DK962975 |
Clone id |
TST39A01NGRL0015_E19 |
Library |
TST39 |
Length |
631 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_E19. 5' end sequence. |
Accession |
DK962975 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL506Contig1 |
Sequence |
GGAAAGAGCGCGATCAGACAGAGAGTTCGAAGCCTGCATTTGCCATGGAAAGCTTTGATT CCTACGTTGGGGGGGAGGAGGATCTTCAGGGAGCGGCCAGCGCTCGCCCCTTTGATGGCG ATGGCTACATGGGTTTTGATCCGAGGCTTTCCTCCCAGAGATTTGAAAGTTTCGACACCT TTGGAGGTGAAAATCCGTACATGTCGAGCCAAACTGAAGATCTGGGTTTAGTAGAAGATG AAGAAGGAGAAGATGGATTTTCTGCTGCTAAGCTGGGTAGCAGCAATGGAGCCTTTAACG CACCCCCTGTGTATCAAAGCTCTTTTGATGATGATATCGGTGATGGGCAGCACTCTCCTG CCATGTCCTCTCCTTTTGGACAGAGCTTTGAGTCCAGACTCCACTCCGAGTTCACTCCTG GAAATGAATTTTCCCCATCTGCAGATTCAAATGGCAAGGGTTTTGGCCATATTGATGATG GATTTGGACATGGTGAGGCTGATCCCGTTTTTGTTTATCCACCTCCCAGTGGTTCCCTGA ATGGTGGTTCTGTCCTTCCGCCTCTAGAAGAAATGCAGGCTGAAGAAGGCTTCATTTTGC GTGAATGGAAGCGCCAAAATGCTATTCGCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5Z8V7 |
Definition |
sp|Q5Z8V7|HACL2_ORYSJ Probable histone acetyltransferase HAC-like 2 OS=Oryza sativa subsp. japonica |
Align length |
66 |
Score (bit) |
35.0 |
E-value |
0.32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRT8 |
Definition |
tr|B8LRT8|B8LRT8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
198 |
Score (bit) |
95.1 |
E-value |
3.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962975|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_E19, 5' (631 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LRT8|B8LRT8_PICSI Putative uncharacterized protein OS=Picea... 95 3e-18 tr|A5B4U6|A5B4U6_VITVI Putative uncharacterized protein OS=Vitis... 80 1e-13 tr|A5BXH1|A5BXH1_VITVI Putative uncharacterized protein OS=Vitis... 75 3e-12 tr|A9PEC5|A9PEC5_POPTR Putative uncharacterized protein OS=Popul... 51 7e-05 tr|B7FKY8|B7FKY8_MEDTR Putative uncharacterized protein (Fragmen... 49 3e-04 tr|B4FIZ5|B4FIZ5_MAIZE Putative uncharacterized protein OS=Zea m... 48 4e-04 tr|A9RIQ2|A9RIQ2_PHYPA Predicted protein OS=Physcomitrella paten... 47 7e-04 tr|A9RIQ1|A9RIQ1_PHYPA Predicted protein OS=Physcomitrella paten... 47 7e-04 tr|Q5Z402|Q5Z402_ORYSJ Os06g0731800 protein OS=Oryza sativa subs... 47 0.001 tr|A9PEB0|A9PEB0_POPTR Putative uncharacterized protein OS=Popul... 47 0.001 tr|Q8L9R8|Q8L9R8_ARATH Putative uncharacterized protein OS=Arabi... 45 0.003 tr|O04209|O04209_ARATH Expressed protein (Putative uncharacteriz... 45 0.003 tr|A9PA40|A9PA40_POPTR Putative uncharacterized protein OS=Popul... 