lycopersicum |
Align length |
141 |
Score (bit) |
227.0 |
E-value |
2.0e-59 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RZ45 |
Definition |
tr|A9RZ45|A9RZ45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
140 |
Score (bit) |
247.0 |
E-value |
3.0e-64 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962666|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_H18, 5' (498 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RZ45|A9RZ45_PHYPA Predicted protein OS=Physcomitrella paten... 247 3e-64 tr|Q2QNF3|Q2QNF3_ORYSJ Os12g0567700 protein OS=Oryza sativa subs... 231 1e-59 tr|A2ZLS7|A2ZLS7_ORYSI Putative uncharacterized protein OS=Oryza... 231 1e-59 tr|A7QDZ9|A7QDZ9_VITVI Chromosome chr4 scaffold_83, whole genome... 230 3e-59 tr|B6TGT0|B6TGT0_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2... 229 4e-59 tr|B4FJS6|B4FJS6_MAIZE Putative uncharacterized protein OS=Zea m... 229 4e-59 tr|B4F9R4|B4F9R4_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2... 229 4e-59 tr|B6TIQ9|B6TIQ9_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2... 229 5e-59 tr|Q2XTD6|Q2XTD6_SOLTU Ribosomal protein L2-like OS=Solanum tube... 227 2e-58 tr|A7P133|A7P133_VITVI Chromosome chr19 scaffold_4, whole genome... 227 2e-58 tr|A5AW13|A5AW13_VITVI Putative uncharacterized protein (Chromos... 227 2e-58 tr|A9PBZ5|A9PBZ5_POPTR Putative uncharacterized protein OS=Popul... 225 1e-57 tr|A9PCT0|A9PCT0_POPTR Putative uncharacterized protein OS=Popul... 223 3e-57 tr|Q2HRD6|Q2HRD6_MEDTR Translation protein SH3-like OS=Medicago ... 220 3e-56 tr|Q9FEZ7|Q9FEZ7_SOYBN Ribosomal protein L2 OS=Glycine max GN=rp... 219 4e-56 tr|Q6EMI5|Q6EMI5_BRAJU Ribosomal protein L2 (Fragment) OS=Brassi... 216 4e-55 tr|B6RB82|B6RB82_HALDI Ribosomal protein l OS=Haliotis discus di... 192 1e-47 tr|B8MBP1|B8MBP1_9EURO 60S ribosomal protein L8, putative OS=Tal... 191 2e-47 tr|B2WK16|B2WK16_PYRTR 60S ribosomal protein L2 OS=Pyrenophora t... 189 6e-47 tr|Q1DUH9|Q1DUH9_COCIM Putative uncharacterized protein OS=Cocci... 188 1e-46 tr|A7TQR3|A7TQR3_VANPO Putative uncharacterized protein OS=Vande... 188 1e-46 tr|B8NRH6|B8NRH6_ASPFL 60S ribosomal protein L8, putative OS=Asp... 187 2e-46 tr|B5KFK9|B5KFK9_TAEGU Putative ribosomal protein L8 OS=Taeniopy... 187 2e-46 tr|B5FXQ0|B5FXQ0_TAEGU Putative ribosomal protein L8 OS=Taeniopy... 187 2e-46 tr|B5FXP9|B5FXP9_TAEGU Putative ribosomal protein L8 (Fragment) ... 187 2e-46 tr|B5FXP8|B5FXP8_TAEGU Putative ribosomal protein L8 (Fragment) ... 187 2e-46 tr|B6QG48|B6QG48_PENMA 60S ribosomal protein L8, putative OS=Pen... 187 2e-46 tr|B6QG47|B6QG47_PENMA 60S ribosomal protein L8, putative OS=Pen... 187 2e-46 tr|A6RFU9|A6RFU9_AJECN 60S ribosomal protein L2 OS=Ajellomyces c... 187 2e-46 tr|Q4WTW7|Q4WTW7_ASPFU 60S ribosomal protein L8, putative OS=Asp... 186 4e-46
>tr|A9RZ45|A9RZ45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161945 PE=4 SV=1 Length = 260
Score = 247 bits (630), Expect = 3e-64 Identities = 118/140 (84%), Positives = 128/140 (91%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGSIFR+HTHR KGPA+F SLDY++ NGYIKGVVS +VHDSG+GAPLCK Sbjct: 1 MGRVIRAQRKGAGSIFRSHTHRRKGPAQFRSLDYAERNGYIKGVVSEVVHDSGRGAPLCK 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFRFK Q ERFIAA GMYSGQFVY GKKATLSIGNVLPL+SVP+GAVVCNV HR+ Sbjct: 61 VTFRHPFRFKRQKERFIAAEGMYSGQFVYCGKKATLSIGNVLPLRSVPEGAVVCNVEHRM 120
Query: 433 GDRGSFARASGDYVIVVSHN 492 GDRG+FARASGDY IVVSHN Sbjct: 121 GDRGAFARASGDYAIVVSHN 140
>tr|Q2QNF3|Q2QNF3_ORYSJ Os12g0567700 protein OS=Oryza sativa subsp. japonica GN=Os12g0567700 PE=4 SV=1 Length = 261
Score = 231 bits (589), Expect = 1e-59 Identities = 105/141 (74%), Positives = 124/141 (87%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF SLD+ + NGY+KGVV++I+HD G+GAPL K Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY G++ATLSIGNVLP++SVP+GAVVCNV H V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FARASGDY IV+SHNP Sbjct: 121 GDRGVFARASGDYAIVISHNP 141
>tr|A2ZLS7|A2ZLS7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38771 PE=4 SV=1 Length = 261
