DK962939 |
Clone id |
TST39A01NGRL0015_D05 |
Library |
TST39 |
Length |
637 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_D05. 5' end sequence. |
Accession |
DK962939 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL42Contig1 |
Sequence |
GCTCTTCTGACCGTTTAGGGTTTCGCTACTGCTGTTAGGGTTTCTCCACGTGCCATCGTG ATTTAGTTCGAGCTACCGTAATTCGGTCTTGTAGATCACTACAGAATTTCCGTATCGACG CGAGGTTTTGGGACACAGCAGATCTCTCTCGTTCTACTTCAGATCTGTGTCCAGGAGCTA AGCGAGCTCAGGATTGATGGAGAATATTTATTCTTTCTGGAGTCTAAATGACAATAATCG GCGCTCTCCCACTGAGATGCAAGAGGATCAAAGCTGGAAAGTAGCAGCTACCAAGCTTGC TTTTGCGGATCAGATGAGGCTGAAGTTTGATAGGTCTAGATCTGATGCGAAGGTTGTGGC CCCTCATGAGAAGAACATTAAACAAGCAAAGGGACGATCCAAGGGCAGAGCTGAAGACAT GCTGAAGGGGGAAGGTTTCAACCAGAAGTTTTCGGATGGGGATTTGAGATATGGAGATTT GGGTCAGAAGCTTGGAGCAGGTAACATGTCAACATCACAGATTGTTGGCAGTGCAGATAA ACGATTCAAGTCTCTTCCGCCTGCTGAAACACTTCCTAGACACGAAACTTTGGGTGGCTA CATATTTGTCTGCAACAATGATACCATGGCTGAGGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37707 |
Definition |
sp|P37707|B2_DAUCA B2 protein OS=Daucus carota |
Align length |
47 |
Score (bit) |
67.4 |
E-value |
6.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQZ7 |
Definition |
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
168 |
Score (bit) |
97.4 |
E-value |
6.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962939|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_D05, 5' (637 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea... 97 6e-19 tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 85 4e-15 tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 83 2e-14 tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 82 4e-14 tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 81 5e-14 tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/... 77 1e-12 tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana P... 77 1e-12 tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Popul... 70 1e-10 tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella paten... 69 2e-10 tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 69 2e-10 tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella paten... 69 2e-10 tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea m... 68 5e-10 tr|Q8L6E9|Q8L6E9_PEA GDA2 protein OS=Pisum sativum GN=gda2 PE=2 ... 67 1e-09 tr|Q9FHX9|Q9FHX9_ARATH Arabidopsis thaliana genomic DNA, chromos... 66 2e-09 tr|Q8RXN8|Q8RXN8_ARATH Putative uncharacterized protein At5g4205... 66 2e-09 tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09 tr|Q5JZR1|Q5JZR1_SOYBN N-rich protein OS=Glycine max GN=nrp PE=2... 65 5e-09 tr|A9REG4|A9REG4_PHYPA Predicted protein OS=Physcomitrella paten... 65 5e-09 tr|Q6L4U7|Q6L4U7_ORYSJ Os05g0498700 protein OS=Oryza sativa subs... 64 6e-09 tr|B8AZL0|B8AZL0_ORYSI Putative uncharacterized protein OS=Oryza... 64 6e-09 tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 64 6e-09 tr|A3B5I3|A3B5I3_ORYSJ Putative uncharacterized protein OS=Oryza... 64 6e-09 tr|Q5JK83|Q5JK83_ORYSJ cDNA clone:001-207-H09, full insert seque... 60 1e-07 tr|Q5JK82|Q5JK82_ORYSJ Putative GDA2 protein (Os01g0550300 prote... 60 1e-07 tr|B8AA12|B8AA12_ORYSI Putative uncharacterized protein OS=Oryza... 60 1e-07 tr|A2ZU93|A2ZU93_ORYSJ Putative uncharacterized protein OS=Oryza... 60 1e-07 tr|A7Q7R8|A7Q7R8_VITVI Chromosome chr18 scaffold_61, whole genom... 59 3e-07 tr|A5AK97|A5AK97_VITVI Putative uncharacterized protein OS=Vitis... 59 3e-07 tr|B6TMX1|B6TMX1_MAIZE N-rich protein OS=Zea mays PE=2 SV=1 58 4e-07 tr|B7ZZ36|B7ZZ36_MAIZE Putative uncharacterized protein OS=Zea m... 57 7e-07
