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NBDC - LSDB Archive
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DK962754
Clone id TST39A01NGRL0014_L12
Library
Length 583
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_L12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AGCAAATGTAAGCGGAAGTGTGTGGCGTGCTGCTCCGAGCTACTCCGACACAACCAAAAA
GCCAGAAAGAGGAGGGCGAGAGATGGTGGCAGCAGTAGCCCAACGTGTTGCATCGACAGC
GATGAAGGAACCGCTGGGCCTTAGTCCTAACTCTTCCCTGGGCTTCACATGCAGCGGCCT
CTCCGGCCACAGACTTTTCCGTGCTGCCCAGAATGTTAGCCGCATCCATTGCGCGACAGC
CGCCGTTGTGCCCAAGAAGAAGGATAACCTTCTGGCTGTTGCCGAACAACACTTCCTTCG
TGCCACTGAAAACCCCCTGGAGGGCCTCTCCTTTTCTATGGAAGAGTTCTCCCAAGCTCT
TTCCAAGTATGACTTCAACTTCGAGATCGGACAGACGGTTAAAGGAACTGTTTTTTTGGC
CAACAACAATGGGGCCTTGGTTGATATTGGAGCTAAAGCTCCTGCATTTTTACCTACAAG
CGAGGCCTCAATTCTGAGAATAAAGCATGTAGAAGAAGTAGGGCTTTTCCCGGGACTAGA
AGATGATTTTTATGTCATGAAATCTGATGATGACCACGGACGG
■■Homology search results ■■ -
sp_hit_id P29344
Definition sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea
Align length 163
Score (bit) 105.0
E-value 1.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962754|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_L12, 5'
         (583 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=S...   105   1e-22
sp|P46228|RS1_SYNP6 30S ribosomal protein S1 OS=Synechococcus sp...    75   3e-13
sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A OS=Synec...    73   9e-13
sp|P74142|RS1B_SYNY3 30S ribosomal protein S1 homolog B OS=Synec...    60   1e-08
sp|O33698|RS1_SYNE7 30S ribosomal protein S1 OS=Synechococcus el...    50   8e-06
sp|P51345|RR1_PORPU 30S ribosomal protein S1, chloroplastic OS=P...    50   1e-05
sp|Q1XDE2|RR1_PORYE 30S ribosomal protein S1, chloroplastic OS=P...    48   4e-05
sp|O06147|RS1_MYCTU 30S ribosomal protein S1 OS=Mycobacterium tu...    39   0.015
sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium le...    39   0.015
sp|Q9Z8M3|RS1_CHLPN 30S ribosomal protein S1 OS=Chlamydia pneumo...    36   0.12 
sp|Q83E09|RS1_COXBU 30S ribosomal protein S1 OS=Coxiella burneti...    35   0.36 
sp|P50889|RS1_LEULA 40S ribosomal protein S1 OS=Leuconostoc lact...    34   0.47 
sp|O84100|RS1_CHLTR 30S ribosomal protein S1 OS=Chlamydia tracho...    34   0.47 
sp|P38016|RS1_CHLMU 30S ribosomal protein S1 OS=Chlamydia murida...    34   0.47 
sp|A5VVL2|DAP_BRUO2 D-aminopeptidase OS=Brucella ovis (strain AT...    34   0.47 
sp|A6WYS5|DAP_OCHA4 D-aminopeptidase OS=Ochrobactrum anthropi (s...    34   0.61 
sp|Q1MPL7|PNP_LAWIP Polyribonucleotide nucleotidyltransferase OS...    33   0.80 
sp|Q8FV99|DAP_BRUSU D-aminopeptidase OS=Brucella suis GN=dap PE=...    33   0.80 
sp|A9WVV8|DAP_BRUSI D-aminopeptidase OS=Brucella suis (strain AT...    33   0.80 
sp|Q8YD27|DAP_BRUME D-aminopeptidase OS=Brucella melitensis GN=d...    33   0.80 
sp|A9MCM7|DAP_BRUC2 D-aminopeptidase OS=Brucella canis (strain A...    33   0.80 
sp|Q579G4|DAP_BRUAB D-aminopeptidase OS=Brucella abortus GN=dap ...    33   0.80 
sp|Q2YLB4|DAP_BRUA2 D-aminopeptidase OS=Brucella abortus (strain...    33   0.80 
sp|Q9DC26|S46A3_MOUSE Solute carrier family 46 member 3 OS=Mus m...    33   1.0  
sp|Q9HZ71|RS1_PSEAE 30S ribosomal protein S1 OS=Pseudomonas aeru...    33   1.4  
sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria mening...    33   1.4  
sp|A9F8Z2|PNP_SORC5 Polyribonucleotide nucleotidyltransferase OS...    33   1.4  
sp|Q5F267|P5I13_MOUSE Tumor protein p53-inducible protein 13 OS=...    32   1.8  
sp|Q57641|Y182_METJA Uncharacterized protein MJ0182 OS=Methanoca...    32   1.8  
sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 O...    32   2.3  

>sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic
           OS=Spinacia oleracea GN=RPS1 PE=1 SV=1
          Length = 411

 Score =  105 bits (263), Expect = 1e-22
 Identities = 65/163 (39%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
 Frame = +2

Query: 86  VAAVAQRVASTAMKEPLGLSPNSSLGFTCSGLSGHRLF-RAAQNVSRIHCATAAVVPKKK 262
           +A++AQ++A      PL    NS+L    S    H L  R +  VS +  + A    +++
Sbjct: 1   MASLAQQLAGGLRCPPLS---NSNLSKPFS--PKHTLKPRFSPIVSAVAVSNAQT--RER 53

Query: 263 DNLLAVAEQHFLRATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALV 442
             L  + E  + R    P+EG+SF++++F  AL KYDFN E+G  VKGTVF  + NGALV
Sbjct: 54  QKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALV 113

Query: 443 DIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSDD 571
           DI AK+ A+LP +EA I RIK+VEE G+ PG+ ++F ++  ++
Sbjct: 114 DITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENE 156


>sp|P46228|RS1_SYNP6 30S ribosomal protein S1 OS=Synechococcus sp.
           (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA
           PE=1 SV=4
          Length = 307

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 38/90 (42%), Positives = 56/90 (62%)
 Frame = +2

Query: 314 PLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASI 493
           P   + F+ E+F+  L +YD++F  G TV GTVF     GAL+DIGAK  AFLP  E SI
Sbjct: 7   PAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQEMSI 66

Query: 494 LRIKHVEEVGLFPGLEDDFYVMKSDDDHGR 583
            R++  EEV L P    +F+++  +++ G+
Sbjct: 67  NRVESPEEV-LQPSEMREFFILSDENEDGQ 95


>sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A
           OS=Synechocystis sp. (strain PCC 6803) GN=rps1A PE=3
           SV=1
          Length = 328

 Score = 73.2 bits (178), Expect = 9e-13
 Identities = 35/86 (40%), Positives = 55/86 (63%)
 Frame = +2

Query: 326 LSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIK 505
           + F++E+F+  L KYD++F  G  V GTVF   + GAL+DIGAK  A++P  E SI R+ 
Sbjct: 10  IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69

Query: 506 HVEEVGLFPGLEDDFYVMKSDDDHGR 583
             EEV L P    +F+++  +++ G+
Sbjct: 70  DPEEV-LQPNETREFFILTDENEDGQ 94


>sp|P74142|RS1B_SYNY3 30S ribosomal protein S1 homolog B
           OS=Synechocystis sp. (strain PCC 6803) GN=rps1b PE=3
           SV=1
          Length = 305

 Score = 59.7 bits (143), Expect = 1e-08
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
 Frame = +2

Query: 329 SFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKH 508
           +FS++EF++AL K+D++ E GQTV G +    N G  VD G K+P F+P  E  +    H
Sbjct: 9   AFSLDEFAKALDKHDYHAEKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLR--PH 66

Query: 509 VEEVGLFPGLED--DFYVMKSDDDHGR 583
            E    FP L+   DF V    +D G+
Sbjct: 67  AEIEDSFP-LDSAWDFLVTSEQNDEGQ 92


