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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963021
Clone id TST39A01NGRL0015_G17
Library
Length 413
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_G17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TGATTGGCCACTACTTGGGAGAGTTTTCCATCAGCTACAAGCCTGTGAAGCATGGAAGGC
CCGGCATTGGTGCCACCCACTCTTCTCGGTTTATTCCACTGAAGTAGTTTCTGATGGTGG
CTATGAATTGTGGAGGCTTGGAGAATTATTGACACCTTCTGCTAATCAAGACTTAAGAGC
GAACTTTTTTTGTCAACAATGTTCTCTTCAAGGTGTCATTTCTTAAGAGCGAACTTTTTT
TGTCAACAATGTTCTCTTCAAGGTGTCATTTCTTGTTGGATTTTGAACATGTAACCTTAG
CAATTGACAGAGGGGTTAAAATTTTGTCTAGTAGGACCAGTTTAAATGAGTTTTTTTTGC
TTTGCTCGATGTGCTTGATACTTGATTACTTAATTCTTGAAGCAAGTTTTTCC
■■Homology search results ■■ -
sp_hit_id P34737
Definition sp|P34737|RS15_PODAN 40S ribosomal protein S15 OS=Podospora anserina
Align length 34
Score (bit) 75.1
E-value 1.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963021|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_G17, 5'
         (413 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34737|RS15_PODAN 40S ribosomal protein S15 OS=Podospora anse...    75   1e-13
sp|P20342|RS15_XENLA 40S ribosomal protein S15 OS=Xenopus laevis...    74   2e-13
sp|P62845|RS15_RAT 40S ribosomal protein S15 OS=Rattus norvegicu...    74   2e-13
sp|Q5RDI7|RS15_PONAB 40S ribosomal protein S15 OS=Pongo abelii G...    74   2e-13
sp|P62844|RS15_PIG 40S ribosomal protein S15 OS=Sus scrofa GN=RP...    74   2e-13
sp|P62843|RS15_MOUSE 40S ribosomal protein S15 OS=Mus musculus G...    74   2e-13
sp|P62842|RS15_MESAU 40S ribosomal protein S15 OS=Mesocricetus a...    74   2e-13
sp|P62841|RS15_HUMAN 40S ribosomal protein S15 OS=Homo sapiens G...    74   2e-13
sp|P62846|RS15_CHICK 40S ribosomal protein S15 OS=Gallus gallus ...    74   2e-13
sp|Q56K10|RS15_BOVIN 40S ribosomal protein S15 OS=Bos taurus GN=...    74   2e-13
sp|O65059|RS15_PICMA 40S ribosomal protein S15 OS=Picea mariana ...    73   4e-13
sp|P31674|RS15_ORYSJ 40S ribosomal protein S15 OS=Oryza sativa s...    73   4e-13
sp|Q945U1|RS15_ELAOL 40S ribosomal protein S15 OS=Elaeis oleifer...    73   4e-13
sp|P70066|RS15_XIPMA 40S ribosomal protein S15 OS=Xiphophorus ma...    73   5e-13
sp|Q9UTQ6|RS15B_SCHPO 40S ribosomal protein S15-B OS=Schizosacch...    73   5e-13
sp|O94715|RS15A_SCHPO 40S ribosomal protein S15-A OS=Schizosacch...    73   5e-13
sp|Q9FY64|RS154_ARATH 40S ribosomal protein S15-4 OS=Arabidopsis...    73   5e-13
sp|Q08112|RS151_ARATH 40S ribosomal protein S15-1 OS=Arabidopsis...    73   5e-13
sp|Q9XVP0|RS15_CAEEL 40S ribosomal protein S15 OS=Caenorhabditis...    71   2e-12
sp|Q9FIX6|RS155_ARATH 40S ribosomal protein S15-5 OS=Arabidopsis...    70   3e-12
sp|Q9FY65|RS153_ARATH 40S ribosomal protein S15-3 OS=Arabidopsis...    70   3e-12
sp|Q54N17|RS15_DICDI 40S ribosomal protein S15 OS=Dictyostelium ...    68   2e-11
sp|Q9FY66|RS152_ARATH 40S ribosomal protein S15-2 OS=Arabidopsis...    67   3e-11
sp|P54018|RS19_METJA 30S ribosomal protein S19P OS=Methanocaldoc...    59   1e-08
sp|Q6L1C3|RS19_PICTO 30S ribosomal protein S19P OS=Picrophilus t...    55   8e-08
sp|B1L708|RS19_KORCO 30S ribosomal protein S19P OS=Korarchaeum c...    54   2e-07
sp|Q97BX3|RS19_THEVO 30S ribosomal protein S19P OS=Thermoplasma ...    54   3e-07
sp|Q9HIR3|RS19_THEAC 30S ribosomal protein S19P OS=Thermoplasma ...    54   3e-07
sp|P15010|RS19_HALSA 30S ribosomal protein S19P OS=Halobacterium...    53   5e-07
sp|Q3IMY4|RS19_NATPD 30S ribosomal protein S19P OS=Natronomonas ...    52   7e-07