Score = 231 bits (589), Expect = 1e-59 Identities = 105/141 (74%), Positives = 124/141 (87%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF SLD+ + NGY+KGVV++I+HD G+GAPL K Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY G++ATLSIGNVLP++SVP+GAVVCNV H V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FARASGDY IV+SHNP Sbjct: 121 GDRGVFARASGDYAIVISHNP 141
>tr|A7QDZ9|A7QDZ9_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036802001 PE=4 SV=1 Length = 260
Score = 230 bits (586), Expect = 3e-59 Identities = 105/141 (74%), Positives = 122/141 (86%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF SLD+ + NGY+KGVV+ I+HD G+GAPL + Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY GKKATL +GNVLPL+S+P+GAVVCNV H V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLIVGNVLPLRSIPEGAVVCNVEHHV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FARASGDY IVVSHNP Sbjct: 121 GDRGVFARASGDYAIVVSHNP 141
>tr|B6TGT0|B6TGT0_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2 SV=1 Length = 261
Score = 229 bits (585), Expect = 4e-59 Identities = 103/141 (73%), Positives = 123/141 (87%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF SLD+ + NGY+KGVV++++HD G+GAPL K Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY G++ATLSIGNVLPL+ +P+GAVVCNV H V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPLRGIPEGAVVCNVEHHV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FARASGDY IV+SHNP Sbjct: 121 GDRGVFARASGDYAIVISHNP 141
>tr|B4FJS6|B4FJS6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 160
Score = 229 bits (585), Expect = 4e-59 Identities = 103/141 (73%), Positives = 123/141 (87%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF SLD+ + NGY+KGVV++++HD G+GAPL K Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY G++ATLSIGNVLPL+ +P+GAVVCNV H V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPLRGIPEGAVVCNVEHHV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FARASGDY IV+SHNP Sbjct: 121 GDRGVFARASGDYAIVISHNP 141
>tr|B4F9R4|B4F9R4_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2 SV=1 Length = 260
Score = 229 bits (585), Expect = 4e-59 Identities = 103/141 (73%), Positives = 123/141 (87%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF SLD+ + NGY+KGVV++++HD G+GAPL K Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY G++ATLSIGNVLPL+ +P+GAVVCNV H V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPLRGIPEGAVVCNVEHHV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FARASGDY IV+SHNP Sbjct: 121 GDRGVFARASGDYAIVISHNP 141
>tr|B6TIQ9|B6TIQ9_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2 SV=1 Length = 261
Score = 229 bits (584), Expect = 5e-59 Identities = 103/141 (73%), Positives = 123/141 (87%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF SLD+ + NGY+KGVV++++HD G+GAPL K Sbjct: 1 MGRVIHAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY G++ATLSIGNVLPL+ +P+GAVVCNV H V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPLRGIPEGAVVCNVEHHV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FARASGDY IV+SHNP Sbjct: 121 GDRGVFARASGDYAIVISHNP 141
>tr|Q2XTD6|Q2XTD6_SOLTU Ribosomal protein L2-like OS=Solanum tuberosum PE=2 SV=1 Length = 261
Score = 227 bits (579), Expect = 2e-58 Identities = 100/141 (70%), Positives = 122/141 (86%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF +LD+ + NGY+KGV++ ++HD G+GAPL + Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY GKKATL +GNVLPL+S+P+GAVVCNV H+V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FAR SGDY IV+SHNP Sbjct: 121 GDRGVFARCSGDYAIVISHNP 141
>tr|A7P133|A7P133_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027466001 PE=4 SV=1 Length = 260
Score = 227 bits (579), Expect = 2e-58 Identities = 103/141 (73%), Positives = 122/141 (86%) Frame = +1
Query: 73 MGRVITGQRKGAGSIFRAHTHRHKGPARFTSLDYSQSNGYIKGVVSNIVHDSGKGAPLCK 252 MGRVI QRKGAGS+F++HTH KGPARF SLD+ + NGY+KGVV++I+HD G+GAPL + Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAR 60
Query: 253 VTFRHPFRFKHQNERFIAA*GMYSGQFVYSGKKATLSIGNVLPLKSVPDGAVVCNV*HRV 432 VTFRHPFR+KHQ E F+AA GMY+GQFVY GKKA L +GNVLP++S+P+GAVVCNV H V Sbjct: 61 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRSIPEGAVVCNVEHHV 120
Query: 433 GDRGSFARASGDYVIVVSHNP 495 GDRG FARASGDY IVVSHNP Sbjct: 121 GDRGVFARASGDYAIVVSHNP 141
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