DK962957 |
Clone id |
TST39A01NGRL0015_D24 |
Library |
TST39 |
Length |
617 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_D24. 5' end sequence. |
Accession |
DK962957 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL112Contig1 |
Sequence |
CAATTTTGGACGTGAAGAGGGGAAGATGGCGGGTCTAAGAATTTCCCTCTCTCCGGCAGC CCCGCTTGTGGGTCGCCCAGACGGTCATGGGTCTGCCCAGTCTGCAAGGTTTCTGGGTTG CAGAGAGCTCCATTTTTTCTGGCCAGGCCAAAAAGGCAGCAGACACATCCATCACCACAA CAAAATAGTATGTGCATTGGGTGGTTCTTCTGATGAAGGATATACAGCTGTATTCCCGAG AATCTATGTGCGAGATCCACACAAAGTTTTAGGGGTTACTCGGGATGCATCCGAGGTAGA GATTCAATCAGCTCGCAACTTTCTTGCTGAACAATATGCACATCATGAACGAAGTAGGGA AGCTGTTGAGGCAGCTCATGACAAAATCATCATGGAAAGCTTCCGAGCAAGGAAAAAATC AAAAATCAATCTTAAGAGCAACCTTAAAAAGAAAGTTGAAGAATCACCTCCGTGGGTGAA AAGAATTCTGAATATTTTTGAAGTTCCACCTTCTCAAATTATACTACAGAGGGCGGCCTT TTTTGGACTTATGGGAGTGTGGAGTGATGAATCCAGCCGAGGGGGGCCCCGCATTTCAGG TGGCTGTTTCTCTAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84BU3 |
Definition |
sp|Q84BU3|DNAJ_LACAC Chaperone protein dnaJ OS=Lactobacillus acidophilus |
Align length |
55 |
Score (bit) |
35.8 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NX64 |
Definition |
tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
136 |
Score (bit) |
137.0 |
E-value |
2.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962957|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_D24, 5' (617 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea... 137 2e-34 tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella paten... 130 8e-29 tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella paten... 127 5e-28 tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella paten... 127 5e-28 tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza... 120 2e-27 tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza... 120 2e-27 tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea m... 118 1e-26 tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis... 121 3e-26 tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea may... 113 5e-25 tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum... 115 2e-24 tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza... 113 2e-24 tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor... 111 3e-23 tr|B8AKA7|B8AKA7_ORYSI Putative uncharacterized protein OS=Oryza... 96 4e-19 tr|Q0DTD2|Q0DTD2_ORYSJ Os03g0255200 protein OS=Oryza sativa subs... 96 4e-19 tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomit... 92 2e-17 tr|Q94C78|Q94C78_ARATH Putative uncharacterized protein At3g5114... 92 2e-17 tr|B6TKC3|B6TKC3_MAIZE Putative uncharacterized protein OS=Zea m... 89 5e-17 tr|Q9SD32|Q9SD32_ARATH Putative uncharacterized protein F24M12.1... 91 5e-17 tr|A8IKQ9|A8IKQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 69 3e-10 tr|A4SA03|A4SA03_OSTLU Predicted protein OS=Ostreococcus lucimar... 68 4e-10 tr|Q00SI4|Q00SI4_OSTTA Homology to unknown gene OS=Ostreococcus ... 67 8e-10 tr|Q3M3C6|Q3M3C6_ANAVT Putative uncharacterized protein OS=Anaba... 