DK962974
Clone id TST39A01NGRL0015_E17
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_E17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGCGAGCGGTCTCTACACCATGCCGTGCACGTGCGTGGGTGCATTGATGCTAAGGGAGTT
CGAAGATGGCACTTATGTGTCGGATCGGCTTCAACAAGTCTTTGCAGCGCAATCTGTGCG
TGTGTGCGGTGCACTGAAGCCGAGGGAGTGTGAAGGGAACATCGTGTGTGCAGGTTGGGG
CCGTTGCATTCAGTGCTGTGAAGGTGATGTTTATACCAAGCTTGGGGTTTCTCTGCGAGA
GTGCCACGAGACCTGGTGTTCGAACTCTGAGGCTAGCGTTTTGTAGGGCGGTGCTATATG
TCAAAGGCTTCTGTGAAGAGACGAAGTCTTGCAGAGTGCTACAGATCAAAGGCTTCTGCT
CCTACAGTGTATGGGGCAAGAATATGTCTAAATGGCCTAGGTGGAAAGGTGGTCGAGCTT
GCTTGCTGGCTGTCTACAAGCTAAAGTCTTGTGCCGATTACAAAACAACGAATGCTTGTG
AGGAGGGTGATAGTGATGCTTTTGGAATCAATTGAGC
■■Homology search results ■■ -
sp_hit_id P04929
Definition sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium lophurae
Align length 16
Score (bit) 26.6
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962974|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_E17, 5'
(517 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium l... 27 2.8
sp|P16087|GAG_FIVPE Gag polyprotein OS=Feline immunodeficiency v... 30 5.1
sp|Q9QWK4|CD5L_MOUSE CD5 antigen-like OS=Mus musculus GN=Cd5l PE... 30 5.1
sp|P13387|EGFR_CHICK Epidermal growth factor receptor (Fragment)... 30 5.2
sp|Q92154|SMP_COTJA Schwann cell myelin protein OS=Coturnix cotu... 30 6.8
sp|Q9SH14|MUB5_ARATH Membrane-anchored ubiquitin-fold protein 5 ... 30 8.8

>sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium
lophurae PE=4 SV=1
Length = 351

Score = 26.6 bits (57), Expect(2) = 2.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2

Query: 498 HHYHPPHKHSLFCNRH 451
HH+HPPH H + H
Sbjct: 104 HHHHPPHHHHHLGHHH 119



Score = 23.5 bits (49), Expect(2) = 2.8
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2

Query: 504 QKHHYHPPHKH 472
++HH+H PH H
Sbjct: 91 EEHHHHHPHPH 101


>sp|P16087|GAG_FIVPE Gag polyprotein OS=Feline immunodeficiency
virus (isolate Petaluma) GN=gag PE=3 SV=1
Length = 450

Score = 30.4 bits (67), Expect = 5.1
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +3

Query: 168 VQVGAVAFSAVKVMFIPSLGFLCESATRPGVRTLRLAFCRAVLYVKGFCEETKSCRVLQI 347
+Q+ A A + V+V+ G +C + +PG ++ C E K C
Sbjct: 355 MQLLAEALTKVQVVQSKGSGPVCFNCKKPG-------------HLARQCREVKKCNKCGK 401

Query: 348 KGFCSYSVWGKNMSKWPRWKGGRA 419
G + W N WK GRA
Sbjct: 402 PGHLAAKCWQGNRKNSGNWKAGRA 425


>sp|Q9QWK4|CD5L_MOUSE CD5 antigen-like OS=Mus musculus GN=Cd5l PE=1
SV=2
Length = 352

Score = 30.4 bits (67), Expect = 5.1
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3

Query: 303 KGFCEETKSCRVLQIKGFCSYSVWGKNMSKWPRWKGGRACLLAVYKLKSCADYKTTNACE 482
K C + R L G C+ S GK P W G +C L+SC + N C
Sbjct: 176 KVVCRQLGCGRALLTYGSCNKSTQGKG----PIWMGKMSCSGQEANLRSCLLSRLENNCT 231

Query: 483 EGD 491
G+
Sbjct: 232 HGE 234


>sp|P13387|EGFR_CHICK Epidermal growth factor receptor (Fragment)
OS=Gallus gallus GN=EGFR PE=2 SV=1
Length = 703

Score = 30.4 bits (67), Expect = 5.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2

Query: 128 GALKPRECEGNIVCAGWGRCIQCCEGDVYTKLGVSLREC 244
GA REC N V G C++ C D Y +R+C
Sbjct: 295 GATCVRECPHNYVVTDHGSCVRSCNTDTYEVEENGVRKC 333


>sp|Q92154|SMP_COTJA Schwann cell myelin protein OS=Coturnix
coturnix japonica GN=SMP PE=1 SV=1
Length = 620

Score = 30.0 bits (66), Expect = 6.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1

Query: 157 PFTLPRLQCTAHTHRLRCKDLLKPIRHISAIFELP 53
P LP +CTA +RC ++ I S +FELP
Sbjct: 412 PLVLPASRCTAGGDGVRCVCMVNSIPDSSLVFELP 446


>sp|Q9SH14|MUB5_ARATH Membrane-anchored ubiquitin-fold protein 5
OS=Arabidopsis thaliana GN=MUB5 PE=1 SV=1
Length = 120

