DK962895 |
Clone id |
TST39A01NGRL0015_B09 |
Library |
TST39 |
Length |
668 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_B09. 5' end sequence. |
Accession |
DK962895 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1243Contig1 |
Sequence |
GAAGAGAATCTCTAAAAGCAGGCTTTTAAATTTTCTACTTCTTCTGTGCATCTTCAGTTT TTATTTTTCCTTCTAGCTTTGTGTAATTAGGGGTGATTAGTGCCTAATTATCCATCAACA GCAAGCTTAACCACCCACCAACAAGCTTAATTACGAGAAGATGGTTAATGACAGGACCCC GCTGCTGCCCCAAACCCAACAGGCAAGTGCTGGTAACTTTCCTTCAAGCAATGAAACAGG GAGGACCTCAAGCAGAAAAGGTGCGGTTTTGGTAGCAGTTTGCGTGTTCCTCGGGCTTTT GGGCCTTTGGAGGTTGTCCTCCACAAACCCAGAAGACACAAAAACCATGCAGACTCTGTT GTCGGCAGCAGACCGGCCGCTGAGAGCCAACGAAGGCCTCAATTATCTGGTGGTAGGCGA TTGGGGAAGAGAGGGATTCTACAACCAGTCCCTGCTCGCTACCCAAATGGGGAGGATTGC GCAAGAGCTGGGCATAGAATTTGTTATCTCGGCAGGGGACAACTTTTACGATACCGGACT CACAGGCGAAGACGATCCTGCCTTCTCCTCATCGTTCACTGATGTGTACACTGCTTCTAG CTTGCAAACCACTTGGTACACAGTGCTTGGAAATCATGACTATATGGGAGATGTGCTTGC TGAGTTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O97860 |
Definition |
sp|O97860|PPA5_RABIT Tartrate-resistant acid phosphatase type 5 OS=Oryctolagus cuniculus |
Align length |
96 |
Score (bit) |
75.1 |
E-value |
3.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962895|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_B09, 5' (655 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O97860|PPA5_RABIT Tartrate-resistant acid phosphatase type 5 ... 75 3e-13 sp|P13686|PPA5_HUMAN Tartrate-resistant acid phosphatase type 5 ... 72 3e-12 sp|Q05117|PPA5_MOUSE Tartrate-resistant acid phosphatase type 5 ... 69 2e-11 sp|P29288|PPA5_RAT Tartrate-resistant acid phosphatase type 5 OS... 69 2e-11 sp|P09889|PPA5_PIG Tartrate-resistant acid phosphatase type 5 OS... 65 4e-10 sp|Q89RJ4|GLGA1_BRAJA Glycogen synthase 1 OS=Bradyrhizobium japo... 33 1.0 sp|Q80VY2|CA183_MOUSE Uncharacterized protein C1orf183 homolog O... 33 1.7 sp|Q74C57|APGM_GEOSL Probable 2,3-bisphosphoglycerate-independen... 33 1.7 sp|Q5ND04|HSF5_MOUSE Heat shock factor protein 5 OS=Mus musculus... 32 3.8 sp|A4R596|IML1_MAGGR Vacuolar membrane-associated protein IML1 O... 31 5.0 sp|Q5RAB7|S39AE_PONAB Zinc transporter ZIP14 OS=Pongo abelii GN=... 31 6.5 sp|Q15043|S39AE_HUMAN Zinc transporter ZIP14 OS=Homo sapiens GN=... 31 6.5 sp|Q8WV44|TRI41_HUMAN Tripartite motif-containing protein 41 OS=... 31 6.5 sp|Q9JVR5|MACB_NEIMA Macrolide export ATP-binding/permease prote... 30 8.5 sp|Q9XSJ4|ENOA_BOVIN Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4 30 8.5 sp|Q00975|CAC1B_HUMAN Voltage-dependent N-type calcium channel s... 30 8.5 sp|P58812|APGM_METAC 2,3-bisphosphoglycerate-independent phospho... 30 8.5 sp|Q876L5|AKR1_SACBA Palmitoyltransferase AKR1 OS=Saccharomyces ... 30 8.5