55 3e-06 tr|A0ZMC6|A0ZMC6_NODSP Putative uncharacterized protein OS=Nodul... 55 3e-06 tr|Q8YS32|Q8YS32_ANASP All3259 protein OS=Anabaena sp. (strain P... 55 3e-06 tr|B2J7N5|B2J7N5_NOSP7 Putative uncharacterized protein OS=Nosto... 55 3e-06 tr|B4FF72|B4FF72_MAIZE Putative uncharacterized protein OS=Zea m... 54 1e-05 tr|Q6H5B0|Q6H5B0_ORYSJ Os09g0380200 protein OS=Oryza sativa subs... 47 2e-05 tr|Q10Z68|Q10Z68_TRIEI Putative uncharacterized protein OS=Trich... 51 5e-05 tr|A0YNA1|A0YNA1_9CYAN Putative uncharacterized protein OS=Lyngb... 51 6e-05 tr|Q4C0P7|Q4C0P7_CROWT Putative uncharacterized protein OS=Croco... 50 8e-05
>tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 137 bits (344), Expect(2) = 2e-34 Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 3/136 (2%) Frame = +2
Query: 191 CALGGS--SDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREA 364 CA+ S G+ VFPR+ V DP+K LGV++ ASE EIQ ARNFL EQYA HERS E+ Sbjct: 66 CAMDASFGGRVGHPPVFPRVNVWDPYKRLGVSKYASEEEIQEARNFLIEQYAGHERSVES 125
Query: 365 VEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFF 544 +EAA +KIIM+SFR R V+ESPPWV+ ++N EVPPS++I++RA F Sbjct: 126 IEAAFEKIIMKSFRERKRSKINLKSKLKKKVDESPPWVRSLINFLEVPPSEVIIRRACLF 185
Query: 545 GLMGVWS-DESSRGGP 589 ++GVWS SS GGP Sbjct: 186 AVIGVWSVMNSSEGGP 201
Score = 33.1 bits (74), Expect(2) = 2e-34 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +3
Query: 564 VMNPAEGGPAFQVAVSL 614 VMN +EGGPAFQVAVSL Sbjct: 193 VMNSSEGGPAFQVAVSL 209
>tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212552 PE=4 SV=1 Length = 214
Score = 130 bits (326), Expect = 8e-29 Identities = 69/133 (51%), Positives = 87/133 (65%), Gaps = 1/133 (0%) Frame = +2
Query: 194 ALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEA 373 A G S VFPR+ V+DP K LGV++DASE E++ ARN+L EQY HE+SREA+E+ Sbjct: 4 AFGSSDVNSSGPVFPRLGVQDPFKRLGVSQDASEEEVREARNYLVEQYNGHEKSREAIES 63
Query: 374 AHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLM 553 A+D IIM+SFR R VEESPPWV+ I+N+ EVP I+ QRAA F L+ Sbjct: 64 AYDTIIMQSFRVRKASKMDLKSNLRKKVEESPPWVRGIVNMIEVPSKTIMGQRAALFLLL 123
Query: 554 GVWS-DESSRGGP 589 GVWS + GGP Sbjct: 124 GVWSVFNPANGGP 136
Score = 36.6 bits (83), Expect = 1.2 Identities = 19/30 (63%), Positives = 20/30 (66%) Frame = +3
Query: 528 RGRPFLDLWECGVMNPAEGGPAFQVAVSLA 617 R FL L V NPA GGPAFQVA+SLA Sbjct: 116 RAALFLLLGVWSVFNPANGGPAFQVAISLA 145
>tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222052 PE=4 SV=1 Length = 262
Score = 127 bits (319), Expect = 5e-28 Identities = 70/130 (53%), Positives = 84/130 (64%), Gaps = 1/130 (0%) Frame = +2
Query: 203 GSSDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHD 382 G ++ VFPR VRDP K+LGV+ DASE EI+ A+N+L EQY HE SREA+EAA++ Sbjct: 55 GGAENLKPPVFPRRNVRDPFKLLGVSPDASEEEIREAKNYLTEQYYGHEYSREAIEAAYE 114
Query: 383 KIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVW 562 KIIM SFR R VEESPPWV+ ILN+ EVP I QRAA F L+GVW Sbjct: 115 KIIMHSFRVRKASKINLKTNLKKKVEESPPWVQAILNMVEVPNKTITGQRAALFFLLGVW 174
Query: 563 S-DESSRGGP 589 S + GGP Sbjct: 175 SVFNPAEGGP 184
