DK963074 |
Clone id |
TST39A01NGRL0015_I23 |
Library |
TST39 |
Length |
655 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_I23. 5' end sequence. |
Accession |
DK963074 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1842Contig1 |
Sequence |
GGCTCGTCTTCGTCTTTTCCACAGCCGCCATCTCCTCTAACACCTTCCTCCTTCAGCACC TTCAGTTGAGTTCCCGTGTTCTCAAGATCTCCTCGTACATACTGGTTTTCAACAGGTTTC CGACATGAGCCATGTCCCCAGACGGCCTCAGAAAGAGGCAGAATGGAGAACCTTGCATGG ATGATTCACTGATCGAGCCCCTTCTCAGATTTACAAATGCTGCTACTGAGTGTGAGGATC TCATCGTGCGAAAACCTGGGTGGCCATCACTTTTCTGCCATTTTCTCGTCAAATGGGTGA AATGGTTTGGTAACTTTGTCAGACGATCTGCTTTCTGGTTGTGCAACATGCTACTTTGTG GGTGTGCTCATGAGAAAGCACATGCGGAGAAAATGCTAACTTTGGATCTTACACCCCTTC AAGAAGAAAAACTTCGACGACTTCAGCTGCGTTTGGAAACTACTTTTGATAGAACAAGGC GTGAACATCAGGAGGCTCTGAAGGCTTTATGGCATGCTGCCTTTCCTGATATTGAACTGC GGGGGCTTGTCTCTGACCAGTGGAAAGAAATGGGGTGGCAGGGCAATGATCCATCAACTG ATTTCAGGGGTGGAGGATATGTTTCTTTAGAGAATCTGCTGTTTTTTGCAACAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54YW1 |
Definition |
sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum |
Align length |
63 |
Score (bit) |
70.9 |
E-value |
6.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0ISP5 |
Definition |
tr|Q0ISP5|Q0ISP5_ORYSJ Os11g0483900 protein OS=Oryza sativa subsp. japonica |
Align length |
122 |
Score (bit) |
123.0 |
E-value |
9.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963074|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_I23, 5' (655 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0ISP5|Q0ISP5_ORYSJ Os11g0483900 protein OS=Oryza sativa subs... 123 9e-27 tr|Q2R485|Q2R485_ORYSJ Phagocytosis and cell motility protein EL... 122 1e-26 tr|B8BKI5|B8BKI5_ORYSI Putative uncharacterized protein OS=Oryza... 122 1e-26 tr|A3CBB0|A3CBB0_ORYSJ Putative uncharacterized protein OS=Oryza... 122 1e-26 tr|B4FG34|B4FG34_MAIZE Putative uncharacterized protein OS=Zea m... 121 3e-26 tr|B4G0D5|B4G0D5_MAIZE ELMO domain-containing protein 2 OS=Zea m... 121 4e-26 tr|A2Q1V0|A2Q1V0_MEDTR Engulfment and cell motility, ELM OS=Medi... 121 4e-26 tr|B8LNV4|B8LNV4_PICSI Putative uncharacterized protein OS=Picea... 120 6e-26 tr|A7PK87|A7PK87_VITVI Chromosome chr15 scaffold_19, whole genom... 120 6e-26 tr|A5B879|A5B879_VITVI Putative uncharacterized protein OS=Vitis... 120 6e-26 tr|Q7XMZ7|Q7XMZ7_ORYSJ Os04g0545100 protein OS=Oryza sativa subs... 119 2e-25 tr|Q7X853|Q7X853_ORYSA OSJNBa0079A21.3 protein OS=Oryza sativa G... 119 2e-25 tr|Q01J24|Q01J24_ORYSA OSIGBa0101C23.3 protein OS=Oryza sativa G... 119 2e-25 tr|B8ASN2|B8ASN2_ORYSI Putative uncharacterized protein OS=Oryza... 119 2e-25 tr|A3A9P2|A3A9P2_ORYSJ Putative uncharacterized protein OS=Oryza... 119 2e-25 tr|A3AW31|A3AW31_ORYSJ Putative uncharacterized protein OS=Oryza... 118 3e-25 tr|Q949F5|Q949F5_ORYSA Putative uncharacterized protein C135ERIP... 117 6e-25 tr|Q6H8H7|Q6H8H7_ORYSJ Os02g0652300 protein OS=Oryza sativa subs... 117 6e-25 tr|B8AG22|B8AG22_ORYSI Putative uncharacterized protein OS=Oryza... 117 6e-25 tr|A7Q9Z2|A7Q9Z2_VITVI Chromosome chr8 scaffold_68, whole genome... 115 2e-24 tr|B6TBE5|B6TBE5_MAIZE ELMO domain-containing protein 2 OS=Zea m... 115 3e-24 tr|O80516|O80516_ARATH Expressed protein (Putative uncharacteriz... 114 5e-24 tr|Q9LY38|Q9LY38_ARATH Putative uncharacterized protein F27H5_50... 