DK962928 |
Clone id |
TST39A01NGRL0015_C18 |
Library |
TST39 |
Length |
643 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_C18. 5' end sequence. |
Accession |
DK962928 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL299Contig1 |
Sequence |
GTTGGGTTTTTTGTCTGTCTCCTTCTCTCGCTTCGGCTAAGGTTCTCATGTAGTGTAACT GTGAGCCGCGCACACTCTCTCGTACACACAGCATACTCTCTCTAGCCCACTAGATATTTT GCTTCTTCTGCTTATACGTTTCTTCTGGTGGGCGTGGTAAGGGTTAGAGCTAATTGCCTC GCGTTTCTGTGTTCCCATCCGCGATCCATCTCTTCTGCAAGGTTTACATTTTGGAGAAAT GGCGTCCTTGACAGAGAAGGCGACCCACATGAGCAAACCCATGATGGGCTCCGGGCAACT AGCCTCTCGGCACTTGGTGAAGAGGACCATGGCTAGCTCACTCGGAACAGGCTTACGCAG AGGTATGGGTCTTCCCAAGCTGGACATGACCTCACCTAGCAATGGCGCGGCGGCTCTCAG GTCGCATTCCTTTGGAAAGTCTATCATGTCAGCGGACAGCCCTTTTGCTCCTTCCCCCAA GTCAAGGGTTCCCCTTTCCCCTGTCTGTATGGCTGCAGCAGCAGATGCTGGCGGTAGCGA CGCCTCTCCGAGCGTGTCTACCTCATCTGAAGGATTCCTTGCGAAGTATCCTGCATTGGT GACTGGATTCTTCTTCTTCATGTGGTACTTCCTCAATGTGATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P49133 |
Definition |
sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays |
Align length |
26 |
Score (bit) |
54.7 |
E-value |
4.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962928|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_C18, 5' (643 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chl... 55 4e-07 sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chl... 54 9e-07 sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chl... 52 3e-06 sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chl... 51 5e-06 sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chlor... 48 4e-05 sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, ch... 43 0.001 sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chl... 39 0.030 sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=M... 34 0.57 sp|A1S3Y5|ACPS_SHEAM Holo-[acyl-carrier-protein] synthase OS=She... 34 0.74 sp|Q2NCF7|ACPS_ERYLH Holo-[acyl-carrier-protein] synthase OS=Ery... 34 0.74 sp|A5FVX4|ACPS_ACICJ Holo-[acyl-carrier-protein] synthase OS=Aci... 34 0.74 sp|Q1GT99|ACPS_SPHAL Holo-[acyl-carrier-protein] synthase OS=Sph... 33 0.97 sp|P59475|ACPS_BUCBP Holo-[acyl-carrier-protein] synthase OS=Buc... 33 0.97 sp|A8FSE0|ACPS_SHESH Holo-[acyl-carrier-protein] synthase OS=She... 33 1.3 sp|A3QBT1|ACPS_SHELP Holo-[acyl-carrier-protein] synthase OS=She... 33 1.3 sp|B0TIW1|ACPS_SHEHH Holo-[acyl-carrier-protein] synthase OS=She... 33 1.3 sp|Q07Z00|ACPS_SHEFN Holo-[acyl-carrier-protein] synthase OS=She... 33 1.7 sp|A8H1D1|ACPS_SHEPA Holo-[acyl-carrier-protein] synthase OS=She... 32 2.2 sp|Q7N1X9|ACPS_PHOLL Holo-[acyl-carrier-protein] synthase OS=Pho... 32 2.2 sp|Q54K95|ATTY_DICDI Tyrosine aminotransferase OS=Dictyostelium ... 32 3.7 sp|Q24751|ATPB_DROVI ATP synthase subunit beta, mitochondrial (F... 32 3.7 sp|Q12KI5|ACPS_SHEDO Holo-[acyl-carrier-protein] synthase OS=She... 32 3.7 sp|Q2NS17|ACPS_SODGM Holo-[acyl-carrier-protein] synthase OS=Sod... 31 4.8 sp|A6TCH7|ACPS_KLEP7 Holo-[acyl-carrier-protein] synthase OS=Kle... 31 4.8 sp|Q869N2|PAKB_DICDI Serine/threonine-protein kinase pakB OS=Dic... 31 6.3 sp|A1RMC3|ACPS_SHESW Holo-[acyl-carrier-protein] synthase OS=She... 31 6.3 sp|A4Y4K8|ACPS_SHEPC Holo-[acyl-carrier-protein] synthase OS=She... 30 8.2