45 0.004 tr|Q7XKE9|Q7XKE9_ORYSJ Os04g0679100 protein OS=Oryza sativa subs... 45 0.005 tr|Q259D4|Q259D4_ORYSA H0801D08.11 protein OS=Oryza sativa GN=H0... 45 0.005 tr|A2XZ05|A2XZ05_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.005 tr|O65024|O65024_ARATH Putative uncharacterized protein OS=Arabi... 42 0.030 tr|B4JL87|B4JL87_DROGR GH12806 OS=Drosophila grimshawi GN=GH1280... 40 0.12 tr|A3BFN9|A3BFN9_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.15 tr|B4NEQ4|B4NEQ4_DROWI GK25682 OS=Drosophila willistoni GN=GK256... 39 0.20 tr|B4QV27|B4QV27_DROSI GD19193 OS=Drosophila simulans GN=GD19193... 39 0.26 tr|B3L500|B3L500_PLAKH Putative uncharacterized protein OS=Plasm... 39 0.26 tr|B4FJF0|B4FJF0_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.33 tr|A2SZ54|A2SZ54_DANRE Voltage-dependent calcium channel beta 2b... 38 0.44 tr|Q6Z3A8|Q6Z3A8_ORYSJ Putative uncharacterized protein P0038F09... 38 0.57 tr|A2YL02|A2YL02_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.57 tr|B2XY77|B2XY77_DANRE Calcium channel beta subunit 2.1_tv6 OS=D... 38 0.58 tr|B2XY76|B2XY76_DANRE Calcium channel beta subunit 2.1_tv5 OS=D... 38 0.58 tr|B2XY73|B2XY73_DANRE Calcium channel beta subunit 2.1_tv2 OS=D... 38 0.58 tr|B2XY72|B2XY72_DANRE Calcium channel beta subunit 2.1_tv1 OS=D... 38 0.58
>tr|B8LRT8|B8LRT8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 354
Score = 95.1 bits (235), Expect = 3e-18 Identities = 71/198 (35%), Positives = 97/198 (48%), Gaps = 3/198 (1%) Frame = +3
Query: 45 MESFDSYVGGEEDLQGAASARPFDGDGYMGFDPRLSSQRFESFDTFGGENPYMSSQTXXX 224 M FDSYVGG ++L G S RPFD DGY+G+DPRL SQR++S +F + + Sbjct: 1 MSGFDSYVGGGDELAGG-STRPFD-DGYIGYDPRLPSQRYDS--SFRSPDQFPVDDADAD 56
Query: 225 XXXXXXXXXXXFSAAKLGSSNGAFNAPP--VYQSSFDDDIGDGQHSPAMSSPFGQSFESR 398 F + A+ PP VY ++ +D+ Q P F QSF S Sbjct: 57 ADADESKDADDFD------NGNAYEVPPPAVYMNNSEDEAPPQQ--PDTPPMFSQSFGSS 108
Query: 399 LHS-EFTPGNEFSPSADSNXXXXXXXXXXXXXXEADPVFVYPPPSGSLNGGSVLPPLEEM 575 H +F G ++SP A E + ++ PP + G +LP EEM Sbjct: 109 SHHVDF--GGDYSPQASE---------INGKPFEVNGLYGMPPLASD---GPILPSPEEM 154
Query: 576 QAEEGFILREWKRQNAIR 629 Q +EGF+LREW+RQNAIR Sbjct: 155 QQDEGFMLREWRRQNAIR 172
>tr|A5B4U6|A5B4U6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014565 PE=4 SV=1 Length = 319
Score = 80.1 bits (196), Expect = 1e-13 Identities = 63/186 (33%), Positives = 82/186 (44%) Frame = +3
Query: 69 GGEEDLQGAASARPFDGDGYMGFDPRLSSQRFESFDTFGGENPYMSSQTXXXXXXXXXXX 248 G E AAS RPFD DGY+G+DPRL SQRF+SF F S Sbjct: 12 GDESRPAAAASTRPFDDDGYLGYDPRLPSQRFDSFTNFADSESVKES----------VED 61