>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 97.4 bits (241), Expect = 6e-19 Identities = 64/168 (38%), Positives = 83/168 (49%), Gaps = 21/168 (12%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376 M N YSFW + R +D W +AA++LA A+ R K DR+ +P E Sbjct: 1 MANPYSFWQFGEE-LRGQARASDDHKWTLAASQLALAEHKRSKGDRTNRSEPTESPSEA- 58
Query: 377 IKQAKGRSKGRAE-DMLKGEGFNQKFSDGDLRYGDLGQKLGA------------------ 499 + KG+ KG++E L+ N K + D + GD G K GA Sbjct: 59 --KQKGKYKGKSEVSKLEALTLNLKQMNLDWKPGDAGVKGGALNDIYNASTPYHNNNSGN 116
Query: 500 --GNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAED 637 N + S + DKRFK+LP E LPR+E LGGYIFVCNNDTM ED Sbjct: 117 NNNNNNGSNNNNAYDKRFKTLPSTEMLPRNEILGGYIFVCNNDTMQED 164
>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 84.7 bits (208), Expect = 4e-15 Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 14/161 (8%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376 M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55
Query: 377 IKQAKGRSKGRAEDMLKGEGFNQ--KFSDGDLRYG------DLGQKLGAGNMSTSQIVG- 529 +K G+S G+ E++ + FN K ++ + G ++ + N +TS Sbjct: 56 VKHRGGKSNGKLEEVNDNQ-FNLIWKPAEAGTKVGIVHGGYNINHVINYNNNNTSSNGNN 114
Query: 530 -----SADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAED 637 S +KRFK+LP +E LPR+E LGGYIFVCNNDTM ED Sbjct: 115 NYNNNSFEKRFKTLPSSEMLPRNEILGGYIFVCNNDTMQED 155
>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 82.8 bits (203), Expect = 2e-14 Identities = 64/186 (34%), Positives = 84/186 (45%), Gaps = 39/186 (20%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376 M+N++SFW L D R ++ ED W + A+KLA + R K +R + P E Sbjct: 1 MDNMHSFWQLGDE-LRGHSKASEDHKWLMVASKLA---EQRSKAERFNNLDLSKGPLETR 56
Query: 377 IKQAKGRSKGRAEDMLK------GEGFNQKFSDGDLRYGDLG-----QKLG---AGNMST 514 + G + D L F + S LR G QK AGNM++ Sbjct: 57 PRDKFGFQEENKFDTLNLSMLNLDSKFTENMSKSSLRNGVYNMNAVYQKSNVNFAGNMNS 116
Query: 515 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 619 ++ G+ DKRFK+LP AETLPR+E LGGYIFVCNN Sbjct: 117 NKYSGNVQLNKDPHNNNSNNNNNNNENNSNATDKRFKTLPAAETLPRNEVLGGYIFVCNN 176
Query: 620 DTMAED 637 DTM ED Sbjct: 177 DTMQED 182
>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 298
Score = 81.6 bits (200), Expect = 4e-14 Identities = 60/184 (32%), Positives = 82/184 (44%), Gaps = 37/184 (20%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKVVAP 364 MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A++ P Sbjct: 1 MENMQSYWQFGDE-LRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAEI-RP 58
Query: 365 HEKNI-------------------KQAKGRSKGRAEDMLK--------------GEGFNQ 445 ++ K + SK R D + G Sbjct: 59 RGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIYNANPVYLNPNFNSLGNSSLS 118
Query: 446 KFSDGDLRYGDLGQKLGAGNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 625 KF+ + Y K N+ ++ S DKRFK+LP AETLP++E LGGYIFVCNNDT Sbjct: 119 KFNASN--YTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAETLPKNEVLGGYIFVCNNDT 176
Query: 626 MAED 637 M ED Sbjct: 177 MQED 180
>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus paradisi PE=2 SV=1 Length = 305
Score = 81.3 bits (199), Expect = 5e-14 Identities = 67/199 (33%), Positives = 87/199 (43%), Gaps = 52/199 (26%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376 M+N++SFW L D R + EDQSW AA++LA +Q R K +R N Sbjct: 1 MDNMHSFWQLGDE-LRGQSRTSEDQSWLRAASRLA--EQTRFKGERMN-----------N 46
