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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962815
Clone id TST39A01NGRL0014_O01
Library
Length 647
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_O01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CAACAACTACCGCTCCAGCGACTACCTCGCCCGACTGTTCCCGCCAGCAATTCTTGGGCG
GGAGGGCTCTCCGAGCAGCGGGCCCCTCTTCTTCCTCCAAGCGCGTCCTCCTTCACCGTT
CGCGCAACCGCCGATAAGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAGCAA
AGTCTAAGCTATCTAGATGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCTTGGGTTTG
ATGGACCCAGAGGGGCCTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATGGAGAAATC
ATCAATGGAAGATATGCAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTTGGC
AAGGCTGGTCTCATCCCTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCA
CCTCTAGGAACCTACAACTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCC
CTCATGGGCTTTGCTGAGCACCGAAGAGCACAGGATTATTATAAGCCTGGATCGATGGGA
AAGCAGTATTTCTTAGGTTTCGAGAAGGGTCTTGGAGGCTCTGGAGATGCCGCCTACCCT
GGCGGTCTCTTCAACTTCCTAGGCTTCGGGAAGGATGAGAAGTCGAT
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 183
Score (bit) 312.0
E-value 8.0e-85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962815|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_O01, 5'
         (647 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   312   8e-85
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   304   3e-82
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   113   1e-24
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   112   2e-24
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   101   4e-21
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   100   5e-21
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    91   7e-18
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    77   6e-14
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    76   1e-13
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    73   1e-12
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    73   1e-12
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    72   2e-12
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    72   2e-12
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    72   2e-12
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    70   7e-12
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    70   9e-12
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    70   1e-11
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    70   1e-11
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    69   2e-11
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    69   2e-11
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...    69   3e-11
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    68   4e-11
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    68   5e-11
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    68   5e-11
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    67   6e-11
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...    67   6e-11
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    67   8e-11
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    67   8e-11
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...    67   8e-11
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...    67   8e-11

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  312 bits (800), Expect = 8e-85
 Identities = 153/183 (83%), Positives = 161/183 (87%), Gaps = 3/183 (1%)
 Frame = +1

Query: 106 SSFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPD 279
           +SF VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP 
Sbjct: 35  ASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPK 94

Query: 280 WLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYT 459
           WL YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YT
Sbjct: 95  WLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYT 154

Query: 460 LFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYPGG-LFNFLGFGKD 636
           LFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG EKGLGGSGD AYPGG LFN LGFGKD
Sbjct: 155 LFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKD 214

Query: 637 EKS 645
           EKS
Sbjct: 215 EKS 217


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  304 bits (778), Expect = 3e-82
 Identities = 154/196 (78%), Positives = 161/196 (82%), Gaps = 7/196 (3%)
 Frame = +1

Query: 79  RAPLLPPSASSFT---VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGL 240
           RA  LP S        VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL
Sbjct: 24  RARSLPSSVGCSRKGLVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL 83

Query: 241 MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP 420
            DPEG GGFIEP WL YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIP
Sbjct: 84  SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIP 143

Query: 421 PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYP 600
           P GTYNYWAD YTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG EKG GGSG+ AYP
Sbjct: 144 PAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYP 203

Query: 601 GG-LFNFLGFGKDEKS 645
           GG  FN LGFGKDEKS
Sbjct: 204 GGPFFNPLGFGKDEKS 219


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  113 bits (282), Expect = 1e-24
 Identities = 75/183 (40%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
 Frame = +1

Query: 88  LLPPSASSFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGG 264
           + P  + S  V A A  P   DR LWF       +LDGSLPGDFGFDPLGL  DPE    
Sbjct: 46  IAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE---- 98

Query: 265 FIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYW 444
                W    E+++ R+AMLGA G   PE L K G++   +   W+        G   Y+
Sbjct: 99  --SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS---WYTA------GEQEYF 147

Query: 445 ADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYPGGL-FNFL 621
            D  TLFV+E+ L+G+AE RR  D  KPG +         K  G   D  YPGGL F+ L
Sbjct: 148 TDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG--TDVGYPGGLWFDPL 205

