DK962929 |
Clone id |
TST39A01NGRL0015_C19 |
Library |
TST39 |
Length |
603 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_C19. 5' end sequence. |
Accession |
DK962929 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1498Contig1 |
Sequence |
CGCGACTGTTTTCTCCATCTTCGTCCTGCAGCGGCTTCTTCCTTTCCAGACTCCAGGGTT CAGTATGGGGCAGACTCTTGGGTGCATGCAAGTGGATCAGTCAACTGTAGCCATAAAAGA AAACTTTGGGAAGTTTGATCATGTTTTGGAGCCTGGTTGTCATTGTGTACCCTGGTGCCT TGGAAGTTATGTTGTTGGAGTATTATCAATGCGTGTGCAGCAATTAGATGTTCGATGTGA GACAAAAACAAAGGACAATGTATTTGTGAATGTTGTGGCATCTGTACAATATAGAGCTAT TCAAACTAATGCTAAGGATGCCTTCTACAAGCTCACAAATCCTCGCGAACAGATACAGTC TTATGTGTTTGATGTGGTGAGGGCTACTGTGCCAAAGATGAACTTGGATGATGTCTTTGA GCAAAAAAGTGAGGTTGGAAAGGCGGTTGCTGATGAACTGGAAAAGGCCATGTCCAATTA CGGATTTGAGATAGTGCAGACGTTGATTGTTGACATTGTCCCAGACGATACGGTGAAGCG AGCAATGAATGAAATCAATGCAGCCTCAAGAATGAGAGTTGCTACTCAGGAGAAAGCTGA AGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P16148 |
Definition |
sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus |
Align length |
68 |
Score (bit) |
90.9 |
E-value |
4.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962929|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_C19, 5' (603 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus GN=P... 91 4e-18 sp|P0ABC7|HFLK_ECOLI Protein hflK OS=Escherichia coli (strain K1... 52 2e-06 sp|P0ABC8|HFLK_ECO57 Protein hflK OS=Escherichia coli O157:H7 GN... 52 2e-06 sp|Q58237|Y827_METJA Uncharacterized protein MJ0827 OS=Methanoca... 50 1e-05 sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN... 49 2e-05 sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=S... 49 2e-05 sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus... 48 4e-05 sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN... 48 4e-05 sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizo... 47 6e-05 sp|Q8K914|HFLK_BUCAP Protein hflK OS=Buchnera aphidicola subsp. ... 47 6e-05 sp|P40605|HFLK_VIBPA Protein hflK OS=Vibrio parahaemolyticus GN=... 46 2e-04 sp|P57631|HFLK_BUCAI Protein hflK OS=Buchnera aphidicola subsp. ... 46 2e-04 sp|Q89A39|HFLK_BUCBP Protein hflK OS=Buchnera aphidicola subsp. ... 45 2e-04 sp|Q9KV09|HFLK_VIBCH Protein hflK OS=Vibrio cholerae GN=hflK PE=... 42 0.002 sp|Q9VZA4|BND7A_DROME Band 7 protein CG32245 OS=Drosophila melan... 42 0.003 sp|P27105|STOM_HUMAN Erythrocyte band 7 integral membrane protei... 41 0.004 sp|Q7PPU9|BND7A_ANOGA Band 7 protein AGAP004871 OS=Anopheles gam... 40 0.012 sp|Q16TM5|BND7A_AEDAE Band 7 protein AAEL010189 OS=Aedes aegypti... 40 0.012 sp|O83151|HFLK_TREPA Protein hflK OS=Treponema pallidum GN=hflK ... 39 0.016 sp|O28852|Y1420_ARCFU Uncharacterized protein AF_1420 OS=Archaeo... 37 0.059 sp|P24156|L2CC_DROME Protein l(2)37Cc OS=Drosophila melanogaster... 36 0.17 sp|Q55522|SYV_SYNY3 Valyl-tRNA synthetase OS=Synechocystis sp. (... 34 0.65 sp|Q0VAA2|CN16B_HUMAN Uncharacterized protein C14orf166B OS=Homo... 33 0.85 sp|P61243|YCF2_PHYPA Protein ycf2 OS=Physcomitrella patens GN=yc... 32 2.5 sp|Q97FI7|HCP1_CLOAB Hydroxylamine reductase 1 OS=Clostridium ac... 32 2.5 sp|Q039K4|TIG_LACC3 Trigger factor OS=Lactobacillus casei (strai... 31 5.5 sp|Q8Y759|PRSA1_LISMO Foldase protein prsA 1 OS=Listeria monocyt... 30 7.2 sp|Q71ZM6|PRSA1_LISMF Foldase protein prsA 1 OS=Listeria monocyt... 30 7.2 sp|Q92BR2|PRSA1_LISIN Foldase protein prsA 1 OS=Listeria innocua... 30 7.2 sp|A5EET6|CH602_BRASB 60 kDa chaperonin 2 OS=Bradyrhizobium sp. ... 30 7.2
>sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1 Length = 184
Score = 90.9 bits (224), Expect = 4e-18 Identities = 43/68 (63%), Positives = 54/68 (79%) Frame = +2
Query: 398 MNLDDVFEQKSEVGKAVADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAMNEINAASRMR 577 MNLDD+FEQK EV K+V +ELEK M YG+ I L+VDI+PDD+V+RAMNEINAA RM+ Sbjct: 1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQ 60
