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NBDC - LSDB Archive
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DK962886
Clone id TST39A01NGRL0015_A24
Library
Length 620
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_A24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CCATAAACGTGTTATAGATGGCTTGGAAAGTGAAATAGATGGTTCTGCCATGCGGACAGG
ATTAGTCTCAACAAAACTTTTGGTTCCGGTGACTCAGGCTGGCAGCCTAATTGGGCGACA
GGGCACAACTATCAAGTCTATCCAGGATGATTCTGGTGCAATCGTGCGAGTAATCTCTTC
AGAAGAACCACCTATTTGTGGACTTCAAGATGATAGAGTTGTGGAAATTCAAGGTGAGGG
GCCAAAGGTTCAAAAAGCAATGGAACTGGTGGTGTCTCATTTGCGGAAGTTTTTGGTTGA
CCGCTCCATATTGCCTTTATTTGAAAGGGCCGTTCAATCTCAAGGCCAACAATCGCTGCC
TCAGGGAGCATGGGGTCATAGTTCTGCAGCTTCTCTTCATGGTTCTTCAGGAGGGGGACT
AGGTGGCACATCTCATTATGGGCTGCCAGGTTCTGGGGTTTCTGGTTTGGGTGGCACATC
TCACTATGGAGCCCCAAGTTCAGCTGGACCAGGATTGAGTGGTGCATCCCATTATTCCAC
TCCGTCATTCCAACATGAGAGCTATTACCCACCTGCAGATAACTTTGACTCACAAAGTCA
CCACCATGGAGTTTCAATAT
■■Homology search results ■■ -
sp_hit_id Q80WA4
Definition sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus
Align length 72
Score (bit) 52.4
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962886|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_A24, 5'
         (620 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rat...    52   2e-06
sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus...    52   2e-06
sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fasci...    52   2e-06
sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens...    52   2e-06
sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens...    51   4e-06
sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=...    50   9e-06
sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS...    47   6e-05
sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K ...    47   6e-05
sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K ...    47   6e-05
sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K ...    47   6e-05
sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K ...    47   6e-05
sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K ...    47   6e-05
sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K ...    47   6e-05
sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K ...    47   6e-05
sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus ...    46   2e-04
sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus...    46   2e-04
sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens...    46   2e-04
sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus G...    46   2e-04
sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=...    46   2e-04
sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Ra...    44   9e-04
sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=...    44   9e-04
sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=...    44   9e-04
sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus...    43   0.001
sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens...    43   0.001
sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus...    42   0.003
sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens...    41   0.004
sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus G...    41   0.004
sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus...    41   0.006
sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens...    41   0.006
sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Ra...    40   0.007

>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus
           norvegicus GN=Nova1 PE=2 SV=1
          Length = 474

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 28/72 (38%), Positives = 50/72 (69%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGPKVQ 253
           K++VP + AG +IG+ G T+K+I + SGA V++  S++P    LQ +RVV + GE  + +
Sbjct: 150 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQ-ERVVTVSGEPEQNR 206

Query: 254 KAMELVVSHLRK 289
           KA+EL++  +++
Sbjct: 207 KAVELIIQKIQE 218



 Score = 37.4 bits (85), Expect = 0.063
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
 Frame = +2

Query: 41  GSAMRT-----GLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEE 187
           GS  RT     G    K+L+P   AGS+IG+ G TI  +Q ++GA +++  S++
Sbjct: 36  GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 89


>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus
           GN=Nova1 PE=1 SV=2
          Length = 507

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 28/72 (38%), Positives = 50/72 (69%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGPKVQ 253
           K++VP + AG +IG+ G T+K+I + SGA V++  S++P    LQ +RVV + GE  + +
Sbjct: 175 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQ-ERVVTVSGEPEQNR 231

Query: 254 KAMELVVSHLRK 289
           KA+EL++  +++
Sbjct: 232 KAVELIIQKIQE 243



 Score = 37.4 bits (85), Expect = 0.063
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
 Frame = +2

