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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962759
Clone id TST39A01NGRL0014_L17
Library
Length 566
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_L17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGCATCTCAAGCGTCTGCACTACAAGAAATTGCTGATATTGCCGCAGATAATGACTCGAG
GGGTACTTTGTTGTTGGTGGTGCTTTTGCCGGCTATTGGGTGGGTGCTTTTCAACATATT
GAAACCTGCATTGAACCAGTTGGATAAGATGAGATCATCCAAGGCTGTTGTTGGGGGTCT
TGGGCTTGGGGCTATGTCAATGCTACTTGCACCCCACGCCAATGCTACTGAAGAGATTGT
GTCAATAGCGGCGGACAATGATTCGAGGGGTTTATTGCTACTGGTTGTGCTCCTGCCTGC
CATCGGATGGGTGCTCTTTAACATCCTCCAGCCTGCCTTGAAACAGCTCGACAAGATGCG
CTCAGGGAAGTGAGAATCCATGATCTAGACCCAGTGTGGTCATCTCAAGGTTTTGTCTAT
TTATTTGCACAGCAGCAACAACATGCATCTAGGCTGGCCTTTTGAGTTTTTTCACATGCC
CGTGTATGTGTCTGTCACAAAGATGCTGAAAATTGTATCATGTTTTCTGCAGTGTACTTT
ATTTAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P80470
Definition sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, chloroplastic OS=Spinacia oleracea
Align length 126
Score (bit) 102.0
E-value 9.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962759|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_L17, 5'
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, ...   102   9e-22
sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY, ...    94   6e-19
sp|Q7VD03|PSBY_PROMA Photosystem II protein Y OS=Prochlorococcus...    32   1.5  
sp|Q4G385|PSBY_EMIHU Photosystem II protein Y OS=Emiliania huxle...    32   1.5  
sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Ho...    32   1.5  
sp|Q31AA8|PSBY_PROM9 Photosystem II protein Y OS=Prochlorococcus...    31   3.4  
sp|Q9D7N2|KR261_MOUSE Keratin-associated protein 26-1 OS=Mus mus...    31   4.4  
sp|Q3SX22|BSDC1_BOVIN BSD domain-containing protein 1 OS=Bos tau...    31   4.4  
sp|P51206|PSBY_PORPU Photosystem II protein Y OS=Porphyra purpur...    30   5.8  
sp|Q1XDT1|PSBY_PORYE Photosystem II protein Y OS=Porphyra yezoen...    30   7.6  
sp|P59907|PSBY_PROMP Photosystem II protein Y OS=Prochlorococcus...    30   9.9  

>sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY,
           chloroplastic OS=Spinacia oleracea GN=PSBY PE=1 SV=2
          Length = 199

 Score =  102 bits (255), Expect = 9e-22
 Identities = 61/126 (48%), Positives = 77/126 (61%), Gaps = 8/126 (6%)
 Frame = +2

Query: 11  ASALQEIADIAAD---NDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR-----XXXX 166
           A A+Q++ADIAA+   +D+RG  LL+ ++PA+GWVLFNIL+PALNQ++KMR         
Sbjct: 75  AFAVQQLADIAAEAGTSDNRGLALLLPIIPALGWVLFNILQPALNQINKMRNEKKAFIVG 134

Query: 167 XXXXXXXXXXXXXXXPHANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQ 346
                          P A A  E   IA  +D+RG        PAIGWVLFNILQPAL Q
Sbjct: 135 LGLSGLATSGLLLATPEAQAASE--EIARGSDNRGTLLLLVVLPAIGWVLFNILQPALNQ 192

Query: 347 LDKMRS 364
           L+KMRS
Sbjct: 193 LNKMRS 198



 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = +2

Query: 8   QASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR 154
           +A A  E  +IA  +D+RGTLLL+V+LPAIGWVLFNIL+PALNQL+KMR
Sbjct: 151 EAQAASE--EIARGSDNRGTLLLLVVLPAIGWVLFNILQPALNQLNKMR 197



 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
 Frame = +2

Query: 218 ANATEEIVSIAAD---NDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMRSGK 370
           A A +++  IAA+   +D+RG        PA+GWVLFNILQPAL Q++KMR+ K
Sbjct: 75  AFAVQQLADIAAEAGTSDNRGLALLLPIIPALGWVLFNILQPALNQINKMRNEK 128


>sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY,
           chloroplastic OS=Arabidopsis thaliana GN=PSBY PE=2 SV=1
          Length = 189

 Score = 93.6 bits (231), Expect = 6e-19
 Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 8/127 (6%)
 Frame = +2

Query: 11  ASALQEIADIAADN---DSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR-----XXXX 166
           A A+Q+IA +AA N   D+RG  LL+ ++PAI WVL+NIL+PA+NQ++KMR         
Sbjct: 64  ALAIQQIAQLAAANASSDNRGLALLLPIVPAIAWVLYNILQPAINQVNKMRESKGIVVGL 123

Query: 167 XXXXXXXXXXXXXXXPHANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQ 346
                          P A A  E  + AA +DSRG        PA+ WVL+NILQPAL Q
Sbjct: 124 GIGGGLAASGLLTPPPEAYAAAE--AAAASSDSRGQLLLIVVTPALLWVLYNILQPALNQ 181

Query: 347 LDKMRSG 367
           ++KMRSG
Sbjct: 182 INKMRSG 188



 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +2

Query: 8   QASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR 154
           +A A  E A  AA +DSRG LLL+V+ PA+ WVL+NIL+PALNQ++KMR
Sbjct: 140 EAYAAAEAA--AASSDSRGQLLLIVVTPALLWVLYNILQPALNQINKMR 186



 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
 Frame = +2

Query: 218 ANATEEIVSIAADN---DSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMRSGK 370
           A A ++I  +AA N   D+RG        PAI WVL+NILQPA+ Q++KMR  K
Sbjct: 64  ALAIQQIAQLAAANASSDNRGLALLLPIVPAIAWVLYNILQPAINQVNKMRESK 117


>sp|Q7VD03|PSBY_PROMA Photosystem II protein Y OS=Prochlorococcus
           marinus GN=psbY PE=3 SV=1
          Length = 40

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 17/29 (58%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +2

Query: 71  LLVVLLP---AIGWVLFNILKPALNQLDK 148
           LLV+ LP   AIGWV  NI KPA  Q D+
Sbjct: 4   LLVITLPILAAIGWVTLNIQKPAREQWDR 32


>sp|Q4G385|PSBY_EMIHU Photosystem II protein Y OS=Emiliania huxleyi
           GN=psbY PE=3 SV=1
          Length = 35

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = +2

Query: 65  TLLLVVLLP---AIGWVLFNILKPALNQLDKM 151
           T LLVVLLP   A  W LFNI + AL QL +M
Sbjct: 3   TRLLVVLLPVATAAAWALFNIGRLALQQLKRM 34


>sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo
           sapiens GN=SNAP91 PE=1 SV=2
          Length = 907

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -2

Query: 285 TSSNKPLESLSAAIDTISSVALAWGASSIDIAPSPRPPTTALDDLILSNWFNAGFNMLKS 106
           +S+++P  +  AA  + +S  L  G     +APSP P T A ++L+  N F A F    S
Sbjct: 648 SSASEPQPASQAASSSSASADLLAGFGGSFMAPSPSPVTPAQNNLLQPN-FEAAFGTTPS 706

Query: 105 T 103
           T
Sbjct: 707 T 707


>sp|Q31AA8|PSBY_PROM9 Photosystem II protein Y OS=Prochlorococcus
           marinus (strain MIT 9312) GN=psbY PE=3 SV=1
          Length = 37

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 59  RGTLLLVVLLPAIGWVLFNILKPALNQLDK 148
           R  ++   ++ A+ WV+FNI KPA  Q D+
Sbjct: 3   RAIVVFAPIIAAVAWVVFNIQKPAREQWDR 32


>sp|Q9D7N2|KR261_MOUSE Keratin-associated protein 26-1 OS=Mus
           musculus GN=Krtap26-1 PE=2 SV=1
          Length = 215

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 184 AWGYVNATCTPRQCY*RDCVNSGGQ*FEGFIATGCAPACHR 306
           A G+ N+ C+   C  R C  SG      FI+  C PA +R
Sbjct: 76  ASGFENSCCSSTYCVPRHCQGSGYIPASSFISGSCLPASYR 116


>sp|Q3SX22|BSDC1_BOVIN BSD domain-containing protein 1 OS=Bos taurus
           GN=BSDC1 PE=2 SV=1
          Length = 461

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 292 PACHRMGAL*HPPACLETARQDALREVRIHDLD 390
           PAC   G    PPA +ET R++ L ++R+ +L+
Sbjct: 370 PACRPSGPEPRPPARVETLREEILTDLRVFELN 402