Query: 622 GFG 630
           G+G
Sbjct: 206 GWG 208



 Score = 33.9 bits (76), Expect = 0.75
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +1

Query: 184 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 339
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  112 bits (280), Expect = 2e-24
 Identities = 78/197 (39%), Positives = 102/197 (51%), Gaps = 4/197 (2%)
 Frame = +1

Query: 52  SWAGG--LSEQRAPLLPPSASSFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGF 225
           S+ GG  L   +    P + S+ TV   AD     DR LWF       +LDGSLPGDFGF
Sbjct: 33  SFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGDFGF 88

Query: 226 DPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWF 402
           DPLGL  DPE         W +  E+++ R+AMLGA G   PE+L K G++   +   W+
Sbjct: 89  DPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS---WY 139

Query: 403 RTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 582
                   G   Y+ D  TLF++E+ L+G+AE RR  D  KPG +         K  G  
Sbjct: 140 TA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG-- 191

Query: 583 GDAAYPGGL-FNFLGFG 630
            D  YPGGL F+ LG+G
Sbjct: 192 TDVGYPGGLWFDPLGWG 208



 Score = 33.9 bits (76), Expect = 0.75
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +1

Query: 184 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 339
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  101 bits (251), Expect = 4e-21
 Identities = 67/173 (38%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
 Frame = +1

Query: 127 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 303
           +A   V+  +  W     S  YL GSLPGD GFDPLGL  DPE    F++       E++
Sbjct: 44  SASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQ------AELV 97

Query: 304 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 483
           NGR+AMLG  G + PE+    G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 98  NGRWAMLGVAGMLLPEVFTSIGII---NVPKWYAA------GKEEYFASSSTLFVIEFIL 148

Query: 484 MGFAEHRRAQDYYKPGSMG-----KQYFLGFEKGLGGSGDAAYPGGLFNFLGF 627
             + E RR QD   PGS+      KQY L        +G+  YPGG+FN L F
Sbjct: 149 SHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PAGEVGYPGGIFNPLNF 194


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  100 bits (250), Expect = 5e-21
 Identities = 67/179 (37%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
 Frame = +1

Query: 127 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 303
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE    F++       E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ------AELV 98

Query: 304 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 483
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 484 MGFAEHRRAQDYYKPGSMG-----KQYFLGFEKGLGGSGDAAYPGGLFNFLGFGKDEKS 645
             + E RR QD   PGS+      KQY L         G+  YPGG+FN L F   +++
Sbjct: 150 FHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PKGEVGYPGGIFNPLNFAPTQEA 201


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 90.5 bits (223), Expect = 7e-18
 Identities = 69/181 (38%), Positives = 93/181 (51%), Gaps = 2/181 (1%)
 Frame = +1

Query: 91  LPPS-ASSFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGG 264
           +PPS A+S + R+T        +  W    QS +YLDGSL GD GFDPL L  DPE    
Sbjct: 11  VPPSPAASGSPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRW 70

Query: 265 FIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYW 444
           F++ D      ++NGR+AMLG  G + PE+L KAGL+    A  W R   +P  G   Y+
Sbjct: 71  FVQAD------VVNGRWAMLGVAGMLIPEVLTKAGLM---NAPEWLR---LP--GKETYF 116

Query: 445 ADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYPGGLFNFLG 624
           A   T   + M+   + E RR QD   PGS+ +     F+       +  YPG +FN L 
Sbjct: 117 ASSSTALRVHMS-STYVEIRRWQDIKNPGSVNQDPI--FKSYSLPPHECGYPGRVFNPLN 173

Query: 625 F 627
           F
Sbjct: 174 F 174


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 77.4 bits (189), Expect = 6e-14
 Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
 Frame = +1

Query: 190 YLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKA 366
           +LDGSLPGDFGFDPLGL  DP     F++  W R  E+I+GR+AML  +G      +G+A
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 367 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 543
                 T + WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P S   
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSV 175

Query: 544 QYFLGF----EKGLGGSGDAAYPGGLF 612
           ++   +    E     +G+  YPGG F
Sbjct: 176 EWATPWSRTAENFSNSTGEQGYPGGKF 202