Query: 41  GSAMRT-----GLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEE 187
           GS  RT     G    K+L+P   AGS+IG+ G TI  +Q ++GA +++  S++
Sbjct: 37  GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90


>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca
           fascicularis GN=NOVA1 PE=2 SV=1
          Length = 483

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 28/72 (38%), Positives = 50/72 (69%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGPKVQ 253
           K++VP + AG +IG+ G T+K+I + SGA V++  S++P    LQ +RVV + GE  + +
Sbjct: 151 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQ-ERVVTVSGEPEQNR 207

Query: 254 KAMELVVSHLRK 289
           KA+EL++  +++
Sbjct: 208 KAVELIIQKIQE 219



 Score = 37.4 bits (85), Expect = 0.063
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
 Frame = +2

Query: 41  GSAMRT-----GLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEE 187
           GS  RT     G    K+L+P   AGS+IG+ G TI  +Q ++GA +++  S++
Sbjct: 37  GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90


>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens
           GN=NOVA1 PE=1 SV=1
          Length = 510

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 27/72 (37%), Positives = 50/72 (69%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGPKVQ 253
           K++VP + AG +IG+ G T+K++ + SGA V++  S++P    LQ +RVV + GE  + +
Sbjct: 178 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPDGINLQ-ERVVTVSGEPEQNR 234

Query: 254 KAMELVVSHLRK 289
           KA+EL++  +++
Sbjct: 235 KAVELIIQKIQE 246



 Score = 35.8 bits (81), Expect = 0.18
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
 Frame = +2

Query: 41  GSAMRT-----GLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVIS-SEEPPICG 202
           GS  RT     G    K+L+P   AGS+IG+ G TI  +Q ++GA +++   S+      
Sbjct: 37  GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYP 96

Query: 203 LQDDRVVEIQG 235
              +RV  IQG
Sbjct: 97  GTTERVCLIQG 107


>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens
           GN=NOVA2 PE=1 SV=1
          Length = 492

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 28/72 (38%), Positives = 48/72 (66%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGPKVQ 253
           KL+VP + AG +IG+ G T+K++ + SGA V++  S++P    LQ +RVV + GE  +V 
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ-ERVVTVSGEPEQVH 190

Query: 254 KAMELVVSHLRK 289
           KA+  +V  +++
Sbjct: 191 KAVSAIVQKVQE 202



 Score = 37.0 bits (84), Expect = 0.082
 Identities = 20/72 (27%), Positives = 38/72 (52%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGPKVQ 253
           K+L+P   AGS+IG+ G TI  +Q ++GA +++  S++        +RV  +QG    + 
Sbjct: 36  KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLVQGTAEALN 93

Query: 254 KAMELVVSHLRK 289
                +   +R+
Sbjct: 94  AVHSFIAEKVRE 105


>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375
           OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1
          Length = 606

 Score = 50.1 bits (118), Expect = 9e-06
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVIS---SEEPPICGLQDDRVVEIQGEGP 244
           +LLVP +Q+ SLIG+ G  IK I+  + A V+V+S   S+   +C ++ D VV I GE  
Sbjct: 142 RLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPE 201

Query: 245 KVQKAMELVVSHLRKFLVDRSILPL 319
            V++A+   VS +   +  R  +PL
Sbjct: 202 SVKQAL-FAVSAIMYKINPRENIPL 225



 Score = 35.8 bits (81), Expect = 0.18
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +2

Query: 41  GSAMRTGLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRV 220
           G + R+  +  K+L P+     +IG+ G+TIK I++ SG+ + V  S     CG  +  +
Sbjct: 304 GGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTK--CGDDECVI 361

Query: 221 VEIQGEGPKVQKAMEL-VVSHLRKFLVD 301
           +    E P   K+M +  V  L++++ D
Sbjct: 362 IVTATESPDDMKSMAVEAVLLLQEYIND 389