113 9e-24 tr|Q8VZ78|Q8VZ78_ARATH Putative uncharacterized protein At3g6026... 113 9e-24 tr|B4FLX2|B4FLX2_MAIZE Putative uncharacterized protein OS=Zea m... 113 1e-23 tr|A7PXC9|A7PXC9_VITVI Chromosome chr12 scaffold_36, whole genom... 113 1e-23 tr|A9RRR0|A9RRR0_PHYPA Predicted protein OS=Physcomitrella paten... 112 2e-23 tr|B4FQW2|B4FQW2_MAIZE Putative uncharacterized protein OS=Zea m... 112 3e-23 tr|Q940L9|Q940L9_ARATH At2g44770/F16B22.26 OS=Arabidopsis thalia... 111 4e-23 tr|Q7XTC0|Q7XTC0_ORYSJ Os04g0101700 protein OS=Oryza sativa subs... 110 1e-22
>tr|Q0ISP5|Q0ISP5_ORYSJ Os11g0483900 protein OS=Oryza sativa subsp. japonica GN=Os11g0483900 PE=2 SV=1 Length = 250
Score = 123 bits (309), Expect = 9e-27 Identities = 61/122 (50%), Positives = 75/122 (61%) Frame = +3
Query: 285 LVKWVKWFGNFVRRSAFWLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTT 464 L W K S W+ L C C K E+ + ++LTP Sbjct: 6 LALWSKIANEASCGSPRWIGKSLSCVCIKRKGAYER-ICMNLTPVQEERLQRLRHRMKVY 64
Query: 465 FDRTRREHQEALKALWHAAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLF 644 FD +RR+HQEALKALWHA +PD EL+GL+S+QWK+MGWQG DPSTDFRG G++SLENLLF Sbjct: 65 FDPSRRDHQEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLF 124
Query: 645 FA 650 FA Sbjct: 125 FA 126
>tr|Q2R485|Q2R485_ORYSJ Phagocytosis and cell motility protein ELMO1, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g29350 PE=4 SV=2 Length = 285
Score = 122 bits (307), Expect = 1e-26 Identities = 57/105 (54%), Positives = 71/105 (67%) Frame = +3
Query: 336 WLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQEALKALWH 515 W+ L C C K E+ + ++LTP FD +RR+HQEALKALWH Sbjct: 58 WIGKSLSCVCIKRKGAYER-ICMNLTPVQEERLQRLRHRMKVYFDPSRRDHQEALKALWH 116
Query: 516 AAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 A +PD EL+GL+S+QWK+MGWQG DPSTDFRG G++SLENLLFFA Sbjct: 117 ATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFA 161
>tr|B8BKI5|B8BKI5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36117 PE=4 SV=1 Length = 285
Score = 122 bits (307), Expect = 1e-26 Identities = 57/105 (54%), Positives = 71/105 (67%) Frame = +3
Query: 336 WLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQEALKALWH 515 W+ L C C K E+ + ++LTP FD +RR+HQEALKALWH Sbjct: 58 WIGKSLSCVCIKRKGAYER-ICMNLTPVQEERLQRLRHRMKVYFDPSRRDHQEALKALWH 116
Query: 516 AAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 A +PD EL+GL+S+QWK+MGWQG DPSTDFRG G++SLENLLFFA Sbjct: 117 ATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFA 161
>tr|A3CBB0|A3CBB0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032582 PE=4 SV=1 Length = 269
Score = 122 bits (307), Expect = 1e-26 Identities = 57/105 (54%), Positives = 71/105 (67%) Frame = +3
Query: 336 WLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQEALKALWH 515 W+ L C C K E+ + ++LTP FD +RR+HQEALKALWH Sbjct: 58 WIGKSLSCVCIKRKGAYER-ICMNLTPVQEERLQRLRHRMKVYFDPSRRDHQEALKALWH 116
Query: 516 AAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 A +PD EL+GL+S+QWK+MGWQG DPSTDFRG G++SLENLLFFA Sbjct: 117 ATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFA 161
>tr|B4FG34|B4FG34_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 287
Score = 121 bits (304), Expect = 3e-26 Identities = 57/105 (54%), Positives = 70/105 (66%) Frame = +3
Query: 336 WLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQEALKALWH 515 W+ L C C K E+ + ++LTP FD +RR+HQEALKALWH Sbjct: 60 WIGRGLSCVCIKRKGTYER-ICMNLTPVQEERLQRLKHRMKVYFDPSRRDHQEALKALWH 118