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
 Frame = +1

Query: 46  SNSWAGGLSEQRAPLLPPSASS---------FTVRATADKPVKVDRQLWFASKQSLSYLD 198
           S+S+  G ++ +A L  P A+          FTV A A K   +       +     +LD
Sbjct: 13  SSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWLD 72

Query: 199 GSLPGDFGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLI 375
           GSLPGD+GFDPLGL  DP     F++  W R  E+I+GR+AM   +G      +G+A   
Sbjct: 73  GSLPGDYGFDPLGLGKDP----AFLK--WYREAELIHGRWAMAAVLGI----FVGQAW-- 120

Query: 376 PQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 552
              + + WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P S   ++ 
Sbjct: 121 ---SGIPWFEAGADPGAIAPFSFG----TLLGTQLILMGWVESKRWVDFFDPDSQSVEWA 173

Query: 553 LGFEKGLGG----SGDAAYPGGLF 612
             + K        +G+  YPGG F
Sbjct: 174 TPWSKTAENFANFTGEQGYPGGKF 197


>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
           chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
          Length = 245

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 71/207 (34%), Positives = 90/207 (43%), Gaps = 9/207 (4%)
 Frame = +1

Query: 43  ASNSWAGGLSEQRAP-LLPPSASS------FTVRATADKPVKVDRQLWFASKQSLSYLDG 201
           AS+S     S    P LL PS+ S      F   AT    V +  + WF  +   ++LDG
Sbjct: 2   ASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAE-WFPGQPRPAHLDG 60

Query: 202 SLPGDFGFDPLGLMD-PEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLI- 375
           S PGDFGFDPLGL   PE    F E       EI + R+AML   G + PE LG    + 
Sbjct: 61  SSPGDFGFDPLGLATVPENFERFKE------SEIYHCRWAMLCVPGVLVPEALGLGNWVK 114

Query: 376 PQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFL 555
            QE A +    G    LG    W +  T+  +E   + FAE +R  +  K     K    
Sbjct: 115 AQEWAAL--PDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTME--KDPEKKK---- 166

Query: 556 GFEKGLGGSGDAAYPGGLFNFLGFGKD 636
                        YPGG F+ LGF KD
Sbjct: 167 -------------YPGGAFDPLGFSKD 180
tr_hit_id A9PE75
Definition tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 196
Score (bit) 318.0
E-value 2.0e-85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962815|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_O01, 5'
         (647 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   318   2e-85
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   317   3e-85
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   316   9e-85
tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   315   1e-84
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   311   2e-83
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   310   4e-83
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   308   1e-82
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   301   3e-80
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   301   3e-80
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   298   2e-79
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   295   2e-78
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   293   5e-78
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   291   3e-77
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   291   3e-77
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   291   3e-77
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   290   5e-77
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   282   1e-74
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   282   1e-74
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   263   7e-69
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   261   2e-68
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   238   2e-61
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   238   2e-61
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   233   7e-60
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   230   6e-59
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   230   6e-59
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr...   228   2e-58
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   224   5e-57
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   224   5e-57
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ...   221   4e-56
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   215   2e-54

>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  318 bits (814), Expect = 2e-85
 Identities = 158/196 (80%), Positives = 167/196 (85%), Gaps = 2/196 (1%)
 Frame = +1

Query: 64  GLSEQRAPLLPPSASSFTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGL 240
           G    ++P +    SSF VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL
Sbjct: 23  GARPTQSPFVSSRKSSFVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGL 82

Query: 241 MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP 420
            DPEG GGFIEP WL YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIP
Sbjct: 83  SDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIP 142

Query: 421 PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYP 600
           P GTY+YWADPYTLFV EMALMGFAEHRR QD+ KPGSMGKQYFLGFEK LGGSG+ AYP
Sbjct: 143 PAGTYSYWADPYTLFVFEMALMGFAEHRRLQDWAKPGSMGKQYFLGFEKYLGGSGEPAYP 202