 Score = 31.6 bits (70), Expect = 3.5
 Identities = 21/75 (28%), Positives = 37/75 (49%)
 Frame = +2

Query: 65  VSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGP 244
           V  +LLV     G +IG+ G+ I  I+  + A + +   ++        D +VE+ GE  
Sbjct: 395 VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVS 446

Query: 245 KVQKAMELVVSHLRK 289
            V+ A+  +V  LR+
Sbjct: 447 SVRDALIQIVLRLRE 461


>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K
           OS=Rattus norvegicus GN=Hnrnpk PE=1 SV=1
          Length = 463

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 23/77 (29%), Positives = 49/77 (63%)
 Frame = +2

Query: 62  LVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEG 241
           +++T++ +P   AGS+IG+ G  IK I+ +SGA +++    + P+ G  +DR++ I G  
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQ 441

Query: 242 PKVQKAMELVVSHLRKF 292
            ++Q A  L+ + ++++
Sbjct: 442 DQIQNAQYLLQNSVKQY 458


>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K
           OS=Oryctolagus cuniculus GN=HNRNPK PE=2 SV=1
          Length = 463

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 23/77 (29%), Positives = 49/77 (63%)
 Frame = +2

Query: 62  LVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEG 241
           +++T++ +P   AGS+IG+ G  IK I+ +SGA +++    + P+ G  +DR++ I G  
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQ 441

Query: 242 PKVQKAMELVVSHLRKF 292
            ++Q A  L+ + ++++
Sbjct: 442 DQIQNAQYLLQNSVKQY 458


>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K
           OS=Pongo abelii GN=HNRNPK PE=2 SV=1
          Length = 464

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 23/77 (29%), Positives = 49/77 (63%)
 Frame = +2

Query: 62  LVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEG 241
           +++T++ +P   AGS+IG+ G  IK I+ +SGA +++    + P+ G  +DR++ I G  
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQ 441

Query: 242 PKVQKAMELVVSHLRKF 292
            ++Q A  L+ + ++++
Sbjct: 442 DQIQNAQYLLQNSVKQY 458


>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K
           OS=Mus musculus GN=Hnrnpk PE=1 SV=1
          Length = 463

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 23/77 (29%), Positives = 49/77 (63%)
 Frame = +2

Query: 62  LVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEG 241
           +++T++ +P   AGS+IG+ G  IK I+ +SGA +++    + P+ G  +DR++ I G  
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEG-SEDRIITITGTQ 441

