DK962747
Clone id TST39A01NGRL0014_L05
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_L05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGCAAGAGGTATTGCGAGGTCAGCATGACGATGAGATTGAAGATGAACTATTACAACAAG
AACTGCCCACAGGAGGCTGGTGGTCTGCTTTGCTGAGAGCTCTGCAAGGTATTGTGGCAT
TGGGGAATGATGCTAAAGCTAGACTTCAAACAAGAGACAACTTGGAAAATCGAGATTTTT
ATTGAGGGTCAAGTTATTGTCAATAATAATAGCTCCACTAGGTAGATTTGAGACACATGT
AGAGTCCATGAGGCTATCCAAATGTTGCAAGTTTTAGTGTGTCAATGTGCATGCCTCAAC
TCGACTCTTATGTTTGACTTTTGGACTCGGTGCAATCTGCGACTGTGTTGCCAAGAAATC
ATATTGTCAAAGGATGCTGTCTTCACTTTGCGCACTCGGAAATTCTTCTGTTATGTAAAA
GGCATAAGAGGAGAGCTCGAGTGTGCATAATGGATTATTGTTCAAGGGATTTTTGTCTTT
GCTGCAATGGCATGGACCTAATGGTTTTGTCCAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5TBA9
Definition sp|Q5TBA9|FRY_HUMAN Protein furry homolog OS=Homo sapiens
Align length 64
Score (bit) 30.8
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962747|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_L05, 5'
(512 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5TBA9|FRY_HUMAN Protein furry homolog OS=Homo sapiens GN=FRY... 31 3.8
sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo s... 30 5.0
sp|P40987|CIN1_YEAST Chromosome instability protein 1 OS=Sacchar... 30 6.5

>sp|Q5TBA9|FRY_HUMAN Protein furry homolog OS=Homo sapiens GN=FRY PE=1
SV=1
Length = 3013

Score = 30.8 bits (68), Expect = 3.8
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -3

Query: 510 TKPLGPCHCSKDKNPLNNNPLCTLELSSYAFYITEEFPSAQSEDSIL*QYDFLATQSQIA 331
T+ GP C +D P N N +L+++ ++ F ++S + Q +A Q+ +A
Sbjct: 1801 TRAFGPLWCHEDITPKNQNSKSAEQLTNFLRHVVSVFKDSKSGFHLEHQLSEVALQTALA 1860

Query: 330 PSPK 319
S +
Sbjct: 1861 SSSR 1864


>sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo
sapiens GN=C1orf112 PE=2 SV=1
Length = 853

Score = 30.4 bits (67), Expect = 5.0
Identities = 29/103 (28%), Positives = 41/103 (39%)
Frame = -3

Query: 450 LCTLELSSYAFYITEEFPSAQSEDSIL*QYDFLATQSQIAPSPKVKHKSRVEACTLTH*N 271
LC +S Y E P L Q +L S+ PS S+ +
Sbjct: 248 LCRFFANSLLHYAKEFLPFLSDSCCTLHQL-YLQIHSKFPPSLYATRISKAHQEEIAGAF 306

Query: 270 LQHLDSLMDSTCVSNLPSGAIIIDNNLTLNKNLDFPSCLLFEV 142
L LD L+ S ++ P +++D+ L L L FP CLL V
Sbjct: 307 LVTLDPLI-SQLLTFQPFMQVVLDSKLDLPCELQFPQCLLLVV 348


>sp|P40987|CIN1_YEAST Chromosome instability protein 1
OS=Saccharomyces cerevisiae GN=CIN1 PE=1 SV=1
Length = 1014

Score = 30.0 bits (66), Expect = 6.5
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1

Query: 109 VLWHWGMMLKLDFKQETTWKIEIFIEGQVIVNNNSSTR*I*DTCRVHEAIQMLQVLVCQC 288
+L +W + + DF QE WK + Q +N +E I ++Q ++ QC
Sbjct: 579 ILKYWQLTGQNDFNQELFWKFVDIVSPQKKLN------------LYNEFIPIIQQIISQC 626

