DK962953
Clone id TST39A01NGRL0015_D19
Library
Length 663
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_D19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CGATCTCTCACTCGACGCACACTCTCATCAAAAGCGCACTCTCTAGTGTACTTGTGAGTG
TGCAGAGCTAAGTTGGCTTTACACACATACGCGCGCGCACACACCCAAACCCGTGCATTG
CCTCCCTCAGCGTCTCCCTGCCTGTGGCCGCCATGGCTCAATCTGCCCTTCTCTCCCGCT
CCTCAGCGCTCGCTTCCTCCTTCGCCAATTTCCAGGCAGGCTCCCGTATTGCAGCGTCGC
AGGCCGGCGGCCTCTCCTTCGCTCCCCTGCATTCCTCCAGGGTTTTCCAGTCCTCTCCCT
TGAAGACAGTTGCCCTCTTTGGCACCAAGACTCCCAAGAAGACAACTGGGTCCAAGCCTG
CCCCAAAGACGAAGGGAAAGGTTGAGGATGGCATTTTCGGGACCTCCGGTGGAATTGGCT
TCACCAAGCAAAACGAGCTCTTTGTTGGCCGAGTCGCCATGCTTGGGTTTGCGGCCTCTA
TTCTAGGTGAGGCCATCACAGGAAAGGGAACTCTTGCTCAATTCGACTTCGAGACAGGGT
TGCCACTAACTGAGACAGAGCCCCTTCTCCTCTTCTTCATTTTGTTTACATTGCTGGGTG
CTATTGGAGCTCTTGGTGACCGAGGAAAGTTTGTGGATGATCCTGCCGAGCCCACTGGGC
TTG
■■Homology search results ■■ -
sp_hit_id P54773
Definition sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum
Align length 94
Score (bit) 90.9
E-value 5.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962953|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_D19, 5'
(663 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti... 91 5e-18
sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti... 89 2e-17
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti... 88 5e-17
sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti... 86 2e-16
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti... 83 1e-15
sp|P51532|SMCA4_HUMAN Probable global transcription activator SN... 37 0.12
sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=... 36 0.21
sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens GN=... 36 0.21
sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophor... 35 0.27
sp|Q9Z0G8|WIPF3_RAT WAS/WASL-interacting protein family member 3... 35 0.27
sp|Q08DG7|HXA3_BOVIN Homeobox protein Hox-A3 OS=Bos taurus GN=HO... 35 0.27
sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member... 35 0.36
sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp.... 35 0.46
sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VR... 34 0.60
sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Ho... 34 0.61
sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Ara... 34 0.61
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 OS=Chlamydo... 34 0.61
sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=... 34 0.61
sp|P55194|3BP1_MOUSE SH3 domain-binding protein 1 OS=Mus musculu... 34 0.61
sp|Q8TB24|RIN3_HUMAN Ras and Rab interactor 3 OS=Homo sapiens GN... 34 0.79
sp|Q3AZB7|IF2_SYNS9 Translation initiation factor IF-2 OS=Synech... 34 0.79
sp|P02831|HXA3_MOUSE Homeobox protein Hox-A3 OS=Mus musculus GN=... 34 0.79
sp|Q75E67|ELOA1_ASHGO Elongin-A OS=Ashbya gossypii GN=ELA1 PE=3 ... 34 0.79
sp|P30599|CHS2_USTMA Chitin synthase 2 OS=Ustilago maydis GN=CHS... 33 1.0
sp|P04729|GDB1_WHEAT Gamma-gliadin B-I OS=Triticum aestivum PE=2... 33 1.0
sp|Q7SAM0|BST1_NEUCR GPI inositol-deacylase OS=Neurospora crassa... 33 1.0
sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE... 33 1.3
sp|Q873A1|SEC31_NEUCR Protein transport protein sec-31 OS=Neuros... 33 1.4
sp|Q6NZN1|PPRC1_MOUSE Peroxisome proliferator-activated receptor... 33 1.4
sp|Q0D519|FH13_ORYSJ Formin-like protein 13 OS=Oryza sativa subs... 33 1.4

>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
Length = 276

Score = 90.9 bits (224), Expect = 5e-18
Identities = 51/94 (54%), Positives = 54/94 (57%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 82 VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKFVDDP PTGL
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGL 175



Score = 49.7 bits (117), Expect = 1e-05
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
Length = 274

Score = 89.0 bits (219), Expect = 2e-17
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 80 VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGAL DRGKF+DDPA PTGL
Sbjct: 140 PLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGL 173



Score = 49.7 bits (117), Expect = 1e-05
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
Length = 276

Score = 87.8 bits (216), Expect = 5e-17
Identities = 49/94 (52%), Positives = 54/94 (57%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 82 VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRG+F+DDPA TGL
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGRFIDDPAPATGL 175



Score = 49.7 bits (117), Expect = 1e-05
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
OS=Spinacia oleracea GN=PSBS PE=1 SV=1
Length = 274

Score = 85.5 bits (210), Expect = 2e-16
Identities = 58/142 (40%), Positives = 68/142 (47%)
Frame = +3

Query: 237 SQAGGLSFAPLHSSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXX 416
S L F+PL SS S+ KT+ALF VED
Sbjct: 37 SSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVEKPKLK----VEDGLFGTSGGI 92

Query: 417 XXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXX 596
K+NELFVGRVAM+GFAAS+LGE ITGKG L+Q +
Sbjct: 93 GFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLL 152

Query: 597 XAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRG+FVD+P TGL
Sbjct: 153 GAIGALGDRGRFVDEPT--TGL 172



Score = 51.6 bits (122), Expect = 4e-06
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LGFA S++GE ITGKG LAQ +
Sbjct: 200 KSNELFVGRLAQLGFAFSLIGEIITGKGALAQLN 233


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
Length = 265

Score = 83.2 bits (204), Expect = 1e-15
Identities = 49/94 (52%), Positives = 53/94 (56%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +
Sbjct: 72 VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKFVDDP PTGL
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGL 163



Score = 48.9 bits (115), Expect = 2e-05
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>sp|P51532|SMCA4_HUMAN Probable global transcription activator
SNF2L4 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647

Score = 36.6 bits (83), Expect = 0.12
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1

Query: 121 PPSASPCLWP--PWLNLPF-SPAPQRSLPPSPISRQAPVLQRRRPAASPSLP 267
PP P WP P N + PQ+ +PP P R +P PAASP +P
Sbjct: 276 PPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMP 327


>sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=1
SV=2
Length = 1374

Score = 35.8 bits (81), Expect = 0.21
Identities = 22/54 (40%), Positives = 24/54 (44%)
Frame = +1

Query: 118 LPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPSLPCIPP 279
LPP +PP P P+ Q LPP PI P Q R P P PC PP
Sbjct: 72 LPPRPDFVPFPP----PMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP--PCFPP 119


>sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens
GN=HOXA3 PE=2 SV=1
Length = 443

Score = 35.8 bits (81), Expect = 0.21
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +1

Query: 82 HTYARAHTQTRALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPS 261
H + A +T + PPS P L P P P P ++ PP+P Q P + PA +P+
Sbjct: 65 HELSEACLRTLSAPPSQPPSLGEP----PLHPPPPQAAPPAP---QPPQPAPQPPAPTPA 117

Query: 262 LPCIP 276
P P
Sbjct: 118 APPPP 122


>sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophora
paradoxa GN=ycf17 PE=3 SV=1
Length = 49

Score = 35.4 bits (80), Expect = 0.27
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3

Query: 447 GRVAMLGFAASILGEAITGKGTL 515
GR+AMLGF A++L E++TG+GTL
Sbjct: 21 GRLAMLGFIAALLTESLTGQGTL 43


>sp|Q9Z0G8|WIPF3_RAT WAS/WASL-interacting protein family member 3
OS=Rattus norvegicus GN=Wipf3 PE=1 SV=1
Length = 485

Score = 35.4 bits (80), Expect = 0.27
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Frame = +1

Query: 100 HTQTRALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVL----------QRRRPA 249
H+ R +PP S PP P P P PP P+ +P+ + P+
Sbjct: 160 HSSARPVPPRPSVPAPPPPTTPPPPPPPPPPPPPPPLPPASPIKAPSVSPPVPPTKGNPS 219

Query: 250 ASPS-LPCIPP 279
A P+ +PC+PP
Sbjct: 220 AVPAPIPCVPP 230


tr_hit_id B3RFS0
Definition tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein (Fragment) OS=Solanum nigrum
Align length 94
Score (bit) 92.4
E-value 2.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962953|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_D19, 5'
(663 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote... 92 2e-17
tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone... 91 8e-17
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone... 87 7e-16
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea... 81 3e-15
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen... 85 3e-15
tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ... 85 3e-15
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp... 84 8e-15
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp... 84 8e-15
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445... 83 1e-14
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei... 83 1e-14
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar... 83 1e-14
tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp... 82 2e-14
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque... 82 3e-14
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza... 82 3e-14
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag... 82 4e-14
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul... 80 9e-14
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome... 80 9e-14
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P... 79 2e-13
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays... 79 2e-13
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea... 79 2e-13
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar... 78 4e-13
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza... 78 4e-13
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ... 78 4e-13
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs... 78 4e-13
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza... 78 4e-13
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta... 77 7e-13
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ... 58 6e-07
tr|A8HPM2|A8HPM2_CHLRE Chloroplast photosystem II-associated 22 ... 58 6e-07
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr... 57 1e-06
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr... 57 1e-06

>tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein
(Fragment) OS=Solanum nigrum GN=PsbS PE=4 SV=1
Length = 268

Score = 92.4 bits (228), Expect = 2e-17
Identities = 52/94 (55%), Positives = 55/94 (58%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 82 VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKFVDDPA PTGL
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPAPPTGL 175



Score = 49.7 bits (117), Expect = 2e-04
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
Length = 277

Score = 90.5 bits (223), Expect = 8e-17
Identities = 50/94 (53%), Positives = 54/94 (57%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 83 VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 142