>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1 Length = 409
Score = 54.7 bits (130), Expect = 4e-07 Identities = 24/26 (92%), Positives = 24/26 (92%) Frame = +2
Query: 566 SEGFLAKYPALVTGFFFFMWYFLNVI 643 S GFL KYPALVTGFFFFMWYFLNVI Sbjct: 96 SVGFLEKYPALVTGFFFFMWYFLNVI 121
>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1 Length = 407
Score = 53.5 bits (127), Expect = 9e-07 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = +2
Query: 572 GFLAKYPALVTGFFFFMWYFLNVI 643 GFLAKYP LVTGFFFFMWYFLNVI Sbjct: 95 GFLAKYPFLVTGFFFFMWYFLNVI 118
>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 Length = 408
Score = 52.0 bits (123), Expect = 3e-06 Identities = 22/24 (91%), Positives = 22/24 (91%) Frame = +2
Query: 572 GFLAKYPALVTGFFFFMWYFLNVI 643 GF AKYP LVTGFFFFMWYFLNVI Sbjct: 96 GFFAKYPFLVTGFFFFMWYFLNVI 119
>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 404
Score = 51.2 bits (121), Expect = 5e-06 Identities = 23/31 (74%), Positives = 24/31 (77%) Frame = +2
Query: 551 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVI 643 S + GFL KYPALVTG FFFMWYFLNVI Sbjct: 85 SSGEAKTGFLEKYPALVTGSFFFMWYFLNVI 115
>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 Length = 402
Score = 48.1 bits (113), Expect = 4e-05 Identities = 19/24 (79%), Positives = 21/24 (87%) Frame = +2
Query: 572 GFLAKYPALVTGFFFFMWYFLNVI 643 GF ++YPAL TGFFFF WYFLNVI Sbjct: 90 GFFSRYPALTTGFFFFTWYFLNVI 113
>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 Length = 407
Score = 43.1 bits (100), Expect = 0.001 Identities = 19/31 (61%), Positives = 20/31 (64%) Frame = +2
Query: 551 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVI 643 S + GFL KYP LVTG MWYFLNVI Sbjct: 88 SAGETKVGFLGKYPWLVTGILLLMWYFLNVI 118
>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1 Length = 414
Score = 38.5 bits (88), Expect = 0.030 Identities = 18/24 (75%), Positives = 18/24 (75%) Frame = +2
Query: 572 GFLAKYPALVTGFFFFMWYFLNVI 643 GF K L TGFFFFMWYFLNVI Sbjct: 103 GFFNK-ATLTTGFFFFMWYFLNVI 125
>sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=Mus musculus GN=Atg2a PE=1 SV=2 Length = 1914
Score = 34.3 bits (77), Expect = 0.57 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = +2
Query: 272 SKPMMGSGQLASRHLVKRTMASSLGTGLRRGMGLPKLDMTSPSNGAAALRSHSFGKSIMS 451 S P G++A L+ T SL G+ L L SPS+G + L +H F + + Sbjct: 402 STPPHSGGKMAPTPLLDTTRPDSLVKMTLGGVSLTLLQTASPSSGPSDLPTHFFAEFDAA 461
Query: 452 ADSPF 466 D PF Sbjct: 462 KDGPF 466
>sp|A1S3Y5|ACPS_SHEAM Holo-[acyl-carrier-protein] synthase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=acpS PE=3 SV=1 Length = 125
Score = 33.9 bits (76), Expect = 0.74 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +2
Query: 284 MGSGQ----LASRHLVKRTMASSLGTGLRRGMGLPKLDMTSPSNGAAALR 421 +GSGQ LA R K +A +LGTG+ RG+ ++ S GA +R Sbjct: 41 VGSGQRELYLAKRFAAKEAVAKALGTGIGRGVSFQHIETYSDEFGAPCVR 90
>sp|Q2NCF7|ACPS_ERYLH Holo-[acyl-carrier-protein] synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=acpS PE=3 SV=1 Length = 133
Score = 33.9 bits (76), Expect = 0.74 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +2
Query: 254 EKATHMSKPMMGSGQLASRHLVKRTMASSLGTGLRRGMGLPKLDMTSPSNGAAAL 418 E+A +P +G A R K + ++GTG RRG+ + + + + +GA L Sbjct: 35 ERAKARRRPFTIAGTYAKRFAAKEAFSKAVGTGFRRGVFMKDIGVVNARSGAPTL 89