Score = 37.7 bits (86), Expect = 0.54 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = +3
Query: 543 LDLWECGVMNPAEGGPAFQVAVSLA 617 L +W V NPAEGGPAFQVAVSLA Sbjct: 171 LGVWS--VFNPAEGGPAFQVAVSLA 193
>tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129803 PE=4 SV=1 Length = 203
Score = 127 bits (319), Expect = 5e-28 Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Frame = +2
Query: 230 VFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESFRA 409 VFPR VRDP K+LG++ DASE EI+ A+N+L EQY HE SREA+EAA++KIIM S+R Sbjct: 5 VFPRRNVRDPFKLLGLSSDASEEEIREAKNYLTEQYHGHEYSREAIEAAYEKIIMHSYRV 64
Query: 410 RXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWS-DESSRGG 586 R VEESPPWV+ ILN+ EVP II QRAA F L+GVWS + GG Sbjct: 65 RKASKINLKTNLKKKVEESPPWVRAILNMVEVPNKTIIGQRAALFFLLGVWSVFNPAEGG 124
Query: 587 P 589 P Sbjct: 125 P 125
Score = 37.7 bits (86), Expect = 0.54 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = +3
Query: 543 LDLWECGVMNPAEGGPAFQVAVSLA 617 L +W V NPAEGGPAFQVAVSLA Sbjct: 112 LGVWS--VFNPAEGGPAFQVAVSLA 134
>tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028047 PE=4 SV=1 Length = 269
Score = 120 bits (302), Expect(2) = 2e-27 Identities = 65/135 (48%), Positives = 83/135 (61%), Gaps = 5/135 (3%) Frame = +2
Query: 200 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAV 367 G D G++ VFPR +RDP+K+LGV RDA+E EI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 368 EAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFG 547 E A++KIIM+S++ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFA 176
Query: 548 LMGVWS-DESSRGGP 589 + WS S+ GP Sbjct: 177 FIAGWSIATSAENGP 191
Score = 25.4 bits (54), Expect(2) = 2e-27 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +3
Query: 564 VMNPAEGGPAFQVAVSL 614 + AE GPAFQ+A+SL Sbjct: 183 IATSAENGPAFQLAISL 199
>tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31181 PE=4 SV=1 Length = 269
Score = 120 bits (302), Expect(2) = 2e-27 Identities = 65/135 (48%), Positives = 83/135 (61%), Gaps = 5/135 (3%) Frame = +2
Query: 200 GGSSDEGYT----AVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAV 367 G D G++ VFPR +RDP+K+LGV RDA+E EI+SARNFL +QYA HE S EA+ Sbjct: 57 GAGGDRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAI 116
Query: 368 EAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFG 547 E A++KIIM+S++ R VEESP WVK +L FEVP II +R FF Sbjct: 117 EGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFA 176
Query: 548 LMGVWS-DESSRGGP 589 + WS S+ GP Sbjct: 177 FIAGWSIATSAENGP 191
Score = 25.4 bits (54), Expect(2) = 2e-27 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +3
Query: 564 VMNPAEGGPAFQVAVSL 614 + AE GPAFQ+A+SL Sbjct: 183 IATSAENGPAFQLAISL 199
>tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 270
Score = 118 bits (296), Expect(2) = 1e-26 Identities = 62/124 (50%), Positives = 78/124 (62%), Gaps = 1/124 (0%) Frame = +2
Query: 221 YTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHDKIIMES 400 + VFPR +RDP+K+LGV RDASE EI+ ARNFL +QYA HE S EA+E A++KIIM+S Sbjct: 69 HVPVFPRYRIRDPYKLLGVDRDASEEEIRGARNFLIQQYAGHEPSEEAIEGAYEKIIMKS 128