Query: 242 PKVQKAMELVVSHLRKF 292
            ++Q A  L+ + ++++
Sbjct: 442 DQIQNAQYLLQNSVKQY 458
tr_hit_id A9T1H6
Definition tr|A9T1H6|A9T1H6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 122
Score (bit) 139.0
E-value 1.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962886|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_A24, 5'
         (620 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T1H6|A9T1H6_PHYPA Predicted protein (Fragment) OS=Physcomit...   139   1e-31
tr|A9NUV7|A9NUV7_PICSI Putative uncharacterized protein OS=Picea...   139   1e-31
tr|A9S676|A9S676_PHYPA Predicted protein (Fragment) OS=Physcomit...   135   3e-30
tr|Q9SR13|Q9SR13_ARATH Putative RNA-binding protein (AT3g04610/F...   129   1e-28
tr|Q58T16|Q58T16_ARATH FLK OS=Arabidopsis thaliana GN=FLK PE=4 SV=1   129   1e-28
tr|A7QMQ0|A7QMQ0_VITVI Chromosome undetermined scaffold_127, who...   129   1e-28
tr|A5ASG9|A5ASG9_VITVI Putative uncharacterized protein OS=Vitis...   129   1e-28
tr|Q2QMN6|Q2QMN6_ORYSJ FLK, putative, expressed OS=Oryza sativa ...   124   4e-27
tr|Q0IM50|Q0IM50_ORYSJ Os12g0597600 protein (Fragment) OS=Oryza ...   124   4e-27
tr|B8LM14|B8LM14_PICSI Putative uncharacterized protein OS=Picea...   124   4e-27
tr|B7EC76|B7EC76_ORYSJ cDNA clone:J013062H18, full insert sequen...   124   4e-27
tr|B6T5L0|B6T5L0_MAIZE KH domain containing protein OS=Zea mays ...   121   4e-26
tr|B6U2B4|B6U2B4_MAIZE Nucleic acid binding protein OS=Zea mays ...   120   8e-26
tr|Q8W5C2|Q8W5C2_ORYSA Putative RNA binding protein OS=Oryza sat...   117   5e-25
tr|Q10GH8|Q10GH8_ORYSJ Os03g0627500 protein OS=Oryza sativa subs...   117   5e-25
tr|Q10GH7|Q10GH7_ORYSJ KH domain containing protein, expressed O...   117   5e-25
tr|B8AN46|B8AN46_ORYSI Putative uncharacterized protein OS=Oryza...   117   5e-25
tr|A3AKL1|A3AKL1_ORYSJ Putative uncharacterized protein OS=Oryza...   117   5e-25
tr|A7QUD9|A7QUD9_VITVI Chromosome chr11 scaffold_177, whole geno...   115   2e-24
tr|A7PUN7|A7PUN7_VITVI Chromosome chr7 scaffold_31, whole genome...   112   2e-23
tr|A5C3D0|A5C3D0_VITVI Putative uncharacterized protein OS=Vitis...   112   2e-23
tr|Q9SZH4|Q9SZH4_ARATH Putative nucleic acid binding protein OS=...   106   1e-21
tr|B6T6U2|B6T6U2_MAIZE Nucleic acid binding protein OS=Zea mays ...   101   3e-20
tr|Q9AY47|Q9AY47_ORYSA Putative nucleic acid binding protein OS=...   100   5e-20
tr|Q7XC34|Q7XC34_ORYSJ Os10g0564000 protein OS=Oryza sativa subs...   100   5e-20
tr|A2ZAB0|A2ZAB0_ORYSI Putative uncharacterized protein OS=Oryza...   100   5e-20
tr|B6TJ76|B6TJ76_MAIZE Nucleic acid binding protein OS=Zea mays ...    96   1e-18
tr|B8A3G9|B8A3G9_MAIZE Putative uncharacterized protein OS=Zea m...    96   2e-18
tr|B4F9P2|B4F9P2_MAIZE Putative uncharacterized protein OS=Zea m...    89   3e-16
tr|B8BMU2|B8BMU2_ORYSI Putative uncharacterized protein OS=Oryza...    83   1e-14

>tr|A9T1H6|A9T1H6_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_42908 PE=4 SV=1
          Length = 375

 Score =  139 bits (350), Expect = 1e-31
 Identities = 79/122 (64%), Positives = 92/122 (75%), Gaps = 4/122 (3%)
 Frame = +2

Query: 2   HKRVIDGLESE-IDGSAMRTGL-VSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVI 175
           H+RVI+G E E +D      G  VS++LLV  TQAGSLIGRQG TIKSIQD SGA VRV+
Sbjct: 83  HRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDTSGANVRVL 142

Query: 176 SSEEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFERAVQS--QGQ 349
            +EE P+C L DDRVVE+QG+   VQ+AMELVVSHLRKFLVDRS+LPLFE  V +    Q
Sbjct: 143 PAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDRSVLPLFELNVMANQNNQ 202

Query: 350 QS 355
           QS
Sbjct: 203 QS 204



 Score = 35.4 bits (80), Expect = 2.7
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +2

Query: 65  VSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGP 244
           V+  + +P++ A ++IG  G  I  ++  SGA + +  +   P      +  VEI G   
Sbjct: 282 VTQHMQIPLSYADAIIGSAGANISYMRRTSGATITIQETRSVP-----GEMTVEIHGSAS 336