Query: 289 ACLNSTLMFDFWTRCNLRLCCQEI 360
LN T + + + L C+ I
Sbjct: 627 VSLNYTRIVQL-IKSDNELTCRSI 649


tr_hit_id A7Q1B7
Definition tr|A7Q1B7|A7Q1B7_VITVI Chromosome chr10 scaffold_43, whole genome shotgun sequence OS=Vitis vinifera
Align length 33
Score (bit) 35.8
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962747|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_L05, 5'
(512 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7Q1B7|A7Q1B7_VITVI Chromosome chr10 scaffold_43, whole genom... 36 1.3
tr|A9TGR0|A9TGR0_PHYPA ATP-binding cassette transporter, subfami... 35 1.6
tr|A9TJV3|A9TJV3_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.8
tr|Q8WQL9|Q8WQL9_LEUMA Male-specific beta-glycosidase OS=Leucoph... 33 6.2
tr|B6PSR2|B6PSR2_BRAFL Putative uncharacterized protein (Fragmen... 29 8.9

>tr|A7Q1B7|A7Q1B7_VITVI Chromosome chr10 scaffold_43, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028389001
PE=3 SV=1
Length = 1135

Score = 35.8 bits (81), Expect = 1.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3

Query: 75 GWWSALLRALQGIVALGNDAKARLQTRDNLENR 173
GWWS+L R ++G+ + A+ RLQ+ + E+R
Sbjct: 1094 GWWSSLYRMIEGLAVMSRLARNRLQSENGFEDR 1126


>tr|A9TGR0|A9TGR0_PHYPA ATP-binding cassette transporter, subfamily C,
member 11, group MRP protein PpABCC11 OS=Physcomitrella
patens subsp. patens GN=ppabcc11 PE=3 SV=1
Length = 1630

Score = 35.4 bits (80), Expect = 1.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3

Query: 75 GWWSALLRALQGIVALGNDAKARLQTRDNLENRDF 179
GWWSAL R L+G +G +A+ R+ + E D+
Sbjct: 1585 GWWSALTRVLEGFALMGREARNRISHNQDREAFDW 1619


>tr|A9TJV3|A9TJV3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_146694 PE=4 SV=1
Length = 575

Score = 33.9 bits (76), Expect = 4.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1

Query: 260 WIASWTLHV-SQIYLVELLLLTIT*PSIKISIFQVVSCLKSSFSIIPQCHNTLQSSQQSR 84
W WT+ + +Y V L+ LT+ S+ + F+ SC +SF+ I QC
Sbjct: 89 WGRFWTILIFGVVYFVGLVTLTL---SVTVDTFKPPSCTHTSFAGIQQC----------- 134

Query: 83 PPASCGQ 63
PPA+ GQ
Sbjct: 135 PPATAGQ 141


>tr|Q8WQL9|Q8WQL9_LEUMA Male-specific beta-glycosidase OS=Leucophaea
maderae PE=2 SV=1
Length = 534

Score = 33.5 bits (75), Expect = 6.2
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3

Query: 246 DSTCVSNLPSGAIIIDNNLTLNKNLDFPSCLLF 148
D+ C++++PS AI+ DNN+ L NL FP LF
Sbjct: 15 DAHCLADIPSEAIL-DNNIPLINNLTFPDGFLF 46


>tr|B6PSR2|B6PSR2_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_256114 PE=4 SV=1
Length = 223

Score = 28.9 bits (63), Expect(2) = 8.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3

Query: 357 NHIVKGCCLHFAHSEILLLCKRHKRRARVCIMDYCSRDFCLCCNGMDL 500
N K CC + C+RH+ + C CSR F LCC +L
Sbjct: 78 NCCCKRCCC------CRVYCRRHRCESSTCCKTICSR-FWLCCFSSEL 118



Score = 23.9 bits (50), Expect(2) = 8.9
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2

Query: 263 CCKF*CVNVHASTRLLCL--TFGLGAICDCVAKKSYC 367
CCK C R C TFG G CD + S C
Sbjct: 43 CCKRCCCCRVYCRRHRCKSSTFGCGCSCDMTRRMSNC 79