Query: 601 GG-LFNFLGFGKDEKS 645
           GG LFN LGFGKDEKS
Sbjct: 203 GGPLFNPLGFGKDEKS 218


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  317 bits (813), Expect = 3e-85
 Identities = 158/196 (80%), Positives = 167/196 (85%), Gaps = 2/196 (1%)
 Frame = +1

Query: 64  GLSEQRAPLLPPSASSFTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGL 240
           G    ++P +    SSF VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL
Sbjct: 23  GARPTQSPFVSSRKSSFVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGL 82

Query: 241 MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP 420
            DPEG GGFIEP WL YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIP
Sbjct: 83  SDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIP 142

Query: 421 PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYP 600
           P GTY+YWADPYTLFV EMALMGFAEHRR QD+ KPGSMGKQYFLGFEK LGGSG+ AYP
Sbjct: 143 PAGTYSYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGEPAYP 202

Query: 601 GG-LFNFLGFGKDEKS 645
           GG LFN LGFGKDEKS
Sbjct: 203 GGPLFNPLGFGKDEKS 218


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  316 bits (809), Expect = 9e-85
 Identities = 161/201 (80%), Positives = 172/201 (85%), Gaps = 12/201 (5%)
 Frame = +1

Query: 79  RAPLLPP--------SASSFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGF 225
           +A +LPP        S +SF VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GF
Sbjct: 32  KALILPPYFNQSSESSRTSFAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGF 91

Query: 226 DPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFR 405
           DPLGLMDPEGPGGFIEP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFR
Sbjct: 92  DPLGLMDPEGPGGFIEPGWLAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFR 151

Query: 406 TGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSG 585
           TGVIPP GTY+YWADP+TLFVLEMALMGFAEHRR QDY  PGSM KQYFLGFEK LGGSG
Sbjct: 152 TGVIPPAGTYDYWADPFTLFVLEMALMGFAEHRRLQDYRYPGSMSKQYFLGFEKYLGGSG 211

Query: 586 DAAYPGG-LFNFLGFGKDEKS 645
           + +YPGG LFN LGFGKDEKS
Sbjct: 212 NPSYPGGPLFNPLGFGKDEKS 232


>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  315 bits (808), Expect = 1e-84
 Identities = 161/199 (80%), Positives = 172/199 (86%), Gaps = 10/199 (5%)
 Frame = +1

Query: 79  RAPLLPPSAS------SFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDP 231
           +A +LPP  S      SFTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLPGD+GFDP
Sbjct: 32  KALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLPGDYGFDP 91

Query: 232 LGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTG 411
           LGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WF+TG
Sbjct: 92  LGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFQTG 151

Query: 412 VIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDA 591
           VIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  PGSMGKQYFLG EK LGGSG+ 
Sbjct: 152 VIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYFLGLEKFLGGSGNP 211

Query: 592 AYPGG-LFNFLGFGKDEKS 645
           AYPGG LFN LGFGKDEKS
Sbjct: 212 AYPGGPLFNPLGFGKDEKS 230


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  311 bits (797), Expect = 2e-83
 Identities = 159/210 (75%), Positives = 169/210 (80%), Gaps = 6/210 (2%)
 Frame = +1

Query: 34  TVPASNSWAGGLSEQRAPLLPPSAS---SFTVRATADKPVK--VDRQLWFASKQSLSYLD 198
           ++ A     GG   Q  P    S+S   SF V+A +  PVK   DRQLWFASKQSLSYLD
Sbjct: 10  SMEAGRQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLD 69

Query: 199 GSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIP 378
           GSLPGDFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP
Sbjct: 70  GSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIP 129

Query: 379 QETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 558
            ETA+ WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 130 PETALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG 189

Query: 559 FEKGLGGSGDAAYPGG-LFNFLGFGKDEKS 645
           FEK LGGSGD AYPGG +FN LGFGKDEKS
Sbjct: 190 FEKFLGGSGDPAYPGGPIFNPLGFGKDEKS 219


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  310 bits (795), Expect = 4e-83
 Identities = 158/210 (75%), Positives = 169/210 (80%), Gaps = 6/210 (2%)
 Frame = +1