Query: 245 KVQKAMELV 271
           +VQ A +L+
Sbjct: 337 QVQTAQQLI 345


>tr|A9NUV7|A9NUV7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 481

 Score =  139 bits (350), Expect = 1e-31
 Identities = 89/215 (41%), Positives = 119/215 (55%), Gaps = 9/215 (4%)
 Frame = +2

Query: 2   HKRVIDGL---ESEIDGSAMR--TGLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIV 166
           HKR+I+G      E+ G A +  +G +ST+LLV  TQAGSLIGRQG TIK+IQ+ SGAIV
Sbjct: 155 HKRIIEGGPDGRGEL-GRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAIQEGSGAIV 213

Query: 167 RVISSEEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFE--RAV-- 334
           RV+++E+ P C L DDR+VE+QGE   V KA+EL+VSHLRKFLVDRS+LPLFE  R +  
Sbjct: 214 RVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRKFLVDRSVLPLFEADRTIGN 273

Query: 335 QSQGQQSLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHYXXXXXXXXX 514
           Q Q +++LP                                       +           
Sbjct: 274 QPQIEENLPHQSWGH---------------------------------NQSSSVPSSGGA 300

Query: 515 XXXXXHYSTPSFQHESYYPPADNFDSQSHHHGVSI 619
                 Y + +FQH++YYPP+D       HHG+S+
Sbjct: 301 GLGNTQYMSSAFQHDNYYPPSDLPLESQGHHGLSV 335



 Score = 37.4 bits (85), Expect = 0.72
 Identities = 26/99 (26%), Positives = 47/99 (47%)
 Frame = +2

Query: 65  VSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGP 244
           V+  + +P++ A ++IG  G  I  ++ +SGA + V  +      G+  +  VEI+G   
Sbjct: 359 VTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETR-----GVPGEMTVEIRGTAT 413

Query: 245 KVQKAMELVVSHLRKFLVDRSILPLFERAVQSQGQQSLP 361
           +VQ A +L+    + F+   S  P    +    G  S P
Sbjct: 414 QVQTAQQLI----QNFMAGASGPPANTYSSVDSGYNSYP 448


>tr|A9S676|A9S676_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_43419 PE=4 SV=1
          Length = 355

 Score =  135 bits (339), Expect = 3e-30
 Identities = 77/122 (63%), Positives = 92/122 (75%), Gaps = 5/122 (4%)
 Frame = +2

Query: 2   HKRVIDGLESEIDGSAMRTG--LVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVI 175
           H+RVI+G E E   + +  G   VS++LLV  TQAGSLIGRQG TIKSIQD SGA VRV+
Sbjct: 80  HRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDSSGATVRVL 139

Query: 176 -SSEEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFE--RAVQSQG 346
            ++EE P+C L DDRVVE+ GE   VQ+A ELVV+HLRKFLVDRS+LPLFE  RAV +Q 
Sbjct: 140 PAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDRSVLPLFELNRAVANQS 199

Query: 347 QQ 352
            Q
Sbjct: 200 NQ 201



 Score = 35.0 bits (79), Expect = 3.6
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +2

Query: 65  VSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGP 244
           V+  + +P++ A ++IG  G  I  ++  SGA + +  +   P      +  VEI G   
Sbjct: 280 VTQHMQIPLSYADAIIGGAGANISYMRRTSGATITIQETRSVP-----GEMTVEIHGSAS 334

Query: 245 KVQKAMELV 271
           +VQ A +L+
Sbjct: 335 QVQTAQQLI 343


>tr|Q9SR13|Q9SR13_ARATH Putative RNA-binding protein
           (AT3g04610/F7O18_9) OS=Arabidopsis thaliana GN=At3g04610
           PE=2 SV=1
          Length = 577

 Score =  129 bits (325), Expect = 1e-28
 Identities = 66/117 (56%), Positives = 85/117 (72%)
 Frame = +2