>sp|O33698|RS1_SYNE7 30S ribosomal protein S1 OS=Synechococcus
           elongatus (strain PCC 7942) GN=rpsA PE=3 SV=1
          Length = 295

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 29/83 (34%), Positives = 48/83 (57%)
 Frame = +2

Query: 335 SMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVE 514
           S ++F+ AL     + + GQ V+G V   + +GA +DIG KAPAFLP  EA++  +  + 
Sbjct: 10  SYDDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDL- 68

Query: 515 EVGLFPGLEDDFYVMKSDDDHGR 583
           E  L    E +F V++  ++ G+
Sbjct: 69  EAHLPKDEELEFLVIRDQNEDGQ 91


>sp|P51345|RR1_PORPU 30S ribosomal protein S1, chloroplastic
           OS=Porphyra purpurea GN=rps1 PE=3 SV=1
          Length = 263

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 23/54 (42%), Positives = 30/54 (55%)
 Frame = +2

Query: 329 SFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEAS 490
           SF+   F+  L KY ++  +G  V GT+F    NG LVDIG    A+LP  E S
Sbjct: 7   SFTHRNFAAVLQKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVS 60


>sp|Q1XDE2|RR1_PORYE 30S ribosomal protein S1, chloroplastic
           OS=Porphyra yezoensis GN=rps1 PE=3 SV=2
          Length = 263

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 22/53 (41%), Positives = 29/53 (54%)
 Frame = +2

Query: 332 FSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEAS 490
           F+   F+  L KY ++  +G  V GT+F    NG LVDIG    A+LP  E S
Sbjct: 8   FTHRNFAAVLQKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPISAYLPIQEVS 60


>sp|O06147|RS1_MYCTU 30S ribosomal protein S1 OS=Mycobacterium
           tuberculosis GN=rpsA PE=3 SV=1
          Length = 481

 Score = 39.3 bits (90), Expect = 0.015
 Identities = 27/83 (32%), Positives = 39/83 (46%)
 Frame = +2

Query: 335 SMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVE 514
           S E+F  A+ K    F  G  V+GT+   + +  L+DIG K    +P  E SI       
Sbjct: 18  SSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPN 77

Query: 515 EVGLFPGLEDDFYVMKSDDDHGR 583
           EV +  G E +  V+  +D  GR
Sbjct: 78  EV-VSVGDEVEALVLTKEDKEGR 99



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
 Frame = +2

Query: 284 EQHFLRATENPLEG---LSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGA 454
           E   L  T+   EG   LS    ++ +A    +   E  + VKGTV      G ++DIG 
Sbjct: 85  EVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGTVIEVVKGGLILDIGL 144

Query: 455 KAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSD 568
           +   FLP   AS++ ++ V ++  + G E +  +++ D
Sbjct: 145 R--GFLP---ASLVEMRRVRDLQPYIGKEIEAKIIELD 177


>sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium
           leprae GN=rpsA PE=3 SV=2
          Length = 481

 Score = 39.3 bits (90), Expect = 0.015
 Identities = 27/83 (32%), Positives = 39/83 (46%)
 Frame = +2

Query: 335 SMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVE 514
           S E+F  A+ K    F  G  V+GT+   + +  L+DIG K    +P  E SI       
Sbjct: 18  SSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPN 77

Query: 515 EVGLFPGLEDDFYVMKSDDDHGR 583
           EV +  G E +  V+  +D  GR
Sbjct: 78  EV-VSVGDEVEALVLTKEDKEGR 99


>sp|Q9Z8M3|RS1_CHLPN 30S ribosomal protein S1 OS=Chlamydia
           pneumoniae GN=rpsA PE=3 SV=1
          Length = 580

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 24/86 (27%), Positives = 43/86 (50%)
 Frame = +2

Query: 326 LSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIK 505
           L ++    + +  + D   + G  +KGTV   N +  +VD+G K+   +P SE     I 
Sbjct: 31  LLYTAHRITSSEEESDNEIQPGAILKGTVVDINKDFVVVDVGLKSEGVIPMSEF----ID 86

