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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962941
Clone id TST39A01NGRL0015_D07
Library
Length 325
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_D07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GATTGCCATCAACCTTGATCTGAGGAGGGGTGGAAACAAGCGCTACCAGAAGACTGCAGC
CTATGGTCATTTCGGGCGGGATGATGCTGACTTCACATGGGAGACAGTGAAGCCCCTCAA
GTTTGAGAAGGCTTAGGCCAAAGTTTTGTGGTAGTTGCCTGCTGGAAAAGTTTTGGTATG
AGGTTTTGGGTCAACTGATGGGATCTTTTTTATTCTAATACCTTGGACATGACATTTTTT
GTGTTCAGCTCGATATTTGATGTTTGATCACTACCTTAAAGTTTTGCTTTATATTGGAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9FVG7
Definition sp|Q9FVG7|METK2_PINCO S-adenosylmethionine synthetase 2 OS=Pinus contorta
Align length 44
Score (bit) 85.1
E-value 1.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962941|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_D07, 5'
         (297 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FVG7|METK2_PINCO S-adenosylmethionine synthetase 2 OS=Pinus...    85   1e-16
sp|Q9FPL6|METK2_SUASA S-adenosylmethionine synthetase 2 OS=Suaed...    84   2e-16
sp|A9NYY0|METK2_PICSI S-adenosylmethionine synthetase 2 OS=Picea...    84   2e-16
sp|P50300|METK_PINBN S-adenosylmethionine synthetase OS=Pinus ba...    84   3e-16
sp|Q56TU3|METK2_DAUCA S-adenosylmethionine synthetase 2 OS=Daucu...    83   4e-16
sp|A7Q0V4|METK5_VITVI S-adenosylmethionine synthetase 5 OS=Vitis...    82   8e-16
sp|Q96552|METK2_CATRO S-adenosylmethionine synthetase 2 OS=Catha...    82   1e-15
sp|A9P2P4|METK3_PICSI S-adenosylmethionine synthetase 3 OS=Picea...    81   1e-15
sp|Q9SBQ7|METK3_PETHY S-adenosylmethionine synthetase 3 OS=Petun...    81   1e-15
sp|A7PRJ6|METK4_VITVI S-adenosylmethionine synthetase 4 OS=Vitis...    81   2e-15
sp|Q4H1G3|METK2_BETVU S-adenosylmethionine synthetase 2 OS=Beta ...    81   2e-15
sp|A9NUH8|METK1_PICSI S-adenosylmethionine synthetase 1 OS=Picea...    81   2e-15
sp|A7L2Z6|METK_GOSHI S-adenosylmethionine synthetase OS=Gossypiu...    80   2e-15
sp|P50303|METK3_ACTCH S-adenosylmethionine synthetase 3 (Fragmen...    80   2e-15
sp|Q8W3Y4|METK_PHALU S-adenosylmethionine synthetase OS=Phaseolu...    80   3e-15
sp|Q96551|METK1_CATRO S-adenosylmethionine synthetase 1 OS=Catha...    80   3e-15
sp|A4PU48|METK_MEDTR S-adenosylmethionine synthetase OS=Medicago...    80   4e-15
sp|P43280|METK1_SOLLC S-adenosylmethionine synthetase 1 OS=Solan...    80   4e-15
sp|A7NVX9|METK2_VITVI S-adenosylmethionine synthetase 2 OS=Vitis...    79   5e-15
sp|P31156|METK2_PETCR S-adenosylmethionine synthetase 2 (Fragmen...    79   5e-15
sp|P17562|METK2_ARATH S-adenosylmethionine synthetase 2 OS=Arabi...    79   5e-15
sp|P31155|METK1_PETCR S-adenosylmethionine synthetase 1 (Fragmen...    79   5e-15
sp|Q56TU4|METK1_DAUCA S-adenosylmethionine synthetase 1 OS=Daucu...    79   5e-15
sp|Q9AT55|METK2_ELAUM S-adenosylmethionine synthetase 2 OS=Elaea...    79   7e-15
sp|Q0DKY4|METK1_ORYSJ S-adenosylmethionine synthetase 1 OS=Oryza...    79   7e-15
sp|A2Y053|METK1_ORYSI S-adenosylmethionine synthetase 1 OS=Oryza...    79   7e-15
sp|A7PQS0|METK1_VITVI S-adenosylmethionine synthetase 1 OS=Vitis...    79   9e-15
sp|P50301|METK1_ACTCH S-adenosylmethionine synthetase 1 OS=Actin...    79   9e-15
sp|Q6GV10|METK_SOLBR S-adenosylmethionine synthetase OS=Solanum ...    78   1e-14
sp|A9PHC5|METK4_POPTR S-adenosylmethionine synthetase 4 OS=Popul...    78   1e-14