>sp|P34737|RS15_PODAN 40S ribosomal protein S15 OS=Podospora
           anserina GN=RPS15 PE=3 SV=1
          Length = 152

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 119 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 152


>sp|P20342|RS15_XENLA 40S ribosomal protein S15 OS=Xenopus laevis
           GN=rps15 PE=2 SV=3
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145


>sp|P62845|RS15_RAT 40S ribosomal protein S15 OS=Rattus norvegicus
           GN=Rps15 PE=1 SV=2
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145


>sp|Q5RDI7|RS15_PONAB 40S ribosomal protein S15 OS=Pongo abelii
           GN=RPS15 PE=2 SV=3
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145


>sp|P62844|RS15_PIG 40S ribosomal protein S15 OS=Sus scrofa GN=RPS15
           PE=2 SV=2
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145


>sp|P62843|RS15_MOUSE 40S ribosomal protein S15 OS=Mus musculus
           GN=Rps15 PE=2 SV=2
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145


>sp|P62842|RS15_MESAU 40S ribosomal protein S15 OS=Mesocricetus
           auratus GN=RPS15 PE=2 SV=2
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145


>sp|P62841|RS15_HUMAN 40S ribosomal protein S15 OS=Homo sapiens
           GN=RPS15 PE=1 SV=2
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145


>sp|P62846|RS15_CHICK 40S ribosomal protein S15 OS=Gallus gallus
           GN=RPS15 PE=2 SV=2
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145


>sp|Q56K10|RS15_BOVIN 40S ribosomal protein S15 OS=Bos taurus
           GN=RPS15 PE=2 SV=3
          Length = 145

