BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962736|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_K18, 5'
         (533 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P07383|TPES_PSEPU Tropinesterase OS=Pseudomonas putida PE=1 SV=1    30   5.6  
sp|Q5E320|RUMA_VIBF1 23S rRNA (uracil-5-)-methyltransferase rumA...    30   7.3  
sp|Q8T5Z4|RS19_BRABE 40S ribosomal protein S19 OS=Branchiostoma ...    30   7.3  

>sp|P07383|TPES_PSEPU Tropinesterase OS=Pseudomonas putida PE=1 SV=1
          Length = 272

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -2

Query: 295 LRTNTLIDHKRSQLSSGFIQPHNPHSISRLLMICEMLFTSLKLSGIKLTLACDKEPLD 122
           L   T+I H    +++G +   +P  +SRL++I   L T   L  +  T+     PLD
Sbjct: 101 LHNTTVIGHSMGSMTAGVLASIHPDKVSRLVLISTALKTGPVLEWVYDTVLQKDFPLD 158


>sp|Q5E320|RUMA_VIBF1 23S rRNA (uracil-5-)-methyltransferase rumA
           OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rumA
           PE=3 SV=2
          Length = 438

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 387 LVIYILEGVGIINRDPSYRPFYENEGHGIWFPPQSTPESNGNV 515
           L++Y++    ++N      PFY  +G  I+F P+   + N NV
Sbjct: 235 LILYLMPEADVLNHVRGEEPFYLIDGTKIYFTPKDFIQVNRNV 277


>sp|Q8T5Z4|RS19_BRABE 40S ribosomal protein S19 OS=Branchiostoma
           belcheri GN=RPS19 PE=2 SV=1
          Length = 147

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 19  LSDYVPSWYIIAHAEWSLHLHCGASVLAGAQCSLHRG 129
           L+ Y P W+ +  A  + HL+    V  GA C ++ G
Sbjct: 46  LAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGG 82

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962736|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_K18, 5'
         (533 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T3V5|A9T3V5_PHYPA Predicted protein OS=Physcomitrella paten...    64   4e-09
tr|Q1QC18|Q1QC18_PSYCK MscS Mechanosensitive ion channel OS=Psyc...    34   4.1  

>tr|A9T3V5|A9T3V5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_167911 PE=4 SV=1
          Length = 331

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
 Frame = +3

Query: 321 VFLDVMMRPGSMTEIPVQASHGLVIYILEGVGII--NR-DPSYRPFYENEGHGIWFP 482
           + LDV MRPGS   +P+    G++IYILEGVGI   NR +   RPFY+NEGHG++ P
Sbjct: 247 IMLDVRMRPGSEMSLPLDPRFGVIIYILEGVGIFEPNRFEEDERPFYQNEGHGLYIP 303


>tr|Q1QC18|Q1QC18_PSYCK MscS Mechanosensitive ion channel
           OS=Psychrobacter cryohalolentis (strain K5)
           GN=Pcryo_1004 PE=3 SV=1
          Length = 648

 Score = 34.3 bits (77), Expect = 4.1
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = -2

Query: 259 QLSSGFIQPHNPHS----ISRLLMICEMLFTSLKLSGIKLTLACDKEPLDAKNIEHLLT 95
           Q   GF++ H+  S    +SRLL I   LF  L ++ I    A   E +D++NIE  +T
Sbjct: 2   QTPFGFLRTHSLQSHAQFLSRLLFIIGSLFILLNMACISAYAASSTEEIDSRNIEETVT 60