Query: 578 VATQEKAE 601 +A+ K E Sbjct: 61 LASLYKGE 68
>sp|P0ABC7|HFLK_ECOLI Protein hflK OS=Escherichia coli (strain K12) GN=hflK PE=1 SV=1 Length = 419
Score = 52.4 bits (124), Expect = 2e-06 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 3/165 (1%) Frame = +2
Query: 80 GCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETKTKDN 259 G + ++ + FGKF H++EPG + P + V V V++L T D Sbjct: 96 GFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDE-VKPVNVEAVRELAASGVMLTSDE 154
Query: 260 VFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVF-EQKSEV 436 V V +VQYR TN + Y +T+P + ++ +R + K +D + E ++ + Sbjct: 155 NVVRVEMNVQYRV--TNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVI 212
Query: 437 GKAVADELEKAMSNY--GFEIVQTLIVDIVPDDTVKRAMNEINAA 565 ELE+ + Y G ++ P + VK A ++ AA Sbjct: 213 RSDTQRELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAA 257
>sp|P0ABC8|HFLK_ECO57 Protein hflK OS=Escherichia coli O157:H7 GN=hflK PE=3 SV=1 Length = 419
Score = 52.4 bits (124), Expect = 2e-06 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 3/165 (1%) Frame = +2
Query: 80 GCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETKTKDN 259 G + ++ + FGKF H++EPG + P + V V V++L T D Sbjct: 96 GFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDE-VKPVNVEAVRELAASGVMLTSDE 154
Query: 260 VFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVF-EQKSEV 436 V V +VQYR TN + Y +T+P + ++ +R + K +D + E ++ + Sbjct: 155 NVVRVEMNVQYRV--TNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVI 212
Query: 437 GKAVADELEKAMSNY--GFEIVQTLIVDIVPDDTVKRAMNEINAA 565 ELE+ + Y G ++ P + VK A ++ AA Sbjct: 213 RSDTQRELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAA 257
>sp|Q58237|Y827_METJA Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii GN=MJ0827 PE=3 SV=1 Length = 199
Score = 49.7 bits (117), Expect = 1e-05 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 1/134 (0%) Frame = +2
Query: 203 LSMRVQQLDVRC-ETKTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVV 379 + MR + D+ E TKDN V V A V YR I + + A ++ + I + + Sbjct: 63 VDMRTRVTDIPPQEMITKDNAVVKVDAVVYYRVI--DVEKAILEVEDYEYAIINLAQTTL 120
Query: 380 RATVPKMNLDDVFEQKSEVGKAVADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAMNEIN 559 RA + M LD+V ++ + + + L++ +G I + + +I P + +K AM + Sbjct: 121 RAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAMAQQM 180
Query: 560 AASRMRVATQEKAE 601 A R++ A +AE Sbjct: 181 KAERLKRAAILEAE 194
>sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN=STOML2 PE=1 SV=1 Length = 356
Score = 48.9 bits (115), Expect = 2e-05 Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 1/171 (0%) Frame = +2
Query: 92 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 268 V Q + E G+F +LEPG + + L + V S++ ++V ++ T DNV + Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNILIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 269 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 448 + V Y I K A Y + +P + +R+ + K++LD VF ++ + ++ Sbjct: 100 Q-IDGVLYLRIMDPYK-ASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 157
Query: 449 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAMNEINAASRMRVATQEKAE 601 D + +A +G ++ I DI VK +M A R + AT ++E Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESE 208
>sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=STOML2 PE=2 SV=1 Length = 356
Score = 48.9 bits (115), Expect = 2e-05 Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 1/171 (0%) Frame = +2
Query: 92 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 268 V Q + E G+F +LEPG + + L + V S++ ++V ++ T DNV + Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNILIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 269 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 448 + V Y I K A Y + +P + +R+ + K++LD VF ++ + ++ Sbjct: 100 Q-IDGVLYLRIMDPYK-ASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 157
