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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962690
Clone id TST39A01NGRL0014_I18
Library
Length 636
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_I18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TTCCTCCTCTGCGTAACATTTTGTGAAGCGAGGGACGATCTGCCGTGAAAGGGAGGTCGC
CATGGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCTCTCTCTCAACAACTACCGCTCC
AGCGACTACCTCCCGACTGTTCCCGCCAGCAATTCTTGGGCGGGAGGGCTCTCCGAGCAG
CGGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCTTCACCGTTCGCGCAACCGCCGATA
AGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAGCAAAGTCTAAGCTATCTAG
ATGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCTTGGGTTTGATGGACCCAGAGGGGC
CTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATGGAGAAATCATCAATGGAAGATATG
CAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTTGGCAAGGCTGGTCTCATCC
CTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCACCTCTAGGAACCTACA
ACTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCCCTCATGGGCTTTGCTG
AGCACCGAAGAGCACAGGATTATTATAAGCCTGGAT
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 142
Score (bit) 244.0
E-value 3.0e-64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962690|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_I18, 5'
         (636 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   244   3e-64
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   242   1e-63
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   107   7e-23
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   104   4e-22
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    86   2e-16
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    84   6e-16
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    79   3e-14
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    68   3e-11
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    65   2e-10
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    65   2e-10
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    64   5e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    64   7e-10
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    62   2e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    62   2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    62   2e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    62   3e-09
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    61   4e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    61   6e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    61   6e-09
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    60   7e-09
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    60   7e-09
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    60   9e-09
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    60   1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   2e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    59   2e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  244 bits (623), Expect = 3e-64
 Identities = 117/142 (82%), Positives = 124/142 (87%), Gaps = 2/142 (1%)
 Frame = +3

Query: 216 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 389
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 390 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 569
            YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 570 VLEMALMGFAEHRRAQDYYKPG 635
           VLEMALMGFAEHRR QD+ KPG
Sbjct: 157 VLEMALMGFAEHRRFQDWAKPG 178


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  242 bits (618), Expect = 1e-63
 Identities = 117/141 (82%), Positives = 123/141 (87%), Gaps = 3/141 (2%)
 Frame = +3

Query: 222 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 392
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL 
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 393 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 572
           YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 573 LEMALMGFAEHRRAQDYYKPG 635
           LEMALMGFAEHRR QD+ KPG
Sbjct: 160 LEMALMGFAEHRRFQDWAKPG 180


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  107 bits (266), Expect = 7e-23
 Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = +3

Query: 141 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 320
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 321 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 497
           FGFDPLGL  DPE         W +  E+++ R+AMLGA G   PE+L K G++   +  
Sbjct: 86  FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 498 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 635
            W+        G   Y+ D  TLF++E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176



 Score = 33.9 bits (76), Expect = 0.72
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +3

Query: 288 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 443
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  104 bits (259), Expect = 4e-22
 Identities = 67/166 (40%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = +3

Query: 141 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 320
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 321 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 497
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +  
Sbjct: 86  FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 498 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 635
            W+        G   Y+ D  TLFV+E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176



 Score = 33.9 bits (76), Expect = 0.72
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +3

Query: 288 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 443
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 58/165 (35%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
 Frame = +3

Query: 144 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 323
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 324 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 500
           GFDPLGL  DPE    F++       E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPENLRWFVQ------AELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 501 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 635
           W+        G   Y+A   TLFV+E  L  + E RR QD   PG
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPG 164


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 84.0 bits (206), Expect = 6e-16
 Identities = 53/136 (38%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
 Frame = +3

Query: 231 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 407
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE    F++       E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ------AELV 98

Query: 408 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 587
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 588 MGFAEHRRAQDYYKPG 635
             + E RR QD   PG
Sbjct: 150 FHYVEIRRWQDIKNPG 165


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 53/124 (42%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
 Frame = +3

Query: 267 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 443
           W    QS +YLDGSL GD GFDPL L  DPE    F++ D      ++NGR+AMLG  G 
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGM 89

Query: 444 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDY 623
           + PE+L KAGL+    A  W R   +P  G   Y+A   T   + M+   + E RR QD 
Sbjct: 90  LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDI 140

Query: 624 YKPG 635
             PG
Sbjct: 141 KNPG 144


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
 Frame = +3

Query: 294 YLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKA 470
           +LDGSLPGDFGFDPLGL  DP     F++  W R  E+I+GR+AML  +G      +G+A
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 471 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 632
                 T + WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDP 170


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
 Frame = +3

Query: 216 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLR 392
           FTV A A K   +       +     +LDGSLPGD+GFDPLGL  DP     F++  W R
Sbjct: 44  FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP----AFLK--WYR 97

Query: 393 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLF 569
             E+I+GR+AM   +G      +G+A      + + WF  G  P  +  +++     TL 
Sbjct: 98  EAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLL 144