>sp|O97860|PPA5_RABIT Tartrate-resistant acid phosphatase type 5 OS=Oryctolagus cuniculus GN=ACP5 PE=2 SV=1 Length = 325
Score = 75.1 bits (183), Expect = 3e-13 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 6/96 (6%) Frame = +2
Query: 386 ANEGLNYLVVGDWG---REGFYNQSLLAT--QMGRIAQELGIEFVISAGDNFYDTGLTGE 550 A L ++ VGDWG F+ +A Q+G++ Q LG F++S GDNFY +G+ Sbjct: 22 ATPTLRFVAVGDWGGVPNAPFHTAREMANAKQIGKVVQMLGAHFILSLGDNFYFSGVQSV 81
Query: 551 DDPAFSSSFTDVYTASSLQTT-WYTVLGNHDYMGDV 655 D F +F DV++ SLQ WY + GNHD++G+V Sbjct: 82 SDKRFQETFEDVFSDRSLQNVPWYVLAGNHDHIGNV 117
>sp|P13686|PPA5_HUMAN Tartrate-resistant acid phosphatase type 5 OS=Homo sapiens GN=ACP5 PE=1 SV=3 Length = 325
Score = 72.0 bits (175), Expect = 3e-12 Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 6/96 (6%) Frame = +2
Query: 386 ANEGLNYLVVGDWG---REGFYNQSLLAT--QMGRIAQELGIEFVISAGDNFYDTGLTGE 550 A L ++ VGDWG F+ +A ++ R Q LG +F++S GDNFY TG+ Sbjct: 22 ATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGADFILSLGDNFYFTGVQDI 81
Query: 551 DDPAFSSSFTDVYTASSL-QTTWYTVLGNHDYMGDV 655 +D F +F DV++ SL + WY + GNHD++G+V Sbjct: 82 NDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNV 117
>sp|Q05117|PPA5_MOUSE Tartrate-resistant acid phosphatase type 5 OS=Mus musculus GN=Acp5 PE=2 SV=2 Length = 327
Score = 69.3 bits (168), Expect = 2e-11 Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 6/92 (6%) Frame = +2
Query: 398 LNYLVVGDWG---REGFYNQSLLAT--QMGRIAQELGIEFVISAGDNFYDTGLTGEDDPA 562 L ++ VGDWG F+ +A ++ R Q +G +F++S GDNFY TG+ D Sbjct: 28 LRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQTMGADFIMSLGDNFYFTGVHDASDKR 87
Query: 563 FSSSFTDVYTASSLQT-TWYTVLGNHDYMGDV 655 F +F DV++ +L+ WY + GNHD++G+V Sbjct: 88 FQETFEDVFSDRALRNIPWYVLAGNHDHLGNV 119
>sp|P29288|PPA5_RAT Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus GN=Acp5 PE=1 SV=1 Length = 327
Score = 68.9 bits (167), Expect = 2e-11 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 6/92 (6%) Frame = +2
Query: 398 LNYLVVGDWG---REGFYNQSLLAT--QMGRIAQELGIEFVISAGDNFYDTGLTGEDDPA 562 L ++ VGDWG F+ +A ++ R Q +G +F++S GDNFY TG+ +D Sbjct: 28 LRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQIMGADFIMSLGDNFYFTGVHDANDKR 87
Query: 563 FSSSFTDVYTASSLQT-TWYTVLGNHDYMGDV 655 F +F DV++ +L+ WY + GNHD++G+V Sbjct: 88 FQETFEDVFSDRALRNIPWYVLAGNHDHLGNV 119
>sp|P09889|PPA5_PIG Tartrate-resistant acid phosphatase type 5 OS=Sus scrofa GN=ACP5 PE=1 SV=4 Length = 340
Score = 64.7 bits (156), Expect = 4e-10 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 6/92 (6%) Frame = +2