Query: 449 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAMNEINAASRMRVATQEKAE 601 D + +A +G ++ I DI VK +M A R + AT ++E Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMKMQVEAERRKRATVLESE 208
>sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus GN=Stoml2 PE=1 SV=1 Length = 353
Score = 47.8 bits (112), Expect = 4e-05 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 1/171 (0%) Frame = +2
Query: 92 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 268 V Q + E G+F +LEPG + + L + V S++ ++V ++ T DNV + Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNVLIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 269 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 448 + V Y I K A Y + +P + +R+ + K++LD VF ++ + + Sbjct: 100 Q-IDGVLYLRIMDPYK-ASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANI 157
Query: 449 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAMNEINAASRMRVATQEKAE 601 D + +A +G ++ I DI VK +M A R + AT ++E Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESE 208
>sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN=Stoml2 PE=1 SV=1 Length = 353
Score = 47.8 bits (112), Expect = 4e-05 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 1/171 (0%) Frame = +2
Query: 92 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 268 V Q + E G+F +LEPG + + L + V S++ ++V ++ T DNV + Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNVLIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 269 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 448 + V Y I K A Y + +P + +R+ + K++LD VF ++ + + Sbjct: 100 Q-IDGVLYLRIMDPYK-ASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANI 157
Query: 449 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAMNEINAASRMRVATQEKAE 601 D + +A +G ++ I DI VK +M A R + AT ++E Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESE 208
>sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizosaccharomyces pombe GN=SPBC16G5.07c PE=2 SV=1 Length = 354
Score = 47.4 bits (111), Expect = 6e-05 Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 1/165 (0%) Frame = +2
Query: 92 VDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETK-TKDNVFV 268 V Q + E G+F +L PG + + + + S++ + L++ ++ T DNV + Sbjct: 56 VPQQVAYVVERMGRFSRILTPGVAFLAPIIDK-IAYIHSLKERALEIPTQSAITLDNVSL 114
Query: 269 NVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQKSEVGKAV 448 + V Y + K A Y + + I +R+ + ++ LD V ++ + + Sbjct: 115 G-LDGVLYIQVYDPYK-ASYGVEDADYAISQLAQTTMRSEIGRLTLDHVLRERQSLNIHI 172
Query: 449 ADELEKAMSNYGFEIVQTLIVDIVPDDTVKRAMNEINAASRMRVA 583 D + KA ++G ++ I DI P ++V AM++ +A R + A Sbjct: 173 TDAINKAAESWGIRCLRHEIRDIRPPESVVMAMHQQVSAERQKRA 217
>sp|Q8K914|HFLK_BUCAP Protein hflK OS=Buchnera aphidicola subsp. Schizaphis graminum GN=hflK PE=3 SV=1 Length = 411
Score = 47.4 bits (111), Expect = 6e-05 Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 3/177 (1%) Frame = +2
Query: 80 GCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCETKTKDN 259 G + ++ + FGKF H++ PG + P + V V V++L T D Sbjct: 87 GFYTIKEAERGVVTTFGKFSHLVAPGLNWRPVFINE-VKAVNVETVRELATSGVMLTSDE 145
Query: 260 VFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVF-EQKSEV 436 V V +VQY+ T+ D + + P + ++ +R + N+D V E ++ + Sbjct: 146 NVVRVEMNVQYKI--TDPADYLFSVAYPDDSLRQATDSALRGVIGHSNMDRVLTEGRTLI 203
Query: 437 GKAVADELEKAMSNY--GFEIVQTLIVDIVPDDTVKRAMNEINAASRMRVATQEKAE 601 E+E+ + Y G I+ P + VK A ++ AA R +AE Sbjct: 204 RSDTQKEIEETIKPYKLGITILDVNFQTARPPEEVKEAFDDAIAARENREQYIREAE 260
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q94JS7 |
Definition |
tr|Q94JS7|Q94JS7_ORYSA Hypersensitive-induced response protein OS=Oryza sativa |
Align length |
179 |
Score (bit) |
289.0 |
E-value |
8.0e-77 |
Report |
|