>sp|Q9FVG7|METK2_PINCO S-adenosylmethionine synthetase 2 OS=Pinus
           contorta GN=SAMS2 PE=2 SV=1
          Length = 393

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK+EKA
Sbjct: 348 ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKA 391


>sp|Q9FPL6|METK2_SUASA S-adenosylmethionine synthetase 2 OS=Suaeda
           salsa GN=METK2 PE=2 SV=1
          Length = 395

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 37/43 (86%), Positives = 41/43 (95%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEK 130
           I+INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK+EK
Sbjct: 348 ISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEK 390


>sp|A9NYY0|METK2_PICSI S-adenosylmethionine synthetase 2 OS=Picea
           sitchensis GN=METK2 PE=2 SV=1
          Length = 393

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 37/44 (84%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK++KA
Sbjct: 348 ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWDKA 391


>sp|P50300|METK_PINBN S-adenosylmethionine synthetase OS=Pinus
           banksiana GN=METK PE=2 SV=1
          Length = 393

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I+INLDL+RGGN R QKTAAYGHFGRDD DFTWETVKPLK+EKA
Sbjct: 348 ISINLDLKRGGNGRSQKTAAYGHFGRDDPDFTWETVKPLKWEKA 391


>sp|Q56TU3|METK2_DAUCA S-adenosylmethionine synthetase 2 OS=Daucus
           carota GN=SAMS2 PE=2 SV=1
          Length = 393

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEK 130
           IAINLDL+RGGN R+ KTAAYGHFGRDDADFTWE VKPLK+EK
Sbjct: 348 IAINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKWEK 390


>sp|A7Q0V4|METK5_VITVI S-adenosylmethionine synthetase 5 OS=Vitis
           vinifera GN=METK5 PE=3 SV=1
          Length = 391

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           IAINLDL+RGGN R+ KTAAYGHFGRDD DFTWE VKPLK+EKA
Sbjct: 348 IAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKA 391


>sp|Q96552|METK2_CATRO S-adenosylmethionine synthetase 2
           OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1
          Length = 393

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEK 130
           IAINLDL+RGGN R+ KTAAYGHFGR+D DFTWE VKPLKFEK
Sbjct: 348 IAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKFEK 390


>sp|A9P2P4|METK3_PICSI S-adenosylmethionine synthetase 3 OS=Picea
           sitchensis GN=METK3 PE=2 SV=1
          Length = 394

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWE VKPLK EKA
Sbjct: 348 ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEIVKPLKQEKA 391


>sp|Q9SBQ7|METK3_PETHY S-adenosylmethionine synthetase 3 OS=Petunia
           hybrida GN=SAM3 PE=2 SV=1
          Length = 393

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           IAINLDL+RGGN R+ KTAAYGHFGRDD DFTWE VKPLK EKA
Sbjct: 348 IAINLDLKRGGNGRFLKTAAYGHFGRDDTDFTWEVVKPLKCEKA 391


>sp|A7PRJ6|METK4_VITVI S-adenosylmethionine synthetase 4 OS=Vitis
           vinifera GN=METK4 PE=3 SV=1
          Length = 393

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           IAINLDL+RGGN R+ KTAAYGHFGRDD DFTWE VKPLK EKA
Sbjct: 348 IAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKAEKA 391
tr_hit_id Q5UN16
Definition tr|Q5UN16|Q5UN16_PINTA S-adenosyl methionine synthetase 2 (Fragment) OS=Pinus taeda
Align length 44
Score (bit) 85.1
E-value 2.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962941|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_D07, 5'
         (297 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5UN16|Q5UN16_PINTA S-adenosyl methionine synthetase 2 (Fragm...    85   2e-15
tr|Q5EK82|Q5EK82_PINTA S-adenosyl methionine synthetase 2 (Fragm...    85   2e-15
tr|B0ZRG4|B0ZRG4_PINEL S-adenosyl methionine synthase protein 2 ...    85   2e-15
tr|B0ZRG3|B0ZRG3_PINSY S-adenosyl methionine synthase protein 2 ...    85   2e-15
tr|B0ZRG2|B0ZRG2_PINSY S-adenosyl methionine synthase protein 2 ...    85   2e-15
tr|B0ZRG0|B0ZRG0_PINRA S-adenosyl methionine synthase protein 2 ...    85   2e-15
tr|B8LNX2|B8LNX2_PICSI Putative uncharacterized protein OS=Picea...    84   3e-15
tr|Q9SAN9|Q9SAN9_CATRO Methionine adenosyltransferase (Fragment)...    82   2e-14
tr|B8LFH4|B8LFH4_IPOBA S-adenosyl-L-methionine synthetase OS=Ipo...    80   5e-14
tr|A9TJH4|A9TJH4_PHYPA S-adenosylmethionine synthetase OS=Physco...    80   5e-14
tr|A9TJG9|A9TJG9_PHYPA S-adenosylmethionine synthetase OS=Physco...    80   5e-14
tr|Q6J9X6|Q6J9X6_MEDSA S-adenosylmethionine synthetase (Fragment...    80   7e-14
tr|Q1H997|Q1H997_ORYRU S-adenosylmethionine synthetase (Fragment...    80   7e-14
tr|Q1H9D3|Q1H9D3_ORYSA S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9D0|Q1H9D0_ORYSA S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9C8|Q1H9C8_ORYSA S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9C4|Q1H9C4_ORYSA S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9C0|Q1H9C0_ORYSA S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9B9|Q1H9B9_ORYSA S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9B6|Q1H9B6_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9B3|Q1H9B3_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9A4|Q1H9A4_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H9A2|Q1H9A2_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H994|Q1H994_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H993|Q1H993_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H992|Q1H992_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H990|Q1H990_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H989|Q1H989_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H981|Q1H981_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13
tr|Q1H977|Q1H977_ORYRU S-adenosylmethionine synthetase (Fragment...    79   1e-13