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TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FTT3 |
Definition |
tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate translocator (Os01g0239200 protein) OS=Oryza sativa subsp. japonica |
Align length |
36 |
Score (bit) |
56.6 |
E-value |
1.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962928|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_C18, 5' (643 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate trans... 57 1e-06 tr|Q9ARH5|Q9ARH5_ORYSA Triose phosphate/phosphate translocator O... 57 1e-06 tr|A2ZR52|A2ZR52_ORYSJ Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|Q9MSB6|Q9MSB6_MESCR Triose phosphate/phosphate translocator O... 55 5e-06 tr|A9U2X2|A9U2X2_PHYPA Predicted protein OS=Physcomitrella paten... 55 5e-06 tr|A7QPR8|A7QPR8_VITVI Chromosome chr10 scaffold_138, whole geno... 54 8e-06 tr|A5B912|A5B912_VITVI Putative uncharacterized protein OS=Vitis... 54 8e-06 tr|B8ABD8|B8ABD8_ORYSI Putative uncharacterized protein OS=Oryza... 54 1e-05 tr|Q9ZSR7|Q9ZSR7_ARATH Phosphate/triose-phosphate translocator (... 53 1e-05 tr|Q9FNL1|Q9FNL1_ARATH Phosphate/triose-phosphate translocator O... 53 1e-05 tr|Q93ZM3|Q93ZM3_ARATH AT5g46110/MCL19_16 OS=Arabidopsis thalian... 53 1e-05 tr|Q8LB04|Q8LB04_ARATH Phosphate/triose-phosphate translocator O... 53 1e-05 tr|Q2V313|Q2V313_ARATH Uncharacterized protein At5g46110.3 OS=Ar... 53 1e-05 tr|Q9ATY2|Q9ATY2_WHEAT Triose phosphate translocator OS=Triticum... 52 2e-05 tr|B6T5Y2|B6T5Y2_MAIZE Triose phosphate/phosphate translocator O... 52 3e-05 tr|B4FWC0|B4FWC0_MAIZE Putative uncharacterized protein OS=Zea m... 52 3e-05 tr|A9U2X6|A9U2X6_PHYPA Predicted protein OS=Physcomitrella paten... 51 5e-05 tr|Q60EU8|Q60EU8_ORYSJ Os05g0241200 protein OS=Oryza sativa subs... 51 7e-05 tr|A3B1R0|A3B1R0_ORYSJ Putative uncharacterized protein OS=Oryza... 51 7e-05 tr|A2Y286|A2Y286_ORYSI Putative uncharacterized protein OS=Oryza... 51 7e-05 tr|A7P2G6|A7P2G6_VITVI Chromosome chr1 scaffold_5, whole genome ... 50 2e-04 tr|B7FHQ9|B7FHQ9_MEDTR Putative uncharacterized protein OS=Medic... 49 3e-04 tr|A9NVP1|A9NVP1_PICSI Putative uncharacterized protein OS=Picea... 46 0.002 tr|Q40568|Q40568_TOBAC Phosphate translocator OS=Nicotiana tabac... 40 0.094 tr|Q2G9W8|Q2G9W8_NOVAD Holo-(Acyl-carrier-protein) synthase OS=N... 36 1.8 tr|A2FLJ4|A2FLJ4_TRIVA Putative uncharacterized protein OS=Trich... 36 2.3 tr|Q2IZM7|Q2IZM7_RHOP2 Putative uncharacterized protein OS=Rhodo... 35 3.0 tr|A4FFY3|A4FFY3_SACEN Putative antibiotic ABC transporter prote... 35 3.0 tr|Q4RF03|Q4RF03_TETNG Chromosome 13 SCAF15122, whole genome sho... 35 3.9 tr|B7RX65|B7RX65_9GAMM Holo-(Acyl-carrier-protein) synthase OS=m... 35 5.1
>tr|Q9FTT3|Q9FTT3_ORYSJ Putative triose phosphate/phosphate translocator (Os01g0239200 protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0086P08.33 PE=4 SV=1 Length = 417
Score = 56.6 bits (135), Expect = 1e-06 Identities = 26/36 (72%), Positives = 29/36 (80%), Gaps = 4/36 (11%) Frame = +2
Query: 548 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVI 643 P+ +TS E GFL KYPAL+TGFFFFMWYFLNVI Sbjct: 94 PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVI 129