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           IGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 IGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
tr_hit_id Q5B0D3
Definition tr|Q5B0D3|Q5B0D3_EMENI RS15_PODAN 40S RIBOSOMAL PROTEIN S15 (S12) OS=Emericella nidulans
Align length 34
Score (bit) 75.1
E-value 2.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963021|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_G17, 5'
         (413 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5B0D3|Q5B0D3_EMENI RS15_PODAN 40S RIBOSOMAL PROTEIN S15 (S12...    75   2e-12
tr|Q1E5E0|Q1E5E0_COCIM 40S ribosomal protein S15 OS=Coccidioides...    75   2e-12
tr|Q0UU37|Q0UU37_PHANO Putative uncharacterized protein OS=Phaeo...    75   2e-12
tr|Q0CPE1|Q0CPE1_ASPTN 40S ribosomal protein S15 OS=Aspergillus ...    75   2e-12
tr|B8NB78|B8NB78_ASPFL 40S ribosomal protein S15, putative OS=As...    75   2e-12
tr|B8MDW0|B8MDW0_9EURO 40S ribosomal protein S15, putative OS=Ta...    75   2e-12
tr|B6QMA2|B6QMA2_PENMA 40S ribosomal protein S15, putative OS=Pe...    75   2e-12
tr|B2ATQ8|B2ATQ8_PODAN Predicted CDS Pa_1_16650 OS=Podospora ans...    75   2e-12
tr|A6QZ97|A6QZ97_AJECN 40S ribosomal protein S15 OS=Ajellomyces ...    75   2e-12
tr|A2R7W0|A2R7W0_ASPNC Contig An16c0170, complete genome OS=Aspe...    75   2e-12
tr|Q90YQ9|Q90YQ9_ICTPU 40S ribosomal protein S15 OS=Ictalurus pu...    74   3e-12
tr|Q71U13|Q71U13_LAPHA Ribosomal protein S15 OS=Lapemis hardwick...    74   3e-12
tr|Q6Q421|Q6Q421_DANRE Ribosomal protein S15 OS=Danio rerio GN=r...    74   3e-12
tr|Q6DGW6|Q6DGW6_DANRE Ribosomal protein S15 OS=Danio rerio GN=r...    74   3e-12
tr|Q5RJJ6|Q5RJJ6_XENTR Ribosomal protein S15 OS=Xenopus tropical...    74   3e-12
tr|Q3UK70|Q3UK70_MOUSE Putative uncharacterized protein OS=Mus m...    74   3e-12
tr|B6U476|B6U476_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=...    74   3e-12
tr|B5KKL3|B5KKL3_AILME Ribosomal protein S15 OS=Ailuropoda melan...    74   3e-12
tr|Q8ITA6|Q8ITA6_AEQIR Ribosomal protein S15 (Fragment) OS=Aequi...    74   3e-12
tr|Q6IV90|Q6IV90_BRABE Ribosomal protein S15 OS=Branchiostoma be...    74   3e-12
tr|Q6B8B6|Q6B8B6_9ACAR Ribosomal protein S15 OS=Ixodes pacificus...    74   3e-12
tr|Q5I4C5|Q5I4C5_PECGU Ribosomal protein S15 OS=Pectinaria gould...    74   3e-12
tr|Q4PM26|Q4PM26_IXOSC 40S ribosomal protein S15, putative OS=Ix...    74   3e-12
tr|B6NVM8|B6NVM8_BRAFL Putative uncharacterized protein OS=Branc...    74   3e-12
tr|B5M6D9|B5M6D9_ORNHU 40S ribosomal protein S15 OS=Ornithoctonu...    74   3e-12
tr|B0Z9Q6|B0Z9Q6_9BILA Ribosomal protein rps15 OS=Lineus viridis...    74   3e-12
tr|A9UDP4|A9UDP4_9BILA Putative 40S ribosomal protein RPS15 OS=F...    74   3e-12
tr|A9QQ37|A9QQ37_LYCSI 40s ribosomal protein S15 OS=Lycosa singo...    74   3e-12
tr|A8UEL2|A8UEL2_AREMA Ribosomal protein rps15 OS=Arenicola mari...    74   3e-12
tr|A8E6B5|A8E6B5_9BILA Putative 40S ribosomal protein S15 isofor...    74   3e-12

>tr|Q5B0D3|Q5B0D3_EMENI RS15_PODAN 40S RIBOSOMAL PROTEIN S15 (S12)
           OS=Emericella nidulans GN=AN5997.2 PE=3 SV=1
          Length = 177

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 144 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 177


>tr|Q1E5E0|Q1E5E0_COCIM 40S ribosomal protein S15 OS=Coccidioides
           immitis GN=CIMG_02223 PE=3 SV=1
          Length = 153

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 120 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 153


>tr|Q0UU37|Q0UU37_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_04727 PE=3 SV=2
          Length = 151

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 118 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 151


>tr|Q0CPE1|Q0CPE1_ASPTN 40S ribosomal protein S15 OS=Aspergillus
           terreus (strain NIH 2624) GN=ATEG_04443 PE=3 SV=1
          Length = 153

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 120 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 153


>tr|B8NB78|B8NB78_ASPFL 40S ribosomal protein S15, putative
           OS=Aspergillus flavus NRRL3357 GN=AFLA_044530 PE=4 SV=1
          Length = 153

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 120 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 153


>tr|B8MDW0|B8MDW0_9EURO 40S ribosomal protein S15, putative
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_011470 PE=4
           SV=1
          Length = 153

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 120 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 153


>tr|B6QMA2|B6QMA2_PENMA 40S ribosomal protein S15, putative
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_060080 PE=4
           SV=1
          Length = 153

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 120 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 153


>tr|B2ATQ8|B2ATQ8_PODAN Predicted CDS Pa_1_16650 OS=Podospora
           anserina PE=4 SV=1
          Length = 152

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 119 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 152


>tr|A6QZ97|A6QZ97_AJECN 40S ribosomal protein S15 OS=Ajellomyces
           capsulata (strain NAm1 / WU24) GN=HCAG_02704 PE=3 SV=1
          Length = 153

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 120 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 153


>tr|A2R7W0|A2R7W0_ASPNC Contig An16c0170, complete genome
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An16g04940 PE=3 SV=1
          Length = 153

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/34 (97%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 104
           +GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 120 VGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 153