DK962946
Clone id TST39A01NGRL0015_D12
Library
Length 782
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_D12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCATTATGGAGAAAGAGTCAATGGGCATCATAGAAGTGTAAGTGTGGGTAGCGGTTTGAA
TGCGTGGAAGAGTGGTTCAATGACTGATGGCAGAGGTAATCGACGGAGACTCATATCTGT
TCAGATCCCCTCCAACAGGTTAAATTTCTGGGCCATTTTTTCCAAAGTACGCCATGCAAG
GAAATTCAAAAGTGGCCTGAAAAGATGGAAAGATGGAGATACCAATCCAAGGGACAGTGA
GATGCTTTCATTATTGCAGGGAATACAAGACATTGAGCAGGGAAATCAAACTTCTTGTTT
TGGAGCAAAACCAGATTGCTTAAGCAGAAGTGCCTTTGGCGATCTTCCCAACGGAGACAA
GAAGCACCACAGAACATTGGGTGAGGGGCTGCAGATTTGGCCGCGCACACAGTATTCTCT
ACCATCTAGTCGGCTTGTACAAATAGCCTCTGCCATTCTTGTGGCTTTAGGGCTTGTAGG
ACTTCTATCCTTCCATGTGACATCATCATCCTTGTAAAAGGCACTCAAAGAGCTTGCCAG
GTGGAAAGCGGCATTTTAATGGTTCTCACTGGATGCGTCTTGGTCACTGTAGAAGGAGGA
TGCTTTCTACCCCATTGATAATTGCAAGTCTCATATGCTGATACTTTTTGTCTGGATGCC
ATTGTAATGTTTTTCGACGCCCTTGCGCCTACACTTTTCAGGTTGGGCGGGGTCTTTACA
AAAAGCTAATAACCCATTTTTTCTCAATGAATTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962946|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_D12, 5'
(753 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B8LQV3
Definition tr|B8LQV3|B8LQV3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 73
Score (bit) 52.8
E-value 2.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962946|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_D12, 5'
(753 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LQV3|B8LQV3_PICSI Putative uncharacterized protein OS=Picea... 53 2e-05
tr|Q6PEW6|Q6PEW6_HUMAN FRMD4B protein (Fragment) OS=Homo sapiens... 38 0.63
tr|Q22W77|Q22W77_TETTH EGF-like domain containing protein OS=Tet... 35 5.4
tr|A6KXX7|A6KXX7_BACV8 Arylsulfate sulfotransferase OS=Bacteroid... 34 9.1
tr|A5C7Q2|A5C7Q2_VITVI Putative uncharacterized protein OS=Vitis... 34 9.2

>tr|B8LQV3|B8LQV3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 426

Score = 52.8 bits (125), Expect = 2e-05
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +2

Query: 11 ERVNGHHRSVSVGSGLNAWKSGSMTDGRGNRRRLISVQIPSNRLNFWAIFSKVRHARKF- 187
ER GH RS S G+ AWK + G R + N LNFW S ++ K
Sbjct: 259 ERATGHKRSASAGAEFRAWKIVIADNDIGKRSYDSRCENFDNGLNFWGYISNLKFMPKLN 318

Query: 188 --KSGLKRWKDGD 220
KSG+KRWKDG+
Sbjct: 319 FSKSGMKRWKDGE 331


>tr|Q6PEW6|Q6PEW6_HUMAN FRMD4B protein (Fragment) OS=Homo sapiens
GN=FRMD4B PE=2 SV=1
Length = 307

Score = 38.1 bits (87), Expect = 0.63
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = -2

Query: 488 IEVLQALKPQEWQRLFVQAD*MVENTVCAAKSAAPHPMFCGASCLRWEDRQRHFCLSNLV 309
IE + LK + LF + C K AP MF G W+DR++ FCLS+ +
Sbjct: 247 IESISFLKDKTTVELF-----FLNAKACVHKVGAPFVMFTGCLQSDWDDRKKWFCLSSCI 301

Query: 308 LLQNKK 291
+ KK
Sbjct: 302 QTKKKK 307


>tr|Q22W77|Q22W77_TETTH EGF-like domain containing protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00160550 PE=4
SV=1
Length = 2328

Score = 35.0 bits (79), Expect = 5.4
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1

Query: 378 NVLWCFLSPLGRSPKALLLKQSGFAPKQEV*FPCSMSCIPCNNES 244
N+++CFL S + LKQ+ ++ + ++ PCS +C+ C N S
Sbjct: 1125 NLIYCFL--FFYSKQKQFLKQNSYSDQNQICQPCSTNCLTCRNNS 1167


>tr|A6KXX7|A6KXX7_BACV8 Arylsulfate sulfotransferase OS=Bacteroides
vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)
GN=BVU_0583 PE=4 SV=1
Length = 599

Score = 34.3 bits (77), Expect = 9.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2

Query: 29 HRSVSVGSGLNAWKSGSMTDGRGNRRRLISVQIPSNRLNFWAIFSK 166
HR + +G GL ++G G GN R++ V + N ++ W + +
Sbjct: 258 HRYIGIGCGLIRMQNGHYMTGDGNHHRMVEVDMMGNTIHNWDMLER 303


>tr|A5C7Q2|A5C7Q2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_042917 PE=4 SV=1
Length = 369

Score = 34.3 bits (77), Expect = 9.2
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1

Query: 496 CDIIILVKGTQRACQVESGILMVLTGCVLVTVEGGCFL 609
C +I+ V+G+ VE G+L+ + GC+ V+VEGG F+
Sbjct: 193 CGLIVSVEGSLHL-SVEGGLLISVKGCLPVSVEGGLFV 229