DK962836 |
Clone id |
TST39A01NGRL0014_O22 |
Library |
TST39 |
Length |
575 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_O22. 5' end sequence. |
Accession |
DK962836 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL151Contig1 |
Sequence |
ATCGCTAGGGTTTACGAGCCTGTGCGTTTGTTCTTATTGCTGCTGCTGCTAACGAGCACT CCATCCAGCAGAGAAGATGGCGGAAGCAGTGCCCCTCCCTTCCGGTCAGCCTGAAGTGAA GCTCTTTGGCCGCTGGACCTTCGATGACGTCGAGATCAATGACATCTCGCTGGCTGACTA TATCGCTGTCTCGGTGCACAAACATGCCACCTTTGTGCCTCATACCGCTGGGAGATATTC GGTGAAACGTTTCAGAAAGGCCCAGTGCCCCATTGTGGAGAGATTGACCAACTCTCTCAT GATGCATGGCCGAAACAATGGAAAGAAGCTAATGGCAGTGCGGATTGTTAAGCACGCCAT GGAGATTATTCACTTGTTGACTGATCAAAATCCAATTCAAGTTATTGTTGATGCAGTTAT CAACAGTGGTCCTCGGGAGGATGCCACTCGTATTGGATCGGCTGGTGTTGTTAGAAGACA GGCTGTCGATATCTCTCCTCTTAGGAGAGTAAACCAGGCTATCTATCTCCTCACTACTGG TGCTCGAGAGAGTGCTTTCAGAAATATCAAGACTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O65731 |
Definition |
sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum |
Align length |
156 |
Score (bit) |
281.0 |
E-value |
1.0e-75 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RHY5 |
Definition |
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
156 |
Score (bit) |
303.0 |
E-value |
3.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962836|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_O22, 5' (575 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella paten... 303 3e-81 tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea... 296 5e-79 tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 285 1e-75 tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expre... 284 3e-75 tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza... 284 3e-75 tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome... 283 5e-75 tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome... 282 1e-74 tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Popul... 278 1e-73 tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert seque... 277 3e-73 tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza... 277 3e-73 tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 275 2e-72 tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea m... 275 2e-72 tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 274 2e-72 tr|B3TLU9|B3TLU9_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 274 2e-72 tr|B7FMH6|B7FMH6_MEDTR Putative uncharacterized protein (Fragmen... 273 6e-72 tr|A4RZJ5|A4RZJ5_OSTLU Ribosomal protein S5, component of cytoso... 273 6e-72 tr|B6UGL6|B6UGL6_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 272 8e-72 tr|B7FGS4|B7FGS4_MEDTR Putative uncharacterized protein OS=Medic... 271 1e-71 tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annu... 270 3e-71 tr|A8J2I5|A8J2I5_CHLRE Ribosomal protein S5 OS=Chlamydomonas rei... 266 6e-70 tr|Q7SYU3|Q7SYU3_XENLA MGC64490 protein OS=Xenopus laevis GN=rps... 261 3e-68 tr|Q28EJ8|Q28EJ8_XENTR Ribosomal protein S5 OS=Xenopus tropicali... 258 2e-67 tr|Q0P475|Q0P475_DANRE Zgc:153322 OS=Danio rerio GN=zgc:153322 P... 258 2e-67 tr|B3TGB5|B3TGB5_9NEOP Ribosomal protein S5 (Fragment) OS=Lethe ... 256 6e-67 tr|Q90YR9|Q90YR9_ICTPU 40S ribosomal protein S5 OS=Ictalurus pun... 255 1e-66 tr|Q6Y214|Q6Y214_PAGMA 40S ribosomal protein S5 (Fragment) OS=Pa... 255 1e-66 tr|A2Q0S0|A2Q0S0_SOLSE Ribosomal protein S5 OS=Solea senegalensi... 255 1e-66 tr|Q91V55|Q91V55_MOUSE Putative uncharacterized protein OS=Mus m... 255 1e-66 tr|B0BN81|B0BN81_RAT Rps5 protein (Ribosomal protein S5, isoform... 255 1e-66 tr|Q4KTD7|Q4KTD7_SUBDO S5 OS=Suberites domuncula PE=2 SV=1 255 1e-66
>tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106946 PE=3 SV=1 Length = 196
Score = 303 bits (777), Expect = 3e-81 Identities = 151/156 (96%), Positives = 155/156 (99%) Frame = +2
Query: 107 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 286 QPEVKLFGRW+FDD+EINDISLADYIAVSV KHATFVPHTAGRYSVKRFRKAQCPIVERL Sbjct: 5 QPEVKLFGRWSFDDIEINDISLADYIAVSVDKHATFVPHTAGRYSVKRFRKAQCPIVERL 64
Query: 287 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 466 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDATRIGSAG Sbjct: 65 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDATRIGSAG 124
Query: 467 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 V+RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT Sbjct: 125 VIRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 160
>tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 198
Score = 296 bits (758), Expect = 5e-79 Identities = 150/163 (92%), Positives = 155/163 (95%) Frame = +2
Query: 86 AVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQ 265 A LP QPEVKLF RWTF+DVE+ND+SLADYIAV KHATFVPHTAGRYSVKRFRKAQ Sbjct: 2 AATLP--QPEVKLFNRWTFEDVEVNDLSLADYIAVQSQKHATFVPHTAGRYSVKRFRKAQ 59
Query: 266 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDA 445 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDA Sbjct: 60 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDA 119
Query: 446 TRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 TRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGARESAFRNIKT Sbjct: 120 TRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGARESAFRNIKT 162
>tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 195
Score = 285 bits (729), Expect = 1e-75 Identities = 142/156 (91%), Positives = 151/156 (96%) Frame = +2
