DK962864
Clone id TST39A01NGRL0015_A02
Library
Length 656
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_A02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAATCAGGCGAGGAAGAGGAAGCAAATCGAGGCAATGGCCACAGCTACTTCTGCATTGAG
TAGCTCTACCTTTGCAGGGCAGACCGCTCTGAAGCCTCAGAACGAGCTGTCCAAGAGGGT
GGGCAATGTGGAGGCTCGGGTGAGCATGAGGAGGACCGTGAAGAGCACTCCAGAGAGCAT
CTGGTATGGTCCAGATCGCCCTAAGTACCTGGGCCCCTTCTCCGAGGCCACTCCCTCTTA
CCTGACCGGTGAGTTCCCCGGTGATTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCC
CGAGACCTTCGCGAAGAACCGCGAGCTGGAGGTCATTCATGCCAGGTGGGCAATGTTGGG
CGCCCTCGGGTGTGTGACCCCTGAGCTGTTGGCTAAGAACGGCGTGAAGTTTGGTGAGGC
AGTGTGGTTCAAGGCTGGCTCTCAAATCTTCGCTGACGGAGGGTTGGACTACTTGGGCAA
CCCCAGCTTGGTGCACGCTCAGAGCATTTTGGCCATCTGGGCATGTCAGGTTGTGCTGAT
GGGCGCTGTTGAGGGTTACAGAGTTGGCGGCGGCCCCCTCGGCGAGGGCCTGGACCCCAT
CTACCCCGGTGGTTCCTTCGACCCCCTTGGCCTTGCTGATGATCCTGACTCCTTCG
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 195
Score (bit) 369.0
E-value 1.0e-101
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962864|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_A02, 5'
(656 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 369 e-101
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 358 1e-98
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 352 1e-96
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 351 2e-96
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 351 2e-96
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 350 3e-96
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop... 350 5e-96
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 348 1e-95
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 343 5e-94
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 343 5e-94
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 341 2e-93
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 336 7e-92
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 328 1e-89
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 319 7e-87
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 318 1e-86
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 318 2e-86
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 316 6e-86
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 315 1e-85
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 315 2e-85
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 315 2e-85
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 314 2e-85
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 314 2e-85
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 314 3e-85
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 313 4e-85
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 313 4e-85
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 313 7e-85
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 313 7e-85
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 312 9e-85
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 312 1e-84
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 312 1e-84

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
(Fragment) OS=Silene pratensis PE=2 SV=2
Length = 205

Score = 369 bits (946), Expect = e-101
Identities = 173/195 (88%), Positives = 183/195 (93%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
FAGQT LKPQNEL ++VG RVSMRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAGSQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPG 190

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLA+DP++F
Sbjct: 191 GAFDPLGLAEDPEAF 205


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
Length = 265

Score = 358 bits (919), Expect = 1e-98
Identities = 170/196 (86%), Positives = 181/196 (92%), Gaps = 1/196 (0%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 247
FAGQTALK NEL ++G V RVSMRRTVKS P SIWYGPDRPKYLGPFS+ PSYLT
Sbjct: 11 FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 248 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 427
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 428 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 607
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDPIYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYP 190

Query: 608 GGSFDPLGLADDPDSF 655
GG+FDPLGLADDPD+F
Sbjct: 191 GGAFDPLGLADDPDAF 206


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
I, chloroplastic OS=Lemna gibba PE=3 SV=1
Length = 264

Score = 352 bits (902), Expect = 1e-96
Identities = 162/195 (83%), Positives = 183/195 (93%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
FAGQTALK ++EL ++VG + R SMRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTG
Sbjct: 11 FAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTG 70

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWF 130

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPG 190

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLADDP++F
Sbjct: 191 GAFDPLGLADDPEAF 205


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
Length = 265

Score = 351 bits (901), Expect = 2e-96
Identities = 165/196 (84%), Positives = 179/196 (91%), Gaps = 1/196 (0%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 247
F GQ K QNE ++VGN E R++MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 248 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 427
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 428 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 607
FKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 608 GGSFDPLGLADDPDSF 655
GG+FDPLGLADDP++F
Sbjct: 191 GGAFDPLGLADDPEAF 206


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
Length = 265

Score = 351 bits (900), Expect = 2e-96
Identities = 163/196 (83%), Positives = 181/196 (92%), Gaps = 1/196 (0%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 247
FAGQTALK QNEL +++G+ R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 248 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 427
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 428 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 607
FKAGSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYP 190