Query: 506 HVEEVGLFPGLEDDFYVMKSDDDHGR 583
             E  GL  G E + Y+ +++D+ G+
Sbjct: 87  SSE--GLVLGAEVEVYLDQAEDEEGK 110



 Score = 30.8 bits (68), Expect = 5.2
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = +2

Query: 383 EIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMK 562
           E G  VKG +      G +VDIG +  AFLP S+    +IK++++   + G   +F ++K
Sbjct: 132 EEGSIVKGQITRKVKGGLIVDIGME--AFLPGSQIDNKKIKNLDD---YVGKVCEFKILK 186
tr_hit_id A9S0R6
Definition tr|A9S0R6|A9S0R6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 163
Score (bit) 155.0
E-value 1.0e-36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962754|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_L12, 5'
         (583 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S0R6|A9S0R6_PHYPA Predicted protein OS=Physcomitrella paten...   155   1e-36
tr|A9RWH7|A9RWH7_PHYPA Predicted protein OS=Physcomitrella paten...   150   7e-35
tr|A9PE95|A9PE95_POPTR Putative uncharacterized protein OS=Popul...   112   1e-23
tr|A9NYG1|A9NYG1_PICSI Putative uncharacterized protein OS=Picea...   107   6e-22
tr|A7Q8U9|A7Q8U9_VITVI Chromosome chr5 scaffold_64, whole genome...   106   8e-22
tr|Q93VC7|Q93VC7_ARATH Putative uncharacterized protein (Putativ...   102   2e-20
tr|B7FJ43|B7FJ43_MEDTR Putative uncharacterized protein OS=Medic...    94   7e-18
tr|Q7V5A4|Q7V5A4_PROMM 30S ribosomal protein S1, homolog A OS=Pr...    90   8e-17
tr|A2CBU1|A2CBU1_PROM3 30S ribosomal protein S1, protein A OS=Pr...    90   8e-17
tr|B4FUZ5|B4FUZ5_MAIZE 30S ribosomal protein S1 OS=Zea mays PE=2...    89   2e-16
tr|Q05Z68|Q05Z68_9SYNE 30S ribosomal protein S1 OS=Synechococcus...    88   3e-16
tr|Q10MB3|Q10MB3_ORYSJ 30S ribosomal protein S1, chloroplast, pu...    88   3e-16
tr|Q10MB2|Q10MB2_ORYSJ 30S ribosomal protein S1, chloroplast, pu...    88   3e-16
tr|A2XG06|A2XG06_ORYSI Putative uncharacterized protein OS=Oryza...    88   3e-16
tr|Q0DSD6|Q0DSD6_ORYSJ Os03g0315800 protein (Fragment) OS=Oryza ...    88   4e-16
tr|Q3AWE8|Q3AWE8_SYNS9 SSU ribosomal protein S1P OS=Synechococcu...    86   1e-15
tr|B5IPJ0|B5IPJ0_9CHRO Ribosomal protein S1 OS=Cyanobium sp. PCC...    86   1e-15
tr|Q05Q21|Q05Q21_9SYNE 30S ribosomal protein S1 OS=Synechococcus...    86   2e-15
tr|A3YUT0|A3YUT0_9SYNE 30S ribosomal protein S1 OS=Synechococcus...    86   2e-15
tr|B1X539|B1X539_PAUCH 30S ribosomal protein S1 OS=Paulinella ch...    86   2e-15
tr|A3Z943|A3Z943_9SYNE RNA binding S1 OS=Synechococcus sp. RS991...    85   3e-15
tr|Q31CL6|Q31CL6_PROM9 SSU ribosomal protein S1P OS=Prochlorococ...    85   3e-15
tr|A5GJ26|A5GJ26_SYNPW 30S ribosomal protein S1 OS=Synechococcus...    84   6e-15
tr|A4CSD5|A4CSD5_SYNPV 30S ribosomal protein S1 OS=Synechococcus...    84   6e-15
tr|Q3AME0|Q3AME0_SYNSC RNA binding S1 OS=Synechococcus sp. (stra...    84   8e-15
tr|A9BDW8|A9BDW8_PROM4 30S ribosomal protein S1-like protein A O...    83   1e-14
tr|A2C0F6|A2C0F6_PROM1 30S ribosomal protein S1, protein A OS=Pr...    83   1e-14
tr|Q46H55|Q46H55_PROMT SSU ribosomal protein S1P OS=Prochlorococ...    83   1e-14
tr|Q7U4S8|Q7U4S8_SYNPX 30S ribosomal protein S1, homolog A OS=Sy...    82   2e-14
tr|Q1PKI2|Q1PKI2_PROMA 30S ribosomal protein S1 A OS=uncultured ...    82   3e-14