Query: 249 XXXFSAAKLGSSNGAFNAPPVYQSSFDDDIGDGQHSPAMSSPFGQSFESRLHSEFTPGNE 428 +++A +++ F + P+ + SP G F + H EF + Sbjct: 62 SPIYNSASYAAADDVFTSQPIPDTP----------SPPPIYVSGGGFAADQH-EF---SS 107
Query: 429 FSPSADSNXXXXXXXXXXXXXXEADPVFVYPPPSGSLNGGSVLPPLEEMQAEEGFILREW 608 FSP A+ D F +GS G +LPP EMQ+EEGF LREW Sbjct: 108 FSPEANGKVF--------------DEGF-----AGS--DGPILPPPTEMQSEEGFALREW 146
Query: 609 KRQNAI 626 +RQNAI Sbjct: 147 RRQNAI 152
>tr|A5BXH1|A5BXH1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004099 PE=4 SV=1 Length = 322
Score = 75.1 bits (183), Expect = 3e-12 Identities = 61/204 (29%), Positives = 85/204 (41%), Gaps = 9/204 (4%) Frame = +3
Query: 45 MESFDSYVGGEEDLQGAASARPFDGDGYMGFDPRLSSQRFESFDTFGGENPYMSSQTXXX 224 M +FD+Y ED++ A+S RPFD D ++ +DP L S+RF+S+ +F + Y Sbjct: 1 MSAFDAYSNDGEDVR-ASSNRPFDDDTFVEYDPSLPSRRFDSYASFATADDY-------- 51
Query: 225 XXXXXXXXXXXFSAAKLGSSNGAFNAPPVYQSSFDDDIG--------DGQHS-PAMSSPF 377 A +APP +D++ DG H P M Sbjct: 52 ---------------------AADDAPPAGGFPVEDEVTVDHVSHNVDGVHPLPGMYGFE 90
Query: 378 GQSFESRLHSEFTPGNEFSPSADSNXXXXXXXXXXXXXXEADPVFVYPPPSGSLNGGSVL 557 G S + F+ + P A+ N +D G VL Sbjct: 91 GSSMADDPNPNFSEDSFSVPIANGNGKPYDISADNEDIFSSD--------------GPVL 136
Query: 558 PPLEEMQAEEGFILREWKRQNAIR 629 PP EMQ EEGFILREW+RQNAI+ Sbjct: 137 PPPTEMQPEEGFILREWRRQNAIQ 160
>tr|A9PEC5|A9PEC5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 151
Score = 50.8 bits (120), Expect = 7e-05 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = +3
Query: 516 YPPPSGSLNGGSVLPPLEEMQAEEGFILREWKRQNAIR 629 + P ++ G +LPP EM++EEGF LREW+R+NAIR Sbjct: 56 FSPEQNGISDGPILPPPSEMESEEGFALREWRRENAIR 93
>tr|B7FKY8|B7FKY8_MEDTR Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1 Length = 295
Score = 48.5 bits (114), Expect = 3e-04 Identities = 35/103 (33%), Positives = 49/103 (47%) Frame = +3
Query: 318 SSFDDDIGDGQHSPAMSSPFGQSFESRLHSEFTPGNEFSPSADSNXXXXXXXXXXXXXXE 497 S+FD D+ + +SP F S+ PG +SPS + + Sbjct: 38 SNFDGDVTVDHAAAETTSPEIYGF-----SDPNPG--YSPSPFESVTVENGNDNGNGYGD 90
Query: 498 ADPVFVYPPPSGSLNGGSVLPPLEEMQAEEGFILREWKRQNAI 626 D VFV + G +LPP EM++EEG+ LREW+RQNAI Sbjct: 91 DDGVFV--------SDGPILPPPGEMESEEGYALREWRRQNAI 125
>tr|B4FIZ5|B4FIZ5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 284
Score = 48.1 bits (113), Expect = 4e-04 Identities = 25/42 (59%), Positives = 27/42 (64%) Frame = +3
Query: 501 DPVFVYPPPSGSLNGGSVLPPLEEMQAEEGFILREWKRQNAI 626 D F P S NGG +LPP EM EEGF+LREW RQNAI Sbjct: 59 DDPFAAPADS---NGGPILPPPTEMGREEGFLLREWCRQNAI 97
>tr|A9RIQ2|A9RIQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_66661 PE=4 SV=1 Length = 856