>tr|Q5UN16|Q5UN16_PINTA S-adenosyl methionine synthetase 2
           (Fragment) OS=Pinus taeda PE=3 SV=1
          Length = 102

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK+EKA
Sbjct: 57  ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKA 100


>tr|Q5EK82|Q5EK82_PINTA S-adenosyl methionine synthetase 2
           (Fragment) OS=Pinus taeda GN=sams-2 PE=3 SV=1
          Length = 115

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK+EKA
Sbjct: 70  ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKA 113


>tr|B0ZRG4|B0ZRG4_PINEL S-adenosyl methionine synthase protein 2
           (Fragment) OS=Pinus elliottii GN=SAMS2 PE=3 SV=1
          Length = 111

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK+EKA
Sbjct: 66  ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKA 109


>tr|B0ZRG3|B0ZRG3_PINSY S-adenosyl methionine synthase protein 2
           (Fragment) OS=Pinus sylvestris GN=SAMS2 PE=3 SV=1
          Length = 111

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK+EKA
Sbjct: 66  ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKA 109


>tr|B0ZRG2|B0ZRG2_PINSY S-adenosyl methionine synthase protein 2
           (Fragment) OS=Pinus sylvestris GN=SAMS2 PE=3 SV=1
          Length = 111

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK+EKA
Sbjct: 66  ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKA 109


>tr|B0ZRG0|B0ZRG0_PINRA S-adenosyl methionine synthase protein 2
           (Fragment) OS=Pinus radiata GN=SAMS2 PE=3 SV=1
          Length = 111

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK+EKA
Sbjct: 66  ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKA 109


>tr|B8LNX2|B8LNX2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 84.0 bits (206), Expect = 3e-15
 Identities = 37/44 (84%), Positives = 41/44 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEKA 133
           I INLDL+RGGN R+QKTAAYGHFGRDD DFTWETVKPLK++KA
Sbjct: 348 ITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWDKA 391


>tr|Q9SAN9|Q9SAN9_CATRO Methionine adenosyltransferase (Fragment)
           OS=Catharanthus roseus GN=SAM1 PE=2 SV=1
          Length = 115

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEK 130
           IAINLDL+RGGN R+ KTAAYGHFGR+D DFTWE VKPLKFEK
Sbjct: 70  IAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKFEK 112


>tr|B8LFH4|B8LFH4_IPOBA S-adenosyl-L-methionine synthetase
           OS=Ipomoea batatas PE=2 SV=1
          Length = 393

 Score = 80.1 bits (196), Expect = 5e-14
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEK 130
           IAINLDL+RGGN R+ KTAAYGHFGRDD DFTWE VKPLK++K
Sbjct: 348 IAINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWDK 390


>tr|A9TJH4|A9TJH4_PHYPA S-adenosylmethionine synthetase
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146516 PE=3 SV=1
          Length = 392

 Score = 80.1 bits (196), Expect = 5e-14
 Identities = 34/43 (79%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   IAINLDLRRGGNKRYQKTAAYGHFGRDDADFTWETVKPLKFEK 130
           + INLDL+RGGN+R+QKTAAYGHFGR+D DFTWE VKPLK+EK
Sbjct: 347 MCINLDLKRGGNRRFQKTAAYGHFGRNDPDFTWEVVKPLKWEK 389