Query: 2   HKRVIDGLESEIDGSAMRTGLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISS 181
           H R++DGL+ E    A     VST+LLVP +QAGSLIG+QG T+K+IQ+ S  IVRV+ S
Sbjct: 257 HMRIVDGLDGEAS-QAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGS 315

Query: 182 EEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFERAVQSQGQQ 352
           E+ P+  LQDDRVVE+ GE   V +A+EL+ SHLRKFLVDRSI+P FE  +Q   +Q
Sbjct: 316 EDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQ 372



 Score = 34.7 bits (78), Expect = 4.7
 Identities = 15/40 (37%), Positives = 28/40 (70%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPP 193
           ++LVP  + GS+IGR+G  IK I +++ A ++++  + PP
Sbjct: 190 RMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL--DGPP 227


>tr|Q58T16|Q58T16_ARATH FLK OS=Arabidopsis thaliana GN=FLK PE=4 SV=1
          Length = 577

 Score =  129 bits (325), Expect = 1e-28
 Identities = 66/117 (56%), Positives = 85/117 (72%)
 Frame = +2

Query: 2   HKRVIDGLESEIDGSAMRTGLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISS 181
           H R++DGL+ E    A     VST+LLVP +QAGSLIG+QG T+K+IQ+ S  IVRV+ S
Sbjct: 257 HMRIVDGLDGEAS-QAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGS 315

Query: 182 EEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFERAVQSQGQQ 352
           E+ P+  LQDDRVVE+ GE   V +A+EL+ SHLRKFLVDRSI+P FE  +Q   +Q
Sbjct: 316 EDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQ 372



 Score = 34.7 bits (78), Expect = 4.7
 Identities = 15/40 (37%), Positives = 28/40 (70%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPP 193
           ++LVP  + GS+IGR+G  IK I +++ A ++++  + PP
Sbjct: 190 RMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL--DGPP 227


>tr|A7QMQ0|A7QMQ0_VITVI Chromosome undetermined scaffold_127, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00002157001 PE=4 SV=1
          Length = 400

 Score =  129 bits (324), Expect = 1e-28
 Identities = 70/113 (61%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   HKRVIDGLESEIDGSAMRTG-LVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVIS 178
           HKR++DGLE   D S M  G  VST+LLV  +QAGSLIG+QG T+KSIQ+ S  IVRV+ 
Sbjct: 118 HKRIVDGLEG--DSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLG 175

Query: 179 SEEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFERAVQ 337
           +E+ PI  LQDDRVVE+ GE   V KA+EL+ SHLRKFLVDRS++PLFE  +Q
Sbjct: 176 AEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQ 228



 Score = 33.9 bits (76), Expect = 7.9
 Identities = 15/40 (37%), Positives = 28/40 (70%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPP 193
           ++LVP  + GS+IGR+G  IK I +++ A ++++  + PP
Sbjct: 51  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL--DGPP 88


>tr|A5ASG9|A5ASG9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_007074 PE=4 SV=1
          Length = 534

 Score =  129 bits (324), Expect = 1e-28
 Identities = 70/113 (61%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   HKRVIDGLESEIDGSAMRTG-LVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVIS 178
           HKR++DGLE   D S M  G  VST+LLV  +QAGSLIG+QG T+KSIQ+ S  IVRV+ 
Sbjct: 198 HKRIVDGLEG--DSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLG 255

Query: 179 SEEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFERAVQ 337
           +E+ PI  LQDDRVVE+ GE   V KA+EL+ SHLRKFLVDRS++PLFE  +Q
Sbjct: 256 AEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQ 308



 Score = 33.9 bits (76), Expect = 7.9
 Identities = 15/40 (37%), Positives = 28/40 (70%)
 Frame = +2

Query: 74  KLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPP 193
           ++LVP  + GS+IGR+G  IK I +++ A ++++  + PP
Sbjct: 131 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL--DGPP 168