Query: 401 FRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWS-DESS 577 ++ R VEESP WVK +L FEVP II +R FF + WS S+ Sbjct: 129 YQQRKKTKINLKTKLKKRVEESPSWVKALLGCFEVPSMDIISRRLFFFAFIAGWSIATSA 188
Query: 578 RGGP 589 GP Sbjct: 189 ENGP 192
Score = 25.4 bits (54), Expect(2) = 1e-26 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +3
Query: 564 VMNPAEGGPAFQVAVSL 614 + AE GPAFQ+A+SL Sbjct: 184 IATSAENGPAFQLAISL 200
>tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017550 PE=4 SV=1 Length = 235
Score = 121 bits (304), Expect = 3e-26 Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 5/154 (3%) Frame = +2
Query: 143 PGQKGSRHIHHHNKIV----CALGGSSDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQS 310 P ++ S+ + + ++ CA+ G FPRI V DP+K LG+ DASE EI S Sbjct: 4 PARENSKKLKANGLVIRGPRCAVDTPYGGGNLTKFPRITVWDPYKRLGIPPDASEEEIWS 63
Query: 311 ARNFLAEQYAHHERSREAVEAAHDKIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRIL 490 +RNFL +QYA HERS E++EAA +KI+M SF R VEESPPWVK +L Sbjct: 64 SRNFLLQQYAGHERSEESIEAAFEKILMASFINRRKTKINLKSKLKKKVEESPPWVKNLL 123
Query: 491 NIFEVPPSQIILQRAAFFGLMGVWS-DESSRGGP 589 N E+P +++I +R F MG WS S+ GGP Sbjct: 124 NFVELPATEVIFRRLFLFAFMGGWSIINSAEGGP 157
Score = 34.3 bits (77), Expect = 6.0 Identities = 17/26 (65%), Positives = 20/26 (76%) Frame = +3
Query: 540 FLDLWECGVMNPAEGGPAFQVAVSLA 617 F+ W ++N AEGGPAFQVAVSLA Sbjct: 143 FMGGWS--IINSAEGGPAFQVAVSLA 166
>tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea mays PE=2 SV=1 Length = 262
Score = 113 bits (282), Expect(2) = 5e-25 Identities = 60/125 (48%), Positives = 76/125 (60%) Frame = +2
Query: 203 GSSDEGYTAVFPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHD 382 GS D +T VFPR DP+K+LGV +DASE E++SARNFL +QYA +E S EA+E A+D Sbjct: 55 GSYDSEHTPVFPRQQSWDPYKLLGVDQDASEEEVRSARNFLLKQYAGYEESEEAIEGAYD 114
Query: 383 KIIMESFRARXXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVW 562 KIIM S+ R VE SP W+K + FEVP +II +R AFF W Sbjct: 115 KIIMNSYTDRKKSKFNLKSKLKEQVEGSPSWLKALFGYFEVPSLEIISRRFAFFAFFAGW 174
Query: 563 SDESS 577 S +S Sbjct: 175 SIATS 179
Score = 25.4 bits (54), Expect(2) = 5e-25 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +3
Query: 564 VMNPAEGGPAFQVAVSLA 617 + AE GPAFQ+A+SLA Sbjct: 176 IATSAETGPAFQLAMSLA 193
>tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum tuberosum PE=2 SV=1 Length = 251
Score = 115 bits (289), Expect = 2e-24 Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 1/120 (0%) Frame = +2
Query: 233 FPRIYVRDPHKVLGVTRDASEVEIQSARNFLAEQYAHHERSREAVEAAHDKIIMESFRAR 412 F R+ V DP+K LG++RDASE E+ S+RNFL QYA+HERS E++EAA +KI+M+SF R Sbjct: 54 FSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEAAFEKILMKSFINR 113
Query: 413 XXXXXXXXXXXXXXVEESPPWVKRILNIFEVPPSQIILQRAAFFGLMGVWS-DESSRGGP 589 VEESPPWV+ +L+ E+PP IIL+R FG M WS S+ GP Sbjct: 114 KKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLFGFMACWSVMNSAEAGP 173
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