Query: 608 GGSFDPLGLADDPDSF 655
GG+FDPLGLADDP++F
Sbjct: 191 GGAFDPLGLADDPEAF 206


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
chloroplastic OS=Pinus thunbergii PE=2 SV=1
Length = 266

Score = 350 bits (899), Expect = 3e-96
Identities = 162/194 (83%), Positives = 180/194 (92%), Gaps = 1/194 (0%)
Frame = +2

Query: 74 AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
AGQT L+PQ NEL K+VG +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13 AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWF
Sbjct: 73 EFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWF 132

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAG+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ PG
Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPG 192

Query: 611 GSFDPLGLADDPDS 652
G+FDPLGLADDP++
Sbjct: 193 GAFDPLGLADDPEA 206


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
Length = 265

Score = 350 bits (897), Expect = 5e-96
Identities = 165/196 (84%), Positives = 178/196 (90%), Gaps = 1/196 (0%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 247
F G+T L+ NE ++ GN +AR +MRRTVKS PESIWYGPDRPKYLGPFSE PSYLT
Sbjct: 11 FTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLT 70

Query: 248 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 427
GEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGC PELL KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130

Query: 428 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 607
FKAGSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYP 190

Query: 608 GGSFDPLGLADDPDSF 655
GG+FDPLGLADDPDSF
Sbjct: 191 GGAFDPLGLADDPDSF 206


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
Length = 265

Score = 348 bits (894), Expect = 1e-95
Identities = 164/196 (83%), Positives = 180/196 (91%), Gaps = 1/196 (0%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 247
FAGQTALK QNEL +++G+ R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 248 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 427
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 130

Query: 428 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 607
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 608 GGSFDPLGLADDPDSF 655
GG+FDPLGLADDP++F
Sbjct: 191 GGAFDPLGLADDPEAF 206


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263

Score = 343 bits (880), Expect = 5e-94
Identities = 158/186 (84%), Positives = 176/186 (94%)
Frame = +2

Query: 98 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 277
++EL +RVG+ R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19 RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 278 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 457
TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79 TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 458 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFDPLGLA 637
GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198

Query: 638 DDPDSF 655
DDPD+F
Sbjct: 199 DDPDTF 204



Score = 30.8 bits (68), Expect = 6.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2

Query: 212 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 391
GP E L +PG +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 392 AKNG 403
G
Sbjct: 232 TGKG 235


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263

Score = 343 bits (880), Expect = 5e-94
Identities = 158/186 (84%), Positives = 176/186 (94%)
Frame = +2

Query: 98 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 277
++EL +RVG+ R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19 RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 278 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 457
TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79 TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 458 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFDPLGLA 637
GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198

Query: 638 DDPDSF 655
DDPD+F
Sbjct: 199 DDPDTF 204



Score = 30.8 bits (68), Expect = 6.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2

Query: 212 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 391
GP E L +PG +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 392 AKNG 403
G
Sbjct: 232 TGKG 235


tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 195
Score (bit) 364.0
E-value 2.0e-99
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962864|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_A02, 5'
(656 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ... 364 2e-99
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu... 363 6e-99
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos... 361 2e-98
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ... 360 3e-98
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote... 360 4e-98
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran... 360 5e-98
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v... 358 2e-97
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ... 358 2e-97
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea... 358 2e-97
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea... 357 3e-97
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea... 357 3e-97
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ... 357 4e-97
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ... 357 5e-97
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b... 356 6e-97
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul... 355 1e-96
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul... 355 1e-96
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea... 355 1e-96
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea... 355 1e-96
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea... 355 1e-96
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti... 355 2e-96
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=... 354 3e-96
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=... 354 3e-96
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ... 354 3e-96
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 353 5e-96
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea... 352 9e-96
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O... 351 2e-95
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ... 350 3e-95
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 350 3e-95
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 349 7e-95
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti... 348 1e-94

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
thunbergii GN=cab PE=4 SV=1
Length = 266

Score = 364 bits (935), Expect = 2e-99
Identities = 168/195 (86%), Positives = 185/195 (94%), Gaps = 1/195 (0%)
Frame = +2

Query: 74 AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
AGQT L+PQ NEL K+VG +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13 AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWF
Sbjct: 73 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWF 132