>sp|P51206|PSBY_PORPU Photosystem II protein Y OS=Porphyra purpurea
           GN=psbY PE=3 SV=1
          Length = 36

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 53  DSRGTLLLVVLLPAIGWVLFNILKPALNQLDKM 151
           DSR  ++L+ +L A  W ++NI + AL Q  KM
Sbjct: 2   DSRLLIVLIPVLAAASWAVYNIGRVALQQFRKM 34


>sp|Q1XDT1|PSBY_PORYE Photosystem II protein Y OS=Porphyra yezoensis
           GN=psbY PE=3 SV=1
          Length = 36

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 53  DSRGTLLLVVLLPAIGWVLFNILKPALNQLDKM 151
           DSR  ++L+ +L A  W ++NI + AL Q  KM
Sbjct: 2   DSRLLVVLIPVLAAASWAVYNIGRVALQQFRKM 34
tr_hit_id A9SPH7
Definition tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide OS=Physcomitrella patens subsp. patens
Align length 120
Score (bit) 106.0
E-value 9.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962759|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_L17, 5'
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide OS=Physco...   106   9e-22
tr|A9TFS8|A9TFS8_PHYPA Predicted protein (Fragment) OS=Physcomit...   105   1e-21
tr|A9NZQ0|A9NZQ0_PICSI Putative uncharacterized protein OS=Picea...   105   2e-21
tr|A9NQA0|A9NQA0_PICSI Putative uncharacterized protein OS=Picea...   103   6e-21
tr|A9NL05|A9NL05_PICSI Putative uncharacterized protein OS=Picea...   103   6e-21
tr|A9U315|A9U315_PHYPA Predicted protein (Fragment) OS=Physcomit...   101   2e-20
tr|B6SQV2|B6SQV2_MAIZE Photosystem II core complex proteins psbY...   101   3e-20
tr|B6SR26|B6SR26_MAIZE Photosystem II core complex proteins psbY...    98   3e-19
tr|A9PJ80|A9PJ80_POPJC Putative uncharacterized protein OS=Popul...    98   3e-19
tr|Q6ZJ41|Q6ZJ41_ORYSJ cDNA clone:001-024-H10, full insert seque...    95   3e-18
tr|Q0J8C7|Q0J8C7_ORYSJ Os08g0119800 protein (Fragment) OS=Oryza ...    95   3e-18
tr|A9PJJ8|A9PJJ8_POPJC Putative uncharacterized protein OS=Popul...    95   3e-18
tr|A2YQQ7|A2YQQ7_ORYSI Putative uncharacterized protein OS=Oryza...    95   3e-18
tr|A9PIV1|A9PIV1_POPJC Putative uncharacterized protein OS=Popul...    94   4e-18
tr|B6SUJ7|B6SUJ7_MAIZE Photosystem II core complex proteins psbY...    94   5e-18
tr|Q8LAL4|Q8LAL4_ARATH Putative uncharacterized protein OS=Arabi...    94   6e-18
tr|Q549N8|Q549N8_ARATH Putative uncharacterized protein OS=Arabi...    94   6e-18
tr|A9PJP1|A9PJP1_POPJC Putative uncharacterized protein OS=Popul...    93   1e-17
tr|A9PJP0|A9PJP0_POPJC Putative uncharacterized protein OS=Popul...    93   1e-17
tr|B7FLH1|B7FLH1_MEDTR Putative uncharacterized protein OS=Medic...    82   2e-14
tr|A8JKA1|A8JKA1_CHLRE Ycf32-related polyprotein of photosystem ...    61   3e-08
tr|A8I003|A8I003_CHLRE Ycf32-related subunit of photosystem II O...    59   1e-07
tr|Q5K5A8|Q5K5A8_ORYSA PsbY-like protein OS=Oryza sativa GN=MgBP...    59   2e-07
tr|A7P454|A7P454_VITVI Chromosome chr1 scaffold_5, whole genome ...    59   2e-07
tr|A4S5C8|A4S5C8_OSTLU Possible psbY, PSII-Y, photosystem II pol...    55   2e-06
tr|Q00Y99|Q00Y99_OSTTA Manganese-binding protein PsbY, photosyst...    54   7e-06
tr|Q6Z755|Q6Z755_ORYSJ Putative uncharacterized protein P0487D09...    38   0.40 
tr|A3AB43|A3AB43_ORYSJ Putative uncharacterized protein OS=Oryza...    38   0.40 
tr|A2X9C2|A2X9C2_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.40 
tr|Q0UMU6|Q0UMU6_PHANO Putative uncharacterized protein OS=Phaeo...    36   1.2  

>tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_166016 PE=4 SV=1
          Length = 368

 Score =  106 bits (264), Expect = 9e-22
 Identities = 57/120 (47%), Positives = 76/120 (63%)
 Frame = +2

Query: 2   ASQASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMRXXXXXXXXX 181
           +  A A Q+I  +A + D+R   LL+ L+PAIGWVLFNILKPALNQ+DKM+         
Sbjct: 77  SESALASQQIMALA-EGDNRVVALLIPLVPAIGWVLFNILKPALNQVDKMKAAKSLVAGA 135

Query: 182 XXXXXXXXXXPHANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMR 361
                     PHA+A +EI  + AD+D+RG        PA+GWVLFNIL+PAL Q++KM+
Sbjct: 136 GLGALALVAAPHADAAQEIAQV-ADSDARGLIIIGLLLPAVGWVLFNILRPALNQIEKMQ 194



 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 59/138 (42%), Positives = 74/138 (53%), Gaps = 16/138 (11%)
 Frame = +2

Query: 2   ASQASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLD------------ 145
           A  A A QEIA +A D+DSRG +++ +LLPA+GWVLFNILKPALNQ++            
Sbjct: 222 APHADAAQEIATLA-DSDSRGLIIIGLLLPAVGWVLFNILKPALNQINNIVEGNDTGAPV 280

Query: 146 ---KMRXXXXXXXXXXXXXXXXXXXPHANA-TEEIVSIAADNDSRGXXXXXXXXPAIGWV 313
              K                     P A+A  +EI  + A  D+R         PAIGWV
Sbjct: 281 KRGKKFGGMIGATGISAAAMSLLAAPKADAQVQEIAQLGA--DTRPLILLFILAPAIGWV 338

Query: 314 LFNILQPALKQLDKMRSG 367
           LFNIL+PAL Q+DKM  G
Sbjct: 339 LFNILKPALNQVDKMVEG 356



 Score = 50.4 bits (119), Expect = 6e-05
 Identities = 25/51 (49%), Positives = 37/51 (72%)
 Frame = +2

Query: 218 ANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMRSGK 370
           A A+++I+++A + D+R         PAIGWVLFNIL+PAL Q+DKM++ K
Sbjct: 80  ALASQQIMALA-EGDNRVVALLIPLVPAIGWVLFNILKPALNQVDKMKAAK 129


>tr|A9TFS8|A9TFS8_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8237 PE=4 SV=1
          Length = 130

 Score =  105 bits (263), Expect = 1e-21
 Identities = 58/121 (47%), Positives = 76/121 (62%)
 Frame = +2

Query: 2   ASQASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMRXXXXXXXXX 181
           +  A A Q+I  +A + D+R   LL+ L+PAIGWVLFNILKPALNQ+DKMR         
Sbjct: 12  SESALASQQIMALA-EGDNRVVALLIPLVPAIGWVLFNILKPALNQVDKMRSAKALVAGA 70

Query: 182 XXXXXXXXXXPHANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMR 361
                     PHA+A +EI  + A++D+RG        PAIGWVLFNIL+PAL Q +KM+
Sbjct: 71  GLGSLAMLAAPHADAAQEIAQV-AESDARGLIIIGLLLPAIGWVLFNILRPALNQFEKMQ 129

Query: 362 S 364
           +
Sbjct: 130 N 130



 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = +2

Query: 218 ANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMRSGK 370
           A A+++I+++A + D+R         PAIGWVLFNIL+PAL Q+DKMRS K
Sbjct: 15  ALASQQIMALA-EGDNRVVALLIPLVPAIGWVLFNILKPALNQVDKMRSAK 64


>tr|A9NZQ0|A9NZQ0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 207

 Score =  105 bits (262), Expect = 2e-21
 Identities = 61/126 (48%), Positives = 81/126 (64%), Gaps = 6/126 (4%)
 Frame = +2

Query: 11  ASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMRXXXXXXXXXXXX 190
           A+A QE+ ++AA +DSRGTLLL+ L+PAI WVL+NIL+PALNQ+++M+            
Sbjct: 83  AAAAQEVMELAA-SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGA 141

