DK962990 |
Clone id |
TST39A01NGRL0015_F10 |
Library |
TST39 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_F10. 5' end sequence. |
Accession |
DK962990 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL36Contig1 |
Sequence |
CTGCGGAATACTCGTCGGCGACAGCCATGGGTCGAAGACCTGCAAGGTGCTACCGGCAGA TTAAAAACAAGCCATATCCAAAATCTCGTTACTGTAGGGGTGTACCCGACCCAAAAATTC GTATATATGATGTTGGCATGAAGAAAAAGGGTGTTGATGAGTTTCCCTTTTGTGTGCACC TTGTGAGTTGGGAGAAAGAAAATGTCTCCAGTGAAGGCCTGGAGGCAGCTCGTATTGCTT GCAACAAATACATGACAAAATTTGCTGGAAAGGATGCTTTTCATCTACGAGTTCGCGTGC ACCCTTTCCATGTTCTTCGTATCAACAAGATGCTTTCATGTGCCGGAGCTGATAGGCTCC AGACAGGAATGAGGGGTGCTTTTGGAAAGCCCCAGGGCACTTGTGCGCGAGTTGACATTG GGCAGGTCCTATTGAGCGTCCGCTGCAAGGACAATAATGGTATACATGCCCAGGAGGCCT TGCGTCGCGCTAAGTTCAAATTTCCTGGAAGGCAGAAGATTATTGTGAGCCGAAAATGGG GGATTCACCAAATTTTCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SPB3 |
Definition |
sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia |
Align length |
172 |
Score (bit) |
346.0 |
E-value |
4.0e-95 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTC5 |
Definition |
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
172 |
Score (bit) |
352.0 |
E-value |
6.0e-96 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962990|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_F10, 5' (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 352 6e-96 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 348 1e-94 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 348 1e-94 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 348 1e-94 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 347 3e-94 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 346 4e-94 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 345 7e-94 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 345 7e-94 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 345 7e-94 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 345 7e-94 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 345 9e-94 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 345 9e-94 tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 345 1e-93 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 343 4e-93 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 343 4e-93 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 343 4e-93 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 342 6e-93 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 342 6e-93 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 341 1e-92 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 340 2e-92 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 340 4e-92 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 340 4e-92 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 340 4e-92 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 335 1e-90 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 333 5e-90 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 330 3e-89 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 318 9e-86 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 316 6e-85 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 315 1e-84 tr|Q7X9L9|Q7X9L9_WHEAT QM (Fragment) OS=Triticum aestivum PE=2 SV=2 310 3e-83
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 352 bits (904), Expect = 6e-96 Identities = 168/172 (97%), Positives = 169/172 (98%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQGTCARV+IGQVLLSVRCKD NG HAQEALRRAKFKFPGRQKIIVSRKWG Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWG 172
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 348 bits (892), Expect = 1e-94 Identities = 164/172 (95%), Positives = 168/172 (97%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWG Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWG 172
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 348 bits (892), Expect = 1e-94 Identities = 164/172 (95%), Positives = 168/172 (97%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWG Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWG 172
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 348 bits (892), Expect = 1e-94 Identities = 164/172 (95%), Positives = 168/172 (97%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWG Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWG 172
>tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=QM PE=2 SV=1 Length = 216
Score = 347 bits (889), Expect = 3e-94 Identities = 165/172 (95%), Positives = 167/172 (97%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKY+TKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYLTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWG Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWG 172
>tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 224
Score = 346 bits (888), Expect = 4e-94 Identities = 165/176 (93%), Positives = 169/176 (96%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGIHQI 554 +PQG CARV IGQVLLSVRCKDNN HAQEALRRAKFKFPGRQKIIVSRKWG +I Sbjct: 121 RPQGVCARVAIGQVLLSVRCKDNNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKI 176
>tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2 SV=1 Length = 216
Score = 345 bits (886), Expect = 7e-94 Identities = 165/172 (95%), Positives = 166/172 (96%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN MLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINTMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWG Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWG 172
>tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 345 bits (886), Expect = 7e-94 Identities = 164/172 (95%), Positives = 166/172 (96%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SRKWG Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWG 172
>tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 345 bits (886), Expect = 7e-94 Identities = 164/172 (95%), Positives = 166/172 (96%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SRKWG Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWG 172
>tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 345 bits (886), Expect = 7e-94 Identities = 164/172 (95%), Positives = 166/172 (96%) Frame = +3
Query: 27 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 206 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 207 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 386 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 387 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWG 542 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SRKWG Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWG 172
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