Score = 29.6 bits (65), Expect = 8.8
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +1

Query: 295 YMSKASVKRRSLAECYRSKASAPTVYGARICLNGLGGKVVELACWLSTS*SLVPITKQRM 474
+M+ AS+K + +A+ + K +AP + +N GGK++E LS + SL+ I +
Sbjct: 27 FMTVASLKEKIIAQWPKDKENAPKMINEVKLIN--GGKILENNKTLSEARSLITIGELPG 84

Query: 475 LVRRVIVML 501
+V + V+L
Sbjct: 85 IVTTMHVVL 93


tr_hit_id Q7SYM5
Definition tr|Q7SYM5|Q7SYM5_DANRE Lsm14a protein OS=Danio rerio
Align length 91
Score (bit) 34.7
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962974|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_E17, 5'
(517 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7SYM5|Q7SYM5_DANRE Lsm14a protein OS=Danio rerio GN=lsm14a P... 35 2.9
tr|A6VXJ0|A6VXJ0_MARMS Putative methylamine utilization protein ... 33 6.5
tr|A1X1N9|A1X1N9_9BURK Putative transcriptional regulator OS=Jan... 33 6.5
tr|Q41812|Q41812_MAIZE Hox2a protein OS=Zea mays GN=Hox2a PE=2 SV=1 33 8.5
tr|B6KAG3|B6KAG3_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.5

>tr|Q7SYM5|Q7SYM5_DANRE Lsm14a protein OS=Danio rerio GN=lsm14a PE=2
SV=1
Length = 243

Score = 34.7 bits (78), Expect = 2.9
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3

Query: 156 GTSCVQVGAVAFSAVKVMFIPS--LGFLCESATRPGVRTLRLAF-CRAVLYVKGFCEETK 326
G++ G+ SA+ FI GF+ E +T P + +LR + + + +G + T+
Sbjct: 144 GSALGLFGSETGSAISSAFISDNLCGFIAEGSTSPALDSLRKSPPVESSFHSRGLHQHTE 203

Query: 327 SCRVLQIKGFCSYSVWGKNMSKWPRWKGGRA 419
+C + S W S WPRW R+
Sbjct: 204 TCG----SDGANQSWWSSCCSAWPRWSSPRS 230


>tr|A6VXJ0|A6VXJ0_MARMS Putative methylamine utilization protein
MauG OS=Marinomonas sp. (strain MWYL1) GN=Mmwyl1_2247
PE=3 SV=1
Length = 419

Score = 33.5 bits (75), Expect = 6.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2

Query: 131 ALKPRECEGNIVCAGWGRCIQCCEGDVYTKLG 226
AL P + EG I+ G GRC C GD++T +G
Sbjct: 270 ALTPVQKEGAILFFGKGRCAACHNGDLFTDMG 301


>tr|A1X1N9|A1X1N9_9BURK Putative transcriptional regulator
OS=Janthinobacterium lividum PE=4 SV=1
Length = 347

Score = 33.5 bits (75), Expect = 6.5
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -1

Query: 337 TLQDFV---SSQKPLTYSTALQNASLRVRTPGLVALSQRNPKLGINITFTALNATAPTCT 167
+++DFV + Q + STA +A + TPG++AL P ++ PT
Sbjct: 96 SMRDFVFHIAVQGIIETSTARPSAKAQQYTPGILALDMNQP----------MSMARPTRA 145

Query: 166 HDVPFTLPRLQCTAH 122
H + F LPR +AH
Sbjct: 146 HVLAFFLPRAAVSAH 160


>tr|Q41812|Q41812_MAIZE Hox2a protein OS=Zea mays GN=Hox2a PE=2 SV=1
Length = 1576

Score = 33.1 bits (74), Expect = 8.5
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = -1

Query: 349 LICSTLQ-DFVSSQKPLTYSTALQNASLRVRTPGLVALSQRNPKLGINITFTALNATAPT 173
++CST + +S +PL STA Q A+ + + G NPK+G+ + +A T
Sbjct: 292 VLCSTSERKNEASSEPLNDSTAAQPAARKKK--GGAMPKTDNPKIGVRVLRSASGKKNET 349

Query: 172 CTHDV-------PFTLPRLQCTAHTHRLRCKDLLKPIRHISAI 65
CT V P + C R KD LK + I I
Sbjct: 350 CTEPVNRSTSREPTVTKKRNCKPSKDRGPKKDYLKICQRIKYI 392


>tr|B6KAG3|B6KAG3_TOXGO Putative uncharacterized protein OS=Toxoplasma
gondii ME49 GN=TGME49_110970 PE=4 SV=1
Length = 3182

Score = 33.1 bits (74), Expect = 8.5
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Frame = -2

Query: 363 RSRSL*SVALCKTSS------LHRSL*HIAPPYKTLASEFEHQVSWHSRRETPSLV*TSP 202
R R+ +A C SS H S H+ P AS F Q RET S SP
Sbjct: 1291 RRRANAGLASCSASSRRGFRLFHSSSIHLQSPPSPDASSFRRQT-----RETSSPASLSP 1345

Query: 201 SQH*MQRPQPAHTMFPSHSLGFSAPHTRT 115
S+ +H++ P H S PH+ T
Sbjct: 1346 SE--------SHSLSPLHGSNLSCPHSST 1366