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKF+DDP PTGL
Sbjct: 143 PLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGL 176



Score = 49.7 bits (117), Expect = 2e-04
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
Length = 274

Score = 87.4 bits (215), Expect = 7e-16
Identities = 49/94 (52%), Positives = 53/94 (56%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 80 VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKF+DDP TGL
Sbjct: 140 PLLLFFILFNLLGAIGALGDRGKFIDDPVPATGL 173



Score = 49.7 bits (117), Expect = 2e-04
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 297

Score = 81.3 bits (199), Expect(2) = 3e-15
Identities = 47/94 (50%), Positives = 51/94 (54%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED K NELFVGRVAM+GFAAS+LGEAITGKG L+Q +
Sbjct: 102 VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEAITGKGILSQLNLETGIPIYEAE 161

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKFVDD TGL
Sbjct: 162 PLLLFFILFTLLGAIGALGDRGKFVDDQTPTTGL 195



Score = 23.5 bits (49), Expect(2) = 3e-15
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1

Query: 112 RALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASP 258
R PP+A+ W P LP + A + + I+R + + + AA+P
Sbjct: 39 RIRPPNAAQISWSPLTELPSANAAGLN---ARIARTEALFRPKEKAAAP 84



Score = 50.1 bits (118), Expect = 1e-04
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 223 KSNELFVGRLAQLGIAFSIIGEIITGKGALAQLN 256


>tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragment)
OS=Medicago truncatula PE=2 SV=1
Length = 262

Score = 85.1 bits (209), Expect = 3e-15
Identities = 59/138 (42%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +3

Query: 252 LSFAPLHS-SRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXK 428
+SF PL S S+ F S T+ALF VED K
Sbjct: 39 VSFNPLPSNSKCFSSRTFTTLALFKSKTKAPAKVVKKPKPK---VEDGIFGTSRGFGFTK 95

Query: 429 QNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIG 608
QNELFVGRVAM+GFAASILGEA+TGKG LAQ + AIG
Sbjct: 96 QNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIG 155

Query: 609 ALGDRGKFVDDPAEPTGL 662
ALGDRGKFVDD G+
Sbjct: 156 ALGDRGKFVDDEPNTGGV 173



Score = 50.1 bits (118), Expect = 1e-04
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LGF S++GE ITGKG LAQ +
Sbjct: 197 KSNELFVGRLAQLGFVFSLIGEIITGKGALAQLN 230


>tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein
OS=Physcomitrella patens subsp. patens GN=PSBS PE=4 SV=1
Length = 279

Score = 85.1 bits (209), Expect = 3e-15
Identities = 49/87 (56%), Positives = 50/87 (57%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED K NELFVGRVAMLGFAASILGEA+TGKGTLAQFD
Sbjct: 85 VEDGIFGTSGGIGFTKANELFVGRVAMLGFAASILGEALTGKGTLAQFDIETGIPLTETE 144

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDD 641
AIGALGDRGKFVDD
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDD 171



Score = 48.9 bits (115), Expect = 3e-04
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A +I+GE ITGKG LAQ +
Sbjct: 205 KSNELFVGRLAQLGIAFAIIGEIITGKGALAQLN 238


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
hirsutum PE=4 SV=1
Length = 278

Score = 84.0 bits (206), Expect = 8e-15
Identities = 49/94 (52%), Positives = 54/94 (57%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 85 VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKFVD+P PTG+
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGI 176



Score = 49.7 bits (117), Expect = 2e-04
Identities = 32/75 (42%), Positives = 36/75 (48%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAI 605
K NELFVGR+A LG A S++GE ITGKG LAQ + AI
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAI 263

Query: 606 GALGDRGKFVDDPAE 650
GKFV D AE
Sbjct: 264 NP--GTGKFVTDEAE 276


>tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossypium
raimondii PE=4 SV=1
Length = 278

Score = 84.0 bits (206), Expect = 8e-15
Identities = 49/94 (52%), Positives = 54/94 (57%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 85 VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKFVD+P PTG+
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGI 176



Score = 49.7 bits (117), Expect = 2e-04
Identities = 32/75 (42%), Positives = 36/75 (48%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAI 605
K NELFVGR+A LG A S++GE ITGKG LAQ + AI
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAI 263

Query: 606 GALGDRGKFVDDPAE 650
GKFV D AE
Sbjct: 264 NP--GTGKFVTDEAE 276


>tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein
(At1g44575/T18F15) OS=Arabidopsis thaliana PE=2 SV=1
Length = 265

Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/94 (52%), Positives = 53/94 (56%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +
Sbjct: 72 VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKFVDDP PTGL
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGL 163



Score = 48.9 bits (115), Expect = 3e-04
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protein
PsbS OS=Arabidopsis thaliana GN=At1g44575 PE=2 SV=1
Length = 265

Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/94 (52%), Positives = 53/94 (56%)
Frame = +3

Query: 381 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 560
VED K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +
Sbjct: 72 VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 561 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGL 662
AIGALGDRGKFVDDP PTGL
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGL 163



Score = 48.9 bits (115), Expect = 3e-04
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3

Query: 426 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 527
K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224