>tr|A9S0R6|A9S0R6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_122522 PE=4 SV=1
          Length = 389

 Score =  155 bits (393), Expect = 1e-36
 Identities = 82/163 (50%), Positives = 113/163 (69%), Gaps = 1/163 (0%)
 Frame = +2

Query: 98  AQRVASTAMKEPLGLSPNSSLGFTCSGLSGHRL-FRAAQNVSRIHCATAAVVPKKKDNLL 274
           AQ VA+ A+   LG S    L  + S L+G +L  + A N SR+ C TA  +PK +  LL
Sbjct: 7   AQSVAAGAL---LGSSKGFGLASSSSRLAGAQLGVKGASNGSRVTCRTAFTIPKSRQGLL 63

Query: 275 AVAEQHFLRATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGA 454
              E+ +  A E+PL G+ F+ EEF++ LSKYDF+FEIG  VKG VF ++ NGAL+DIGA
Sbjct: 64  EEVERRWEAALESPLAGVEFTHEEFAEVLSKYDFSFEIGDMVKGVVFKSDYNGALIDIGA 123

Query: 455 KAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHGR 583
           KAPA+LP +EA I +++ VEEVGL+PG E++F ++K DDD+GR
Sbjct: 124 KAPAYLPMAEACIHKLRSVEEVGLYPGTEEEFVIVKDDDDNGR 166



 Score = 35.4 bits (80), Expect = 2.4
 Identities = 27/68 (39%), Positives = 32/68 (47%)
 Frame = +2

Query: 380 FEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVM 559
           F IG  V GTV      GA +DIG      L  S+ S  R+  VE V L PG +    V+
Sbjct: 267 FGIGSVVVGTVQTVKPYGAFIDIGG-VSGLLHISQISHDRLTSVETV-LSPGDKLKVMVL 324

Query: 560 KSDDDHGR 583
             D D GR
Sbjct: 325 SQDKDRGR 332


>tr|A9RWH7|A9RWH7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_120257 PE=4 SV=1
          Length = 397

 Score =  150 bits (378), Expect = 7e-35
 Identities = 81/167 (48%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
 Frame = +2

Query: 86  VAAVAQRVASTAMKEPLGLS-PNSSLGFTCSGLSGHRLFRAAQNVSRIHCATAAVVPKKK 262
           +AA AQ VA+ A+    G    NS       G+ G        N SR+ C T   +PK +
Sbjct: 1   MAAAAQTVAAGALLGSQGFGLANSRFAGAQFGVKG------VSNGSRLSCRTTYTIPKSR 54

Query: 263 DNLLAVAEQHFLRATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALV 442
             LL  AE+ +  A E+PL G+ F+ +EF+ ALSKYDF+FEIG  VKG VF ++ NGAL+
Sbjct: 55  QGLLEEAEKRWEAALESPLAGVQFTNDEFADALSKYDFSFEIGDMVKGVVFKSDYNGALI 114

Query: 443 DIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHGR 583
           DIGAKAPA+LP  EA I +++ VEEVGL+PG E++F V+K DDD+GR
Sbjct: 115 DIGAKAPAYLPMGEACIHKLRSVEEVGLYPGTEEEFVVIKDDDDNGR 161



 Score = 34.7 bits (78), Expect = 4.0
 Identities = 26/68 (38%), Positives = 32/68 (47%)
 Frame = +2

Query: 380 FEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVM 559
           F IG  V GTV      GA +DIG      L  S+ S  R+  VE V L PG +    ++
Sbjct: 263 FGIGSVVVGTVQTVKPYGAFIDIGG-VSGLLHISQISHDRLTTVETV-LSPGDKLKVMIL 320