Query: 107 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 286 Q EVKLF RW+F++VE++DISLADYIAVS KHAT++PHTAGRY+VKRFRKAQCPIVERL Sbjct: 4 QQEVKLFNRWSFEEVEVSDISLADYIAVSPAKHATYLPHTAGRYAVKRFRKAQCPIVERL 63
Query: 287 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 466 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 64 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 123
Query: 467 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT Sbjct: 124 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 159
>tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0482000 PE=2 SV=1 Length = 199
Score = 284 bits (726), Expect = 3e-75 Identities = 145/166 (87%), Positives = 155/166 (93%) Frame = +2
Query: 77 MAEAVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFR 256 MAE V LP Q EVKLF RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRFR Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 257 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 436 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 437 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 163
>tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36106 PE=3 SV=1 Length = 199
Score = 284 bits (726), Expect = 3e-75 Identities = 145/166 (87%), Positives = 155/166 (93%) Frame = +2
Query: 77 MAEAVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFR 256 MAE V LP Q EVKLF RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRFR Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 257 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 436 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 437 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 163
>tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026702001 PE=3 SV=1 Length = 204
Score = 283 bits (724), Expect = 5e-75 Identities = 141/154 (91%), Positives = 149/154 (96%) Frame = +2
Query: 113 EVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 292 EVKLF RW+FD+V+I D+SL DY+AV+ KHAT+VPHTAGRYSVKRFRKAQCPIVERLTN Sbjct: 15 EVKLFNRWSFDEVQIGDMSLLDYVAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 74
Query: 293 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 472 SLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV Sbjct: 75 SLMMHGRNNGKKLMAVRIMKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 134
Query: 473 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT Sbjct: 135 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 168
>tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025458001 PE=3 SV=1 Length = 208
Score = 282 bits (721), Expect = 1e-74 Identities = 140/153 (91%), Positives = 149/153 (97%) Frame = +2
Query: 116 VKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERLTNS 295 VKLF RW+FD+V+I+DISL DYIAV+ KHAT+VPHTAGRYSVKRFRKAQCPIVERLTNS Sbjct: 20 VKLFNRWSFDEVQISDISLEDYIAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 79
Query: 296 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 475 LMMHGRNNGKKLMAVRI+KHAMEIIHLLT+QNPIQVIVDAVINSGPREDATRIGSAGVVR Sbjct: 80 LMMHGRNNGKKLMAVRIIKHAMEIIHLLTEQNPIQVIVDAVINSGPREDATRIGSAGVVR 139
Query: 476 RQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 RQAVDISPLRR+NQAIYLLTTGARESAFRNIKT Sbjct: 140 RQAVDISPLRRINQAIYLLTTGARESAFRNIKT 172
>tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 207
Score = 278 bits (712), Expect = 1e-73 Identities = 143/172 (83%), Positives = 152/172 (88%), Gaps = 6/172 (3%) Frame = +2
Query: 77 MAEAVPLPSGQP------EVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRY 238 MAEAV P +VKLF RW+FDD+ +NDISLADY+ V V KHAT+VPHTAGRY Sbjct: 1 MAEAVVAPPNPEANQAIYDVKLFNRWSFDDINVNDISLADYVGVQV-KHATYVPHTAGRY 59
Query: 239 SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAV 418 SVKRFRKAQCPIVERLTNSL MHGRNNGKKL AV IVKHAMEIIHLLTDQNPIQVIVDAV Sbjct: 60 SVKRFRKAQCPIVERLTNSLQMHGRNNGKKLKAVTIVKHAMEIIHLLTDQNPIQVIVDAV 119
Query: 419 INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 +NSGPREDATRIGSAGVVRRQAVDISPLRRVNQA+YLLTTGARE+AFRNIKT Sbjct: 120 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGAREAAFRNIKT 171
>tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert sequence OS=Oryza sativa subsp. japonica GN=P0672D08.6 PE=2 SV=1 Length = 200
Score = 277 bits (709), Expect = 3e-73 Identities = 137/156 (87%), Positives = 147/156 (94%) Frame = +2
Query: 107 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 286 Q VKLF W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRFRKAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 287 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 466 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 467 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 164
>tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00008 PE=3 SV=1 Length = 200
Score = 277 bits (709), Expect = 3e-73 Identities = 137/156 (87%), Positives = 147/156 (94%) Frame = +2
Query: 107 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 286 Q VKLF W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRFRKAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 287 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 466 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 467 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 574 VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKT 164
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