Query: 377 IKQAKGRSKGRAEDML------KGEGFNQKFS-------------DGDLRYG-------- 475 + +KG ++ R D + E FN F+ LR G Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFNMMNLDNKVVENVTKSSLRNGIYNMNAVY 106
Query: 476 ------DLGQ----KLGAGNMST---------------SQIVGSADKRFKSLPPAETLPR 580 ++G K G N+S S + DKRFK+LP ETLPR Sbjct: 107 QKNSGHNMGNLMVNKYGGNNLSVKEAENNNNNNNNNNDSNANSALDKRFKTLPATETLPR 166
Query: 581 HETLGGYIFVCNNDTMAED 637 +E LGGYIFVCNNDTM ED Sbjct: 167 NEVLGGYIFVCNNDTMQED 185
>tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/MOJ10_18) OS=Arabidopsis thaliana GN=At3g27090 PE=2 SV=1 Length = 296
Score = 76.6 bits (187), Expect = 1e-12 Identities = 59/186 (31%), Positives = 78/186 (41%), Gaps = 44/186 (23%) Frame = +2
Query: 212 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 358 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 359 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 514 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 515 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 619 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNVVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 620 DTMAED 637 DTM ED Sbjct: 172 DTMQED 177
>tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 296
Score = 76.6 bits (187), Expect = 1e-12 Identities = 59/186 (31%), Positives = 78/186 (41%), Gaps = 44/186 (23%) Frame = +2
Query: 212 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 358 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 359 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 514 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 515 SQIVGS-------------------------ADKRFKSLPPAETLPRHETLGGYIFVCNN 619 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNIVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 620 DTMAED 637 DTM ED Sbjct: 172 DTMQED 177
>tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 390
Score = 70.1 bits (170), Expect = 1e-10 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 7/61 (11%) Frame = +2
Query: 476 DLGQKLGAGNMS-------TSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAE 634 D G K G N + + +ADKRFK+LPP+E+LPR+ET+GGYIFVCNNDTMAE Sbjct: 212 DFGSKSGKKNSNKKSNSNDNNDNKSAADKRFKTLPPSESLPRYETIGGYIFVCNNDTMAE 271
Query: 635 D 637 + Sbjct: 272 N 272
>tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113222 PE=4 SV=1 Length = 174
Score = 69.3 bits (168), Expect = 2e-10 Identities = 32/40 (80%), Positives = 34/40 (85%) Frame = +2
Query: 518 QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAED 637 QI + DKRFKSLPPAE LPR+ TLGGYIFVCNNDTM ED Sbjct: 12 QITVNPDKRFKSLPPAEILPRNTTLGGYIFVCNNDTMQED 51
>tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 Length = 301
Score = 68.9 bits (167), Expect = 2e-10 Identities = 56/182 (30%), Positives = 77/182 (42%), Gaps = 40/182 (21%) Frame = +2
Query: 212 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAF-----ADQMRLKFDRSRSDAKVVAPHEKN 376 S W L D R P ++ ED+ W + +KLA ++M D + D H+ + Sbjct: 3 SLWHLGDELRGQP-KVVEDRQWSLMTSKLAEITRSKGERMNTVPDAKQWDKTSYQLHDDS 61
Query: 377 ---------------IKQA-------KGRSKGRAEDMLKGEGFNQKFSDGDLRYG----- 475 + +A +G + LKG N + + G Sbjct: 62 RMGHINLGLMNLDLKMNEAAAMKLPFRGMPYNMNQMYLKGSNANSNVNAFKMNVGVNKYS 121
Query: 476 ------DLGQKLGAGNMSTSQIVGS--ADKRFKSLPPAETLPRHETLGGYIFVCNNDTMA 631 D K GN + G+ ADKRFK+LP +E LPR+E LGGYIFVCNNDTM Sbjct: 122 NSPNGKDANGKNNGGNNNNGSANGTSVADKRFKTLPTSEMLPRNEVLGGYIFVCNNDTMQ 181
Query: 632 ED 637 ED Sbjct: 182 ED 183
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