Query: 560 KSDDDHGR 583
             D D GR
Sbjct: 321 SQDKDRGR 328


>tr|A9PE95|A9PE95_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 421

 Score =  112 bits (281), Expect = 1e-23
 Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 11/148 (7%)
 Frame = +2

Query: 161 GFTCSGLSGHRLFRAAQNVSRIHCATAAVVP-----------KKKDNLLAVAEQHFLRAT 307
           G  C  +S  RL   A   S+   A   VV            K+++ L  + E+ + R  
Sbjct: 10  GLRCPPISISRLTERAATFSKPKRAANFVVTAKAVAISNAQTKEREKLKQLFEEAYERCR 69

Query: 308 ENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEA 487
             P+EG+SF++E+F  AL  YDFN EIG  VKGTVF+ +NNGALVDI AK+ A+LP  EA
Sbjct: 70  TAPMEGVSFTVEDFHSALDAYDFNSEIGTRVKGTVFMTDNNGALVDITAKSSAYLPVQEA 129

Query: 488 SILRIKHVEEVGLFPGLEDDFYVMKSDD 571
           SI RIK +EE G+ PG+ ++F ++  ++
Sbjct: 130 SIHRIKRLEEAGIVPGMREEFVIIGENE 157


>tr|A9NYG1|A9NYG1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 425

 Score =  107 bits (266), Expect = 6e-22
 Identities = 52/111 (46%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
 Frame = +2

Query: 254 KKKDNLLAVAEQHFLRATENPLEGLSFSMEEFSQALSKYD-FNFEIGQTVKGTVFLANNN 430
           +++++L+   E+   +  ENP+EG+ F +E+FS++L+  D  N EIG TVKG VF  + N
Sbjct: 66  RERESLMEEIEERLRKIRENPMEGVPFDLEQFSESLANNDGVNCEIGSTVKGMVFKTDAN 125

Query: 431 GALVDIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHGR 583
           GA+VDI  K PAFLP  EA I  IK  EE+GL+PG+E+ F V++ DD + R
Sbjct: 126 GAMVDIRDKVPAFLPLVEACIYNIKTPEEIGLYPGIEEHFMVLREDDTNSR 176


>tr|A7Q8U9|A7Q8U9_VITVI Chromosome chr5 scaffold_64, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033192001
           PE=4 SV=1
          Length = 410

 Score =  106 bits (265), Expect = 8e-22
 Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
 Frame = +2

Query: 161 GFTCSGLSGHRLFRA-----AQNVSRIHCATAAVVP----KKKDNLLAVAEQHFLRATEN 313
           G  C  +S  RL +       Q  S +   +A  +     K++  L  + E  + R    
Sbjct: 10  GLRCPPISSSRLSKPFSPKQPQKPSFVRIVSAVAISNAQTKERLKLKEMFEDAYERCRTA 69

Query: 314 PLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASI 493
           P EG+SFS ++F  AL KYDFN EIG  VKGTVF  + NGALVDI AK+ A+LP  EA I
Sbjct: 70  PTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALVDITAKSSAYLPVYEACI 129

Query: 494 LRIKHVEEVGLFPGLEDDFYVMKSDD 571
            +IKHVEE G+ PG+ ++F ++  ++
Sbjct: 130 HKIKHVEEAGIVPGVREEFVIIGENE 155


>tr|Q93VC7|Q93VC7_ARATH Putative uncharacterized protein (Putative
           ribosomal protein S1) OS=Arabidopsis thaliana
           GN=At5g29771 PE=2 SV=1
          Length = 416

 Score =  102 bits (254), Expect = 2e-20
 Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 16/153 (10%)
 Frame = +2

Query: 161 GFTCSGLSGH-RLFRAA-----QNVSRIHCAT--AAVV-----PKKKDNLLAVAEQHFLR 301
           G  CS LS   RL R A     QN S     T  AAV       K++  L  + E  + R
Sbjct: 10  GLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMSSGQTKERLELKKMFEDAYER 69

Query: 302 ATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTS 481
              +P+EG++F++++F+ A+ +YDFN EIG  VKGTVF  + NGALVDI AK+ A+L   
Sbjct: 70  CRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDISAKSSAYLSVE 129