Query: 191 XXXXXXX--PHANATEEIV----SIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLD 352
                    P     E++V    + AA+ND+RG        PAIGWVLFNILQPAL Q++
Sbjct: 142 AGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQIN 201

Query: 353 KMRSGK 370
           KMRSGK
Sbjct: 202 KMRSGK 207


>tr|A9NQA0|A9NQA0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 206

 Score =  103 bits (257), Expect = 6e-21
 Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 6/125 (4%)
 Frame = +2

Query: 11  ASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMRXXXXXXXXXXXX 190
           A+A QE+ ++AA +DSRGTLLL+ L+PAI WVL+NIL+PALNQ+++M+            
Sbjct: 83  AAAAQEVMELAA-SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGA 141

Query: 191 XXXXXXX--PHANATEEIV----SIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLD 352
                    P     E++V    + AA+ND+RG        PAIGWVLFNILQPAL Q++
Sbjct: 142 AGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQIN 201

Query: 353 KMRSG 367
           KMRSG
Sbjct: 202 KMRSG 206


>tr|A9NL05|A9NL05_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 206

 Score =  103 bits (257), Expect = 6e-21
 Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 6/125 (4%)
 Frame = +2

Query: 11  ASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMRXXXXXXXXXXXX 190
           A+A QE+ ++AA +DSRGTLLL+ L+PAI WVL+NIL+PALNQ+++M+            
Sbjct: 83  AAAAQEVMELAA-SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGA 141

Query: 191 XXXXXXX--PHANATEEIV----SIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLD 352
                    P     E++V    + AA+ND+RG        PAIGWVLFNILQPAL Q++
Sbjct: 142 AGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQIN 201

Query: 353 KMRSG 367
           KMRSG
Sbjct: 202 KMRSG 206


>tr|A9U315|A9U315_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_155209 PE=4 SV=1
          Length = 137

 Score =  101 bits (252), Expect = 2e-20
 Identities = 58/122 (47%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   ASQASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR-XXXXXXXX 178
           +  A A Q+I  +A + D+R   LL+ L+PAIGWVLFNIL+PALNQ+DKMR         
Sbjct: 18  SESAMASQQIMALA-EGDNRVVALLIPLIPAIGWVLFNILQPALNQVDKMRGAKALVAGA 76

Query: 179 XXXXXXXXXXXPHANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKM 358
                      PHA+A +E   I AD+D+RG        PAIGWVLFNIL+PAL Q++KM
Sbjct: 77  GLGAAATLMAAPHADAAQEFAQI-ADSDARGLIIVGLLLPAIGWVLFNILRPALNQIEKM 135

Query: 359 RS 364
           ++
Sbjct: 136 QN 137



 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = +2

Query: 218 ANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMRSGK 370
           A A+++I+++A + D+R         PAIGWVLFNILQPAL Q+DKMR  K
Sbjct: 21  AMASQQIMALA-EGDNRVVALLIPLIPAIGWVLFNILQPALNQVDKMRGAK 70


>tr|B6SQV2|B6SQV2_MAIZE Photosystem II core complex proteins psbY
           OS=Zea mays PE=2 SV=1
          Length = 191

 Score =  101 bits (251), Expect = 3e-20
 Identities = 62/129 (48%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
 Frame = +2

Query: 2   ASQASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR---XXXXXX 172
           +S  +AL ++A   A  DSRG LLLVV+ PAIGWVL+NIL+PALNQL++MR         
Sbjct: 62  SSPDAALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGL 121

Query: 173 XXXXXXXXXXXXXPHANA--TEEIVSIAA---DNDSRGXXXXXXXXPAIGWVLFNILQPA 337
                        P A+A   +++ +IAA    +DSRG        PAIGWVLFNILQPA
Sbjct: 122 GLGAAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPA 181

Query: 338 LKQLDKMRS 364
           L QL++MRS
Sbjct: 182 LNQLNRMRS 190



 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 25/49 (51%), Positives = 32/49 (65%)
 Frame = +2

Query: 224 ATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMRSGK 370
           A  ++ +  A  DSRG        PAIGWVL+NILQPAL QL++MRS +
Sbjct: 67  ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQ 115


>tr|B6SR26|B6SR26_MAIZE Photosystem II core complex proteins psbY
           OS=Zea mays PE=2 SV=1
          Length = 176

 Score = 97.8 bits (242), Expect = 3e-19
 Identities = 62/129 (48%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
 Frame = +2