>tr|Q9ARH5|Q9ARH5_ORYSA Triose phosphate/phosphate translocator OS=Oryza sativa PE=2 SV=1 Length = 417
Score = 56.6 bits (135), Expect = 1e-06 Identities = 26/36 (72%), Positives = 29/36 (80%), Gaps = 4/36 (11%) Frame = +2
Query: 548 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVI 643 P+ +TS E GFL KYPAL+TGFFFFMWYFLNVI Sbjct: 94 PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVI 129
>tr|A2ZR52|A2ZR52_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001024 PE=4 SV=1 Length = 277
Score = 56.6 bits (135), Expect = 1e-06 Identities = 26/36 (72%), Positives = 29/36 (80%), Gaps = 4/36 (11%) Frame = +2
Query: 548 PSVSTSSE----GFLAKYPALVTGFFFFMWYFLNVI 643 P+ +TS E GFL KYPAL+TGFFFFMWYFLNVI Sbjct: 59 PAAATSGEAKPAGFLEKYPALITGFFFFMWYFLNVI 94
>tr|Q9MSB6|Q9MSB6_MESCR Triose phosphate/phosphate translocator OS=Mesembryanthemum crystallinum GN=TPT PE=2 SV=1 Length = 404
Score = 54.7 bits (130), Expect = 5e-06 Identities = 24/31 (77%), Positives = 25/31 (80%) Frame = +2
Query: 551 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVI 643 S + GFL KYPALVTGFFFFMWYFLNVI Sbjct: 85 SAGEAKVGFLQKYPALVTGFFFFMWYFLNVI 115
>tr|A9U2X2|A9U2X2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227804 PE=4 SV=1 Length = 440
Score = 54.7 bits (130), Expect = 5e-06 Identities = 23/26 (88%), Positives = 25/26 (96%) Frame = +2
Query: 566 SEGFLAKYPALVTGFFFFMWYFLNVI 643 ++GFLAKYPALVTGFFFF WYFLNVI Sbjct: 126 AQGFLAKYPALVTGFFFFAWYFLNVI 151
>tr|A7QPR8|A7QPR8_VITVI Chromosome chr10 scaffold_138, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003047001 PE=4 SV=1 Length = 406
Score = 53.9 bits (128), Expect = 8e-06 Identities = 24/31 (77%), Positives = 25/31 (80%) Frame = +2
Query: 551 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVI 643 S + GFL KYPALVTGFFFFMWYFLNVI Sbjct: 87 SAGDAKIGFLDKYPALVTGFFFFMWYFLNVI 117
>tr|A5B912|A5B912_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028555 PE=4 SV=1 Length = 443
Score = 53.9 bits (128), Expect = 8e-06 Identities = 24/31 (77%), Positives = 25/31 (80%) Frame = +2
Query: 551 SVSTSSEGFLAKYPALVTGFFFFMWYFLNVI 643 S + GFL KYPALVTGFFFFMWYFLNVI Sbjct: 87 SAGDAKIGFLDKYPALVTGFFFFMWYFLNVI 117
>tr|B8ABD8|B8ABD8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01091 PE=4 SV=1 Length = 348
Score = 53.5 bits (127), Expect = 1e-05 Identities = 22/24 (91%), Positives = 23/24 (95%) Frame = +2
Query: 572 GFLAKYPALVTGFFFFMWYFLNVI 643 GFL KYPAL+TGFFFFMWYFLNVI Sbjct: 37 GFLEKYPALITGFFFFMWYFLNVI 60
>tr|Q9ZSR7|Q9ZSR7_ARATH Phosphate/triose-phosphate translocator (At5g46110/MCL19_16) OS=Arabidopsis thaliana GN=At5g46110 PE=2 SV=1 Length = 410
Score = 53.1 bits (126), Expect = 1e-05 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = +2
Query: 572 GFLAKYPALVTGFFFFMWYFLNVI 643 GFLAKYP LVTGFFFFMWYFLNVI Sbjct: 98 GFLAKYPWLVTGFFFFMWYFLNVI 121
>tr|Q9FNL1|Q9FNL1_ARATH Phosphate/triose-phosphate translocator OS=Arabidopsis thaliana PE=4 SV=1 Length = 426
Score = 53.1 bits (126), Expect = 1e-05 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = +2
Query: 572 GFLAKYPALVTGFFFFMWYFLNVI 643 GFLAKYP LVTGFFFFMWYFLNVI Sbjct: 98 GFLAKYPWLVTGFFFFMWYFLNVI 121
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