>tr|Q2QMN6|Q2QMN6_ORYSJ FLK, putative, expressed OS=Oryza sativa
           subsp. japonica GN=LOC_Os12g40560 PE=4 SV=2
          Length = 517

 Score =  124 bits (311), Expect = 4e-27
 Identities = 68/109 (62%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   HKRVIDGLESEIDGSAMRTGLVS-TKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVIS 178
           HKR+ DGL+ E D      G V  T+LLVP +QAGSLIG+QG TIKSIQD S  ++R++ 
Sbjct: 185 HKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRILE 244

Query: 179 SEEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFE 325
           S  PP+  L DDRVVEIQGE   V KA+EL+ SHLRKFLVDRS+LPLFE
Sbjct: 245 SV-PPVA-LSDDRVVEIQGEPLDVHKAVELIASHLRKFLVDRSVLPLFE 291



 Score = 36.2 bits (82), Expect = 1.6
 Identities = 23/69 (33%), Positives = 38/69 (55%)
 Frame = +2

Query: 65  VSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGP 244
           ++  + VP++ A ++IG  G +I  I+  SGA    IS +E    G+  +  VEI G   
Sbjct: 390 ITHSMQVPLSYADAVIGAAGASISYIRRHSGA---TISIQE----GVPGEMTVEISGSAS 442

Query: 245 KVQKAMELV 271
           +VQ A +L+
Sbjct: 443 QVQTAQQLI 451


>tr|Q0IM50|Q0IM50_ORYSJ Os12g0597600 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os12g0597600 PE=4 SV=1
          Length = 367

 Score =  124 bits (311), Expect = 4e-27
 Identities = 68/109 (62%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   HKRVIDGLESEIDGSAMRTGLVS-TKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVIS 178
           HKR+ DGL+ E D      G V  T+LLVP +QAGSLIG+QG TIKSIQD S  ++R++ 
Sbjct: 35  HKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRILE 94

Query: 179 SEEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFE 325
           S  PP+  L DDRVVEIQGE   V KA+EL+ SHLRKFLVDRS+LPLFE
Sbjct: 95  SV-PPVA-LSDDRVVEIQGEPLDVHKAVELIASHLRKFLVDRSVLPLFE 141



 Score = 36.2 bits (82), Expect = 1.6
 Identities = 23/69 (33%), Positives = 38/69 (55%)
 Frame = +2

Query: 65  VSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISSEEPPICGLQDDRVVEIQGEGP 244
           ++  + VP++ A ++IG  G +I  I+  SGA    IS +E    G+  +  VEI G   
Sbjct: 240 ITHSMQVPLSYADAVIGAAGASISYIRRHSGA---TISIQE----GVPGEMTVEISGSAS 292

Query: 245 KVQKAMELV 271
           +VQ A +L+
Sbjct: 293 QVQTAQQLI 301


>tr|B8LM14|B8LM14_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 490

 Score =  124 bits (311), Expect = 4e-27
 Identities = 62/121 (51%), Positives = 83/121 (68%)
 Frame = +2

Query: 2   HKRVIDGLESEIDGSAMRTGLVSTKLLVPVTQAGSLIGRQGTTIKSIQDDSGAIVRVISS 181
           HKR+I+G++          G   T+LL+   Q+GSLIG+QG TIKSIQ++SG   +V+ S
Sbjct: 120 HKRIIEGIDEVGRTQQAAGGPTITRLLLAGIQSGSLIGKQGATIKSIQENSGVAAKVVGS 179

Query: 182 EEPPICGLQDDRVVEIQGEGPKVQKAMELVVSHLRKFLVDRSILPLFERAVQSQGQQSLP 361
           E+ P C L DD+V+EIQGE   V KA+ELVVSHLRKFLVDRS+LP++E  +    Q  + 
Sbjct: 180 EDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLVDRSVLPMYEMNMSKTNQSQME 239

Query: 362 Q 364
           Q
Sbjct: 240 Q 240