Query: 398 LNYLVVGDWG---REGFYNQSLLATQ--MGRIAQELGIEFVISAGDNFYDTGLTGEDDPA 562 L ++ VGDWG F+ +A + + LG +F++S GDNFY TG+ D Sbjct: 34 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKR 93
Query: 563 FSSSFTDVYTASSLQTT-WYTVLGNHDYMGDV 655 F +F DV++ SL+ W+ + GNHD++G+V Sbjct: 94 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNV 125
>sp|Q89RJ4|GLGA1_BRAJA Glycogen synthase 1 OS=Bradyrhizobium japonicum GN=glgA1 PE=3 SV=1 Length = 462
Score = 33.5 bits (75), Expect = 1.0 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 18/117 (15%) Frame = +2
Query: 293 GLLGLWRLSSTNPEDTKTMQTLLSAADRPLRANEGLNYLVVGDW-GREGFYNQSLLATQM 469 GL GL RL S E T + + + D P + GDW G++ N + Q Sbjct: 221 GLEGLLRLRSDAAELTGILNGIDESWD-PRSCAQLAQQFGAGDWVGKKA--NADYVRKQF 277
Query: 470 G-------------RIAQELGIEFVISAGDNFYDTG----LTGEDDPAFSSSFTDVY 589 G R+ + GI+ V+SA D D G +TG +PA + D + Sbjct: 278 GLAVSRGPMFGIVARLVHQKGIDLVLSAADEIIDAGGQIVVTGSGEPALEQALIDAH 334
>sp|Q80VY2|CA183_MOUSE Uncharacterized protein C1orf183 homolog OS=Mus musculus PE=2 SV=1 Length = 300
Score = 32.7 bits (73), Expect = 1.7 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Frame = -1
Query: 328 VCGGQP---PKAQKPEEHANCYQNRTFSA*GPPCFIA*RKVTSTCLLGLGQQRGP-VINH 161 VCG + PK Q PEEH +C Q T ++ TST L+ G+ R P V+ Sbjct: 111 VCGKELAVLPKTQLPEEHQSCTQQGTE-------WVEPDDWTST-LMSRGRNRQPLVLGD 162
Query: 160 LLVIKLVGGWLSL 122 + LVG WL L Sbjct: 163 NVFADLVGNWLDL 175
>sp|Q74C57|APGM_GEOSL Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacter sulfurreducens GN=apgM PE=3 SV=1 Length = 399
Score = 32.7 bits (73), Expect = 1.7 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Frame = +1
Query: 361 VGSRPAAESQRRPQLSGGRRLGKRGILQPVPARYPNGEDCARAG-----HRICYLG 513 +G + ++ R P + R G+ G+ + VP YP G D A R CY G Sbjct: 19 LGGKTPLQAARTPHMDAMARRGRIGLARTVPEGYPPGSDVANLSVFGYDPRACYTG 74
>sp|Q5ND04|HSF5_MOUSE Heat shock factor protein 5 OS=Mus musculus GN=Hsf5 PE=2 SV=1 Length = 624
Score = 31.6 bits (70), Expect = 3.8 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = +2
Query: 170 DRTPLLPQTQQASAGNFPSSNETGRTSSRKG 262 DRTP+ P+T Q S G P ET T S KG Sbjct: 250 DRTPIPPRTWQNSLGMHPGQVETSPTFSDKG 280
>sp|A4R596|IML1_MAGGR Vacuolar membrane-associated protein IML1 OS=Magnaporthe grisea GN=IML1 PE=3 SV=1 Length = 1846
Score = 31.2 bits (69), Expect = 5.0 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +1
Query: 307 LEVVLHKPRRHKNHADSVVGSRPAAESQRRPQLSGGRRLGK 429 +++ KP R+ N+ DS A E + ++ G RRLGK Sbjct: 1146 IDIATPKPERNWNYIDSTSLDPAAGEKEEETRIEGTRRLGK 1186
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRL4 |
Definition |
tr|A9NRL4|A9NRL4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
90 |
Score (bit) |
140.0 |
E-value |
5.0e-32 |
Report |
|