Score = 47.4 bits (111), Expect = 7e-04 Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 4/197 (2%) Frame = +3
Query: 51 SFDSYVGGEEDLQGAASARPFDGDGYMGFDP--RLSSQRFES--FDTFGGENPYMSSQTX 218 ++D + GG +DL G Y GFD R S R ES FD+ + ++ Sbjct: 2 AYDGFSGGADDLSG-----------YSGFDDSARFDSSRLESARFDS-----SFRAADDY 45
Query: 219 XXXXXXXXXXXXXFSAAKLGSSNGAFNAPPVYQSSFDDDIGDGQHSPAMSSPFGQSFESR 398 F K G+S+G + P+Y++ ++ G G M S +G + Sbjct: 46 KPDPFGLDDNREGFDEFK-GASDGYGHPAPIYEN---EESGGG-----MPSTYGAGYAGA 96
Query: 399 LHSEFTPGNEFSPSADSNXXXXXXXXXXXXXXEADPVFVYPPPSGSLNGGSVLPPLEEMQ 578 ++ P +E S + + + +F G GG +LPP EEMQ Sbjct: 97 EYAS-NPTDEGSYHKELD----------------EDLF-----GGDGGGGPMLPPPEEMQ 134
Query: 579 AEEGFILREWKRQNAIR 629 EEG +LR+WKR+NA R Sbjct: 135 -EEGAVLRQWKRENAQR 150
>tr|A9RIQ1|A9RIQ1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_159305 PE=4 SV=1 Length = 407
Score = 47.4 bits (111), Expect = 7e-04 Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 4/197 (2%) Frame = +3
Query: 51 SFDSYVGGEEDLQGAASARPFDGDGYMGFDP--RLSSQRFES--FDTFGGENPYMSSQTX 218 ++D + GG +DL G Y GFD R S R ES FD+ + ++ Sbjct: 2 AYDGFSGGADDLSG-----------YSGFDDSARFDSSRLESARFDS-----SFRAADDY 45
Query: 219 XXXXXXXXXXXXXFSAAKLGSSNGAFNAPPVYQSSFDDDIGDGQHSPAMSSPFGQSFESR 398 F K G+S+G + P+Y++ ++ G G M S +G + Sbjct: 46 KPDPFGLDDNREGFDEFK-GASDGYGHPAPIYEN---EESGGG-----MPSTYGAGYAGA 96
Query: 399 LHSEFTPGNEFSPSADSNXXXXXXXXXXXXXXEADPVFVYPPPSGSLNGGSVLPPLEEMQ 578 ++ P +E S + + + +F G GG +LPP EEMQ Sbjct: 97 EYAS-NPTDEGSYHKELD----------------EDLF-----GGDGGGGPMLPPPEEMQ 134
Query: 579 AEEGFILREWKRQNAIR 629 EEG +LR+WKR+NA R Sbjct: 135 -EEGAVLRQWKRENAQR 150
>tr|Q5Z402|Q5Z402_ORYSJ Os06g0731800 protein OS=Oryza sativa subsp. japonica GN=B1206D04.26 PE=2 SV=1 Length = 291
Score = 46.6 bits (109), Expect = 0.001 Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 10/54 (18%) Frame = +3
Query: 495 EADPVFVYPPPSGSLN----------GGSVLPPLEEMQAEEGFILREWKRQNAI 626 +A F P +GSL+ G VLPP +M A+EGF+LREW+RQNAI Sbjct: 50 DAPSPFGMPEANGSLHDDPFAAPDNDNGPVLPPPNQMGADEGFLLREWRRQNAI 103
>tr|A9PEB0|A9PEB0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 337
Score = 46.6 bits (109), Expect = 0.001 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 19/63 (30%) Frame = +3
Query: 495 EADPVFVYPPPSGSL----------NG---------GSVLPPLEEMQAEEGFILREWKRQ 617 +ADP F + P GS+ NG G +LPP EM+ EEG+ LREW+RQ Sbjct: 63 DADPDFSHQSPFGSVHVENGNGNGYNGADDDVFVSDGPILPPPTEMEPEEGYALREWRRQ 122
Query: 618 NAI 626 NAI Sbjct: 123 NAI 125
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