Query: 34  TVPASNSWAGGLSEQRAPLLPPSAS---SFTVRATADKPVK--VDRQLWFASKQSLSYLD 198
           ++ A     GG   Q  P    S+S   SF V+A +  PVK   DRQLWFASKQSLSYLD
Sbjct: 10  SMEAGRQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLD 69

Query: 199 GSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIP 378
           GSLPGDFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP
Sbjct: 70  GSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIP 129

Query: 379 QETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 558
            ETA+ WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 130 PETALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG 189

Query: 559 FEKGLGGSGDAAYPGG-LFNFLGFGKDEKS 645
           FEK LGGSGD AYPGG +FN LGFGKDE+S
Sbjct: 190 FEKFLGGSGDPAYPGGPIFNPLGFGKDERS 219


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  308 bits (790), Expect = 1e-82
 Identities = 154/192 (80%), Positives = 162/192 (84%), Gaps = 5/192 (2%)
 Frame = +1

Query: 85  PLLPPS--ASSFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPE 252
           PL  PS  +SSF VRA +  PVK   DR LWFASKQSL+YLDGSLPGD+GFDPLGL DPE
Sbjct: 26  PLQSPSRKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGDYGFDPLGLSDPE 85

Query: 253 GPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGT 432
           G GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ WF+TGV PP GT
Sbjct: 86  GTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALPWFKTGVFPPAGT 145

Query: 433 YNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYPGG-L 609
           YNYWADPYTLFV EMALMGFAEHRR QD+  PGSMGKQYFLG EK LGGSGD AYPGG L
Sbjct: 146 YNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDPAYPGGPL 205

Query: 610 FNFLGFGKDEKS 645
           FN LGFGKDEKS
Sbjct: 206 FNPLGFGKDEKS 217


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  301 bits (770), Expect = 3e-80
 Identities = 148/183 (80%), Positives = 156/183 (85%), Gaps = 3/183 (1%)
 Frame = +1

Query: 106 SSFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPD 279
           SSF V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP 
Sbjct: 35  SSFVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPR 94

Query: 280 WLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYT 459
           WL YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YT
Sbjct: 95  WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYT 154

Query: 460 LFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYPGG-LFNFLGFGKD 636
           LFVLEMALMGFAEHRR QD+Y PGSMGKQYFLG EKGL GSG+ AYPGG  FN LGFGKD
Sbjct: 155 LFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKD 214

Query: 637 EKS 645
           EKS
Sbjct: 215 EKS 217


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  301 bits (770), Expect = 3e-80
 Identities = 148/183 (80%), Positives = 156/183 (85%), Gaps = 3/183 (1%)
 Frame = +1

Query: 106 SSFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPD 279
           SSF V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP 
Sbjct: 35  SSFVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPR 94

Query: 280 WLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYT 459
           WL YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YT
Sbjct: 95  WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYT 154

Query: 460 LFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYPGG-LFNFLGFGKD 636
           LFVLEMALMGFAEHRR QD+Y PGSMGKQYFLG EKGL GSG+ AYPGG  FN LGFGKD
Sbjct: 155 LFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKD 214

Query: 637 EKS 645
           EKS
Sbjct: 215 EKS 217


>tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=Lhca3*1 PE=2 SV=1
          Length = 273

 Score =  298 bits (762), Expect = 2e-79
 Identities = 147/183 (80%), Positives = 155/183 (84%), Gaps = 3/183 (1%)
 Frame = +1

Query: 106 SSFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPD 279
           SSF V+A A  PVK   +R LW AS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP 
Sbjct: 35  SSFVVKAAAAPPVKQGANRPLWVASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPR 94

Query: 280 WLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYT 459
           WL YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YT
Sbjct: 95  WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYT 154

Query: 460 LFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGSGDAAYPGG-LFNFLGFGKD 636
           LFVLEMALMGFAEHRR QD+Y PGSMGKQYFLG EKGL GSG+ AYPGG  FN LGFGKD
Sbjct: 155 LFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKD 214

Query: 637 EKS 645
           EKS
Sbjct: 215 EKS 217