Query: 516 AAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 A +PD EL GL+S+QWK+MGWQG DPSTDFRG G++SLENLLFFA Sbjct: 119 ATYPDQELEGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFA 163
>tr|B4G0D5|B4G0D5_MAIZE ELMO domain-containing protein 2 OS=Zea mays PE=2 SV=1 Length = 266
Score = 121 bits (303), Expect = 4e-26 Identities = 58/111 (52%), Positives = 73/111 (65%) Frame = +3
Query: 318 VRRSAFWLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQEA 497 V S W+ L C CA ++ ++ L+ DLTP +D REHQEA Sbjct: 32 VTGSTAWIGRGLSCVCA-QRRDSDARLSFDLTPVQEECLQRLQNRIEVQYDSANREHQEA 90
Query: 498 LKALWHAAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 L++LW A+FP ELRGL+S+QWKEMGWQG DPSTDFRGGG++SLENLL+FA Sbjct: 91 LQSLWCASFPGTELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFA 141
>tr|A2Q1V0|A2Q1V0_MEDTR Engulfment and cell motility, ELM OS=Medicago truncatula GN=MtrDRAFT_AC149129g9v2 PE=4 SV=1 Length = 266
Score = 121 bits (303), Expect = 4e-26 Identities = 58/112 (51%), Positives = 74/112 (66%) Frame = +3
Query: 315 FVRRSAFWLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQE 494 FV S W+ L C CA ++ ++ L+ DLTP +D + EHQ Sbjct: 31 FVTGSTAWIGRGLSCVCA-QRRESDARLSFDLTPYQEECLQRLQSRIDVPYDSSIPEHQA 89
Query: 495 ALKALWHAAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 +L+ALW+AAFP+ EL GL+S+QWK+MGWQG DPSTDFRGGGY+SLENLLFFA Sbjct: 90 SLRALWNAAFPEEELNGLISEQWKDMGWQGKDPSTDFRGGGYISLENLLFFA 141
>tr|B8LNV4|B8LNV4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 264
Score = 120 bits (302), Expect = 6e-26 Identities = 59/108 (54%), Positives = 70/108 (64%) Frame = +3
Query: 327 SAFWLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQEALKA 506 SA W+ L C CA ++ +++ LTP +FD TR +HQEALK Sbjct: 33 SAAWIGRGLSCVCA-QRTSTNDRVSITLTPFEERRLQRLQRRIEASFDGTRSDHQEALKD 91
Query: 507 LWHAAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 LWHAAFP EL L+S+QWKEMGWQG DPSTDFRGGG +SLENLLFFA Sbjct: 92 LWHAAFPGRELHSLISEQWKEMGWQGRDPSTDFRGGGLISLENLLFFA 139
>tr|A7PK87|A7PK87_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019062001 PE=4 SV=1 Length = 267
Score = 120 bits (302), Expect = 6e-26 Identities = 59/111 (53%), Positives = 75/111 (67%) Frame = +3
Query: 318 VRRSAFWLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQEA 497 V SA WL L C CA ++ ++ + DLTP ++D + EHQEA Sbjct: 33 VAGSAAWLGRGLSCVCA-QRRESDARPSFDLTPAQEECLQRLQSRIEVSYDSSISEHQEA 91
Query: 498 LKALWHAAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 L+ALW+A+FP+ ELR L+S+QWKEMGWQG DPSTDFRGGG++SLENLLFFA Sbjct: 92 LRALWNASFPEEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA 142
>tr|A5B879|A5B879_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036799 PE=4 SV=1 Length = 251
Score = 120 bits (302), Expect = 6e-26 Identities = 59/111 (53%), Positives = 75/111 (67%) Frame = +3
Query: 318 VRRSAFWLCNMLLCGCAHEKAHAEKMLTLDLTPXXXXXXXXXXXXXXTTFDRTRREHQEA 497 V SA WL L C CA ++ ++ + DLTP ++D + EHQEA Sbjct: 33 VAGSAAWLGRGLSCVCA-QRRESDARPSFDLTPAQEECLQRLQSRIEVSYDSSISEHQEA 91
Query: 498 LKALWHAAFPDIELRGLVSDQWKEMGWQGNDPSTDFRGGGYVSLENLLFFA 650 L+ALW+A+FP+ ELR L+S+QWKEMGWQG DPSTDFRGGG++SLENLLFFA Sbjct: 92 LRALWNASFPEEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA 142
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