Query: 482 EASILRIKHVEEVGLFPGLEDDFYVM---KSDD 571
           +A I RIKHVEE G+ PG+ ++F ++   +SDD
Sbjct: 130 QACIHRIKHVEEAGIVPGMVEEFVIIGENESDD 162


>tr|B7FJ43|B7FJ43_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 186

 Score = 93.6 bits (231), Expect = 7e-18
 Identities = 39/85 (45%), Positives = 65/85 (76%)
 Frame = +2

Query: 317 LEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASIL 496
           +EG+SF++++F++ L KYD+  EIG  VKGTVF    +GA VDI +K+ A+LP  EAS+ 
Sbjct: 1   MEGVSFTLDQFTETLEKYDYESEIGTKVKGTVFGTETSGAFVDITSKSTAYLPLYEASLY 60

Query: 497 RIKHVEEVGLFPGLEDDFYVMKSDD 571
           +++HVEE G+FPG++++F ++  ++
Sbjct: 61  KLRHVEEAGIFPGVKEEFVIVGQNE 85


>tr|Q7V5A4|Q7V5A4_PROMM 30S ribosomal protein S1, homolog A
           OS=Prochlorococcus marinus (strain MIT 9313) GN=rps1a/
           rpsA1 PE=4 SV=1
          Length = 367

 Score = 90.1 bits (222), Expect = 8e-17
 Identities = 42/95 (44%), Positives = 64/95 (67%)
 Frame = +2

Query: 299 RATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPT 478
           RA +N L G  F+++EF+  LSKYD+NF+ G  V GTVF   + GA++DIGAK  AF+P 
Sbjct: 57  RAAKNDLSGAGFTLDEFASLLSKYDYNFKPGDIVNGTVFALESKGAMIDIGAKTAAFMPL 116

Query: 479 SEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHGR 583
            E SI R++ + +V L PG   +F++M  +++ G+
Sbjct: 117 QEVSINRVEGLSDV-LLPGEIREFFIMSEENEDGQ 150


>tr|A2CBU1|A2CBU1_PROM3 30S ribosomal protein S1, protein A
           OS=Prochlorococcus marinus (strain MIT 9303) GN=rps1a
           PE=4 SV=1
          Length = 367

 Score = 90.1 bits (222), Expect = 8e-17
 Identities = 42/95 (44%), Positives = 64/95 (67%)
 Frame = +2

Query: 299 RATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPT 478
           RA +N L G  F+++EF+  LSKYD+NF+ G  V GTVF   + GA++DIGAK  AF+P 
Sbjct: 57  RAAKNDLSGAGFTLDEFASLLSKYDYNFKPGDIVNGTVFALESKGAMIDIGAKTAAFMPL 116

Query: 479 SEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHGR 583
            E SI R++ + +V L PG   +F++M  +++ G+
Sbjct: 117 QEVSINRVEGLSDV-LLPGEIREFFIMSEENEDGQ 150


>tr|B4FUZ5|B4FUZ5_MAIZE 30S ribosomal protein S1 OS=Zea mays PE=2
           SV=1
          Length = 401

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
 Frame = +2

Query: 161 GFTCSGLSGHRLFRAAQN---VSRIHCATAAVVP--KKKDNLLAVAEQHFLRATENPLEG 325
           G  C  LSG    R A      S + C T A+    ++++ +  V +    R    P+EG
Sbjct: 10  GLPCPPLSGASRRRPAAQRRPPSALVCGTYALTKDERERERMRQVFDDASERCRTAPMEG 69

Query: 326 LSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIK 505
           ++FS ++   A+   D + EIG  +KGTVF+  +NGA +DI +K+ AFLP  EA +L I 
Sbjct: 70  VAFSPDDLDTAVESTDIDTEIGSLIKGTVFMTTSNGAYIDIQSKSTAFLPLDEACLLDID 129

Query: 506 HVEEVGLFPGLEDDFYVM 559
           +VEE G+ PGL ++F ++
Sbjct: 130 NVEEAGIRPGLVEEFMII 147