Query: 2   ASQASALQEIADIA-ADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR--XXXXXX 172
           +S  +AL ++   A A  DSRG LLLVV+ PAIGWVL+NIL+PALNQL++MR        
Sbjct: 47  SSPDAALADVVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAG 106

Query: 173 XXXXXXXXXXXXXPHANA--TEEIVSIAA---DNDSRGXXXXXXXXPAIGWVLFNILQPA 337
                        P A+A   +++ +IAA    +DSRG        PAIGWVLFNILQPA
Sbjct: 107 LGLGAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPA 166

Query: 338 LKQLDKMRS 364
           L QL++MRS
Sbjct: 167 LNQLNRMRS 175



 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 26/53 (49%), Positives = 33/53 (62%)
 Frame = +2

Query: 212 PHANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMRSGK 370
           P A   + + +  A  DSRG        PAIGWVL+NILQPAL QL++MRS +
Sbjct: 49  PDAALADVVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQ 101


>tr|A9PJ80|A9PJ80_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 196

 Score = 97.8 bits (242), Expect = 3e-19
 Identities = 57/121 (47%), Positives = 75/121 (61%), Gaps = 3/121 (2%)
 Frame = +2

Query: 11  ASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR---XXXXXXXXX 181
           A A Q+IA+IA + D+RG  LL+ L+PAI WVLFNIL+PALNQ+++MR            
Sbjct: 76  AFAAQQIAEIA-EGDNRGLALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGLGLG 134

Query: 182 XXXXXXXXXXPHANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMR 361
                     PHA+A+E  +   A +D+RG        PAI WVL+NILQPAL Q++KMR
Sbjct: 135 GLAASGFISTPHASASEIAMIADATSDNRGTLLLIVVAPAILWVLYNILQPALNQINKMR 194

Query: 362 S 364
           S
Sbjct: 195 S 195



 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = +2

Query: 5   SQASALQEIADIAADNDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR 154
           + AS +  IAD  +DN  RGTLLL+V+ PAI WVL+NIL+PALNQ++KMR
Sbjct: 147 ASASEIAMIADATSDN--RGTLLLIVVAPAILWVLYNILQPALNQINKMR 194



 Score = 50.1 bits (118), Expect = 8e-05
 Identities = 26/51 (50%), Positives = 33/51 (64%)
 Frame = +2

Query: 218 ANATEEIVSIAADNDSRGXXXXXXXXPAIGWVLFNILQPALKQLDKMRSGK 370
           A A ++I  IA + D+RG        PAI WVLFNILQPAL Q+++MR  K
Sbjct: 76  AFAAQQIAEIA-EGDNRGLALLLPLIPAIAWVLFNILQPALNQINRMRQTK 125


>tr|Q6ZJ41|Q6ZJ41_ORYSJ cDNA clone:001-024-H10, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OJ1005_B05.27 PE=2
           SV=1
          Length = 205

 Score = 94.7 bits (234), Expect = 3e-18
 Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 13/131 (9%)
 Frame = +2

Query: 11  ASALQEIADIAAD----NDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR---XXXXX 169
           A A Q+IAD+AA     +D+RG  LL+ + PAI WVL+NIL+PALNQL++MR        
Sbjct: 74  ALAAQQIADVAAAAAGADDNRGLALLLPIAPAIAWVLYNILQPALNQLNRMRSEQVLVAG 133

Query: 170 XXXXXXXXXXXXXXPHANATEEIVSIAAD------NDSRGXXXXXXXXPAIGWVLFNILQ 331
                         P A+A +E+  +AA+       D+RG        PAI WVL+NILQ
Sbjct: 134 LGLGAAAGAGLAFPPEASAAQEVARLAAEAAAAEGGDNRGLLLLFVVAPAIAWVLYNILQ 193

Query: 332 PALKQLDKMRS 364
           PAL QL++MRS
Sbjct: 194 PALNQLNRMRS 204



 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 6/55 (10%)
 Frame = +2

Query: 8   QASALQEIADIAAD------NDSRGTLLLVVLLPAIGWVLFNILKPALNQLDKMR 154
           +ASA QE+A +AA+       D+RG LLL V+ PAI WVL+NIL+PALNQL++MR
Sbjct: 149 EASAAQEVARLAAEAAAAEGGDNRGLLLLFVVAPAIAWVLYNILQPALNQLNRMR 203