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLADDP++F
Sbjct: 193 GAFDPLGLADDPEAF 207


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
Length = 264

Score = 363 bits (931), Expect = 6e-99
Identities = 170/195 (87%), Positives = 181/195 (92%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
FAGQTALK QNEL +RVG+ R MRRT STP+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FAGQTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWF 130

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPG 190

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLADDPD+F
Sbjct: 191 GAFDPLGLADDPDAF 205


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
chr12 scaffold_47, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
Length = 265

Score = 361 bits (926), Expect = 2e-98
Identities = 170/196 (86%), Positives = 184/196 (93%), Gaps = 1/196 (0%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 247
FAGQTALK NEL ++VG + R++MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 248 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 427
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 428 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 607
FKAG+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 190

Query: 608 GGSFDPLGLADDPDSF 655
GG+FDPLGLADDPD+F
Sbjct: 191 GGAFDPLGLADDPDAF 206


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
ginseng GN=cab PE=2 SV=1
Length = 265

Score = 360 bits (925), Expect = 3e-98
Identities = 169/196 (86%), Positives = 186/196 (94%), Gaps = 1/196 (0%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 247
FAGQTALKPQNEL +++G++ R++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 248 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 427
GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVW 130

Query: 428 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 607
FKAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 608 GGSFDPLGLADDPDSF 655
GGSFDPLGLADDP++F
Sbjct: 191 GGSFDPLGLADDPEAF 206


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
OS=Pachysandra terminalis PE=2 SV=1
Length = 264

Score = 360 bits (924), Expect = 4e-98
Identities = 167/194 (86%), Positives = 182/194 (93%)
Frame = +2

Query: 74 AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 253
AG+TALK QNEL K+VG R+SM RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12 AGRTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 254 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 433
FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 131

Query: 434 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGG 613
AG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPGG
Sbjct: 132 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGG 191

Query: 614 SFDPLGLADDPDSF 655
+FDPLGLADDP++F
Sbjct: 192 AFDPLGLADDPEAF 205


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
Length = 264

Score = 360 bits (923), Expect = 5e-98
Identities = 167/195 (85%), Positives = 180/195 (92%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
F GQT LK QNEL ++VG R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FVGQTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAGSQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPG 190

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLADDPD+F
Sbjct: 191 GAFDPLGLADDPDAF 205


>tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta
vulgaris subsp. vulgaris PE=2 SV=1
Length = 264

Score = 358 bits (918), Expect = 2e-97
Identities = 166/195 (85%), Positives = 180/195 (92%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
FAGQT LKPQNEL ++ G R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FAGQTILKPQNELVRKFGGNGGRASMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAGSQIF +GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLD +YPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDKLYPG 190

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLADDP++F
Sbjct: 191 GAFDPLGLADDPEAF 205


>tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII
type I OS=Lilium longiflorum PE=2 SV=1
Length = 264

Score = 358 bits (918), Expect = 2e-97
Identities = 167/195 (85%), Positives = 183/195 (93%)
Frame = +2

Query: 71 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
F GQTALK ++EL ++VG V RVSMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTG
Sbjct: 11 FTGQTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPFSEQTPSYLTG 70

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL+KNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKNGVKFGEAVWF 130

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPG 190

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLADDPD+F
Sbjct: 191 GAFDPLGLADDPDAF 205


>tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 266

Score = 358 bits (918), Expect = 2e-97
Identities = 167/195 (85%), Positives = 184/195 (94%), Gaps = 1/195 (0%)
Frame = +2

Query: 74 AGQTALKP-QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
AGQT L+P QNEL K+VG +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13 AGQTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTG 72

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLAK GVKFGEAVWF
Sbjct: 73 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWF 132

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAG+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLADDP++F
Sbjct: 193 GAFDPLGLADDPEAF 207


>tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 266

Score = 357 bits (917), Expect = 3e-97
Identities = 167/195 (85%), Positives = 183/195 (93%), Gaps = 1/195 (0%)
Frame = +2

Query: 74 AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 250
AGQT L+PQ NEL ++VG +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13 AGQTLLRPQHNELVRKVGMSQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTG 72

Query: 251 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 430
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAK GVKFGEAVWF
Sbjct: 73 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWF 132

Query: 431 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 610
KAG+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 611 GSFDPLGLADDPDSF 655
G+FDPLGLADDP+SF
Sbjct: 193 GAFDPLGLADDPESF 207