DK962777
Clone id TST39A01NGRL0014_M11
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_M11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGATGAGGCGCGCGCCAGCAGGTGCTGTCCTTGCGAGAAGACGGCTGCACAACAGGTTAT
GGAAGGTGATTGCATTCAAGGGGGTTGCTCTACAGGCTCAGGTGGCGAGGACGTGGCAGC
AAGAGCTTTTTCATGCGTTGTTCTGCTCGTTTAATGCCGCAGGCGGGCTTCTCAAGGTCG
TTGAAGGCGATCGTGCAGGCTGAGGTTATGAGCACTGATTGTGTTGCTCTTCGTGGTTCA
GTACACGTGCTGAATGGAGCACGAGACATGTAATTTCCATGTACTTATTGTAGCCTATAT
GACAGGCCAGAAAGGGCAGAAAAATGCTTTGTAATAGGTTCTTGTTTCGGGTGGTTATCA
TTATATTGTGTCATGGCAGCAAGTATGAGGATTTGTTTTGATGTATGAGCTTTTGAGCTA
CATTATCTAGTGGAAGATTCTTTGTCTGTCCTGCTTTGTACAAGCTTTTGAGCTACATTA
TCTAGTGGAAGATTCTCTCTCTGTTTTGCCTTTGCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6IR37
Definition sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=Mus musculus
Align length 26
Score (bit) 32.3
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962777|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_M11, 5'
(515 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=M... 32 1.3
sp|A4VGD9|TATB_PSEU5 Sec-independent protein translocase protein... 31 3.0

>sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=Mus
musculus GN=Zdhhc24 PE=2 SV=2
Length = 284

Score = 32.3 bits (72), Expect = 1.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2

Query: 310 LACHIGYNKYMEITCLVLHSARVLNH 233
L C +G++ Y CL+LHSA VL H
Sbjct: 127 LGCCVGFHNYRPFLCLLLHSAGVLLH 152


>sp|A4VGD9|TATB_PSEU5 Sec-independent protein translocase protein
tatB homolog OS=Pseudomonas stutzeri (strain A1501)
GN=tatB PE=3 SV=1
Length = 139

Score = 31.2 bits (69), Expect = 3.0
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2

Query: 259 LHSARVLNHEEQHNQCS*PQPARSPSTTLRSPPA 158
LH+ R+L+ E + Q P PA +P+ T SPP+
Sbjct: 63 LHNERILDLEREMKQSIMPPPASNPAATPPSPPS 96


tr_hit_id B6PLH6
Definition tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 60
Score (bit) 36.2
E-value 0.98
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962777|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_M11, 5'
(515 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein OS=Branc... 36 0.98
tr|B6PLA8|B6PLA8_BRAFL Putative uncharacterized protein OS=Branc... 35 1.7
tr|B8P5Z3|B8P5Z3_9APHY Predicted protein OS=Postia placenta Mad-... 33 6.4

>tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_108391 PE=4 SV=1
Length = 1131

Score = 36.2 bits (82), Expect = 0.98
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1

Query: 419 SSKAHTSKQILILAAMTQYNDNHPKQEPITKHFSALSGLSYRLQ*VHGNYMSRAPFSTCT 240
S ++ +Q+ ++A + QY+ HP+ P+ + F LS L NY SRAP T T
Sbjct: 91 SFRSFRLEQVRLVACVCQYSSEHPQALPMDQLFQGLSQLPKTETTDISNYFSRAPEETTT 150


>tr|B6PLA8|B6PLA8_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_116539 PE=4 SV=1
Length = 370

Score = 35.4 bits (80), Expect = 1.7
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = -2

Query: 304 CHIGYNKYMEITCLVLHSARVLNHEEQHNQ------CS*PQPARSPSTTLRSPPAALNEQ 143
C G +K+ E C + S +N + ++N C +P P L SPPA N Q
Sbjct: 106 CDCGNSKFPENKCKLDPSKAPVNTDNKYNHNFHGLYCICDRPYPDPDDEL-SPPAFFNPQ 164

Query: 142 NNA*KSSCCHV 110
NN +CC++
Sbjct: 165 NNTKSYTCCNL 175


>tr|B8P5Z3|B8P5Z3_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_95687 PE=4 SV=1
Length = 785

Score = 33.5 bits (75), Expect = 6.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = -1

Query: 335 ITKHFSALSGLSYRLQ*VHGNYMSRAPFSTCTEPRRATQSVLITSACTIAFNDLEKPACG 156
I++H S L + Q ++ Y++R+P ST EP TQSV +++FN A G
Sbjct: 383 ISQHVSTLRQRDQQQQALYQQYLNRSP-STPPEPSYGTQSVAAVLGGSMSFNSSMNSASG 441

Query: 155 IKRAEQR 135
+ R
Sbjct: 442 LNVGSSR 448