Query: 570 VLEMALMGFAEHRRAQDYYKP 632
             ++ LMG+ E +R  D++ P
Sbjct: 145 GTQLILMGWVESKRWVDFFDP 165


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
 Frame = +3

Query: 267 WFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRY--GEIINGRYAMLGAVG 440
           W   +   SYLDGS PGDFGFD LGL       G +  +  RY   E+I+ R+AML   G
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGL-------GEVPANLERYKESELIHCRWAMLAVPG 101

Query: 441 AIAPEILGKAGLI-PQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQ 617
            I PE LG    +  QE A +    G    LG    W    T+  +E   + F EH+R+ 
Sbjct: 102 IIVPEALGLGNWVKAQEWAAI--PGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSM 159

Query: 618 D 620
           +
Sbjct: 160 E 160
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 167
Score (bit) 255.0
E-value 1.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962690|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_I18, 5'
         (636 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   255   1e-66
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   251   2e-65
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   248   2e-64
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   248   3e-64
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   245   1e-63
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   244   2e-63
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   241   2e-62
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   240   6e-62
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   237   4e-61
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   237   4e-61
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   234   3e-60
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   233   7e-60
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   233   7e-60
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   230   5e-59
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   230   5e-59
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   230   5e-59
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   230   6e-59
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   229   8e-59
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   201   3e-50
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   198   2e-49
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   197   6e-49
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   197   6e-49
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   186   1e-45
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   186   1e-45
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   184   3e-45
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   184   4e-45
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   180   6e-44
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr...   180   6e-44
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   180   6e-44
tr|A4QPK1|A4QPK1_ACEAT Chloroplast light-harvesting complex I pr...   179   1e-43

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  255 bits (652), Expect = 1e-66
 Identities = 128/167 (76%), Positives = 138/167 (82%), Gaps = 3/167 (1%)
 Frame = +3

Query: 144 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 314
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 315 GDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 494
           GD+GFDPLGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85  GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 495 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 635
           + WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  PG
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPG 191


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  251 bits (642), Expect = 2e-65
 Identities = 123/143 (86%), Positives = 129/143 (90%), Gaps = 3/143 (2%)
 Frame = +3

Query: 216 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 386
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 387 LRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 566
           L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 567 FVLEMALMGFAEHRRAQDYYKPG 635
           FVLEMALMGFAEHRR QDY  PG
Sbjct: 171 FVLEMALMGFAEHRRLQDYRYPG 193


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  248 bits (633), Expect = 2e-64
 Identities = 120/141 (85%), Positives = 125/141 (88%), Gaps = 1/141 (0%)
 Frame = +3

Query: 216 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 392
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 393 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 572
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 573 LEMALMGFAEHRRAQDYYKPG 635
            EMALMGFAEHRR QD+ KPG
Sbjct: 159 FEMALMGFAEHRRLQDWAKPG 179


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  248 bits (632), Expect = 3e-64
 Identities = 120/141 (85%), Positives = 125/141 (88%), Gaps = 1/141 (0%)
 Frame = +3

Query: 216 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 392
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 393 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 572
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 573 LEMALMGFAEHRRAQDYYKPG 635
            EMALMGFAEHRR QD+ KPG
Sbjct: 159 FEMALMGFAEHRRFQDWAKPG 179


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  245 bits (626), Expect = 1e-63
 Identities = 122/166 (73%), Positives = 131/166 (78%), Gaps = 3/166 (1%)
 Frame = +3

Query: 147 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 317
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 318 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 497
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 498 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 635
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPG
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPG 180


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  244 bits (624), Expect = 2e-63
 Identities = 122/166 (73%), Positives = 131/166 (78%), Gaps = 3/166 (1%)
 Frame = +3

Query: 147 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 317
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 318 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 497
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 498 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 635
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPG
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPG 180


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  241 bits (616), Expect = 2e-62
 Identities = 119/165 (72%), Positives = 129/165 (78%), Gaps = 2/165 (1%)
 Frame = +3

Query: 147 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 320
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 321 FGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 500
           +GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ 
Sbjct: 74  YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 501 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 635
           WF+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+  PG
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPG 178


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  240 bits (612), Expect = 6e-62
 Identities = 112/142 (78%), Positives = 121/142 (85%), Gaps = 2/142 (1%)
 Frame = +3

Query: 216 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 389
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 390 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 569
            YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91  AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 570 VLEMALMGFAEHRRAQDYYKPG 635
           V  MALMGFAEHRR QD+Y PG
Sbjct: 151 VFNMALMGFAEHRRLQDWYNPG 172


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  237 bits (605), Expect = 4e-61
 Identities = 114/142 (80%), Positives = 121/142 (85%), Gaps = 2/142 (1%)
 Frame = +3

Query: 216 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 389
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 390 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 569
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 570 VLEMALMGFAEHRRAQDYYKPG 635
           VLEMALMGFAEHRR QD+Y PG
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPG 178


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  237 bits (605), Expect = 4e-61
 Identities = 114/142 (80%), Positives = 121/142 (85%), Gaps = 2/142 (1%)
 Frame = +3

Query: 216 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 389
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 390 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 569
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 570 VLEMALMGFAEHRRAQDYYKPG 635
           VLEMALMGFAEHRR QD+Y PG
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPG 178