DK963082 |
Clone id |
TST39A01NGRL0015_J07 |
Library |
TST39 |
Length |
590 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_J07. 5' end sequence. |
Accession |
DK963082 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1652Contig1 |
Sequence |
CTTTCTTGATGCTGTTCACATGTGCGCAAGAAAGAGCTGTAAACTTTTTATTGAACCACT TAGATAATGTGCCAAATTGGGGTGATTTACTCCAAATGGTGGTGCTTGATCTCATTAGGA AAGTTTGCAGAACTAAACCTGCTGAGAAGGGGAAATATATCAAGATCATTATTTCCCTTC TAAATTCTTCTTCTACTGCAGTGATGTATGAGTGTGCTGCCACTTTGGTTTCCTTGTCAT CTGCACCCACAGCAATCAGGGCTGCTGCGAACACTTACTGTCAGCTTTTGCTCTCTCAGA GTGATAATAACGTGAAGTTAATAATTTTGGACAGGCTTCAAGAGCTAAAAGCTTCACACA GGGAGGTGATGGTAGAAATGATTATGGATGTTCTTAGGGCCCTGTCAAGCCCAAATCTTG ACATCAAGAGAAAGACCTTGGATATTGCTCTTGAGTTGATCACACCTAGGAACATTGATG AGGTTGTCATGACCCTCAAGAAAGAGGTTGTTAAGACTCAAAACAAGGAACTGGAGAAGA ATGGAGAGTATCGCCAAATGCTGGTGCAGGCAATACACTCATGTGCATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SV20 |
Definition |
sp|Q9SV20|COPB2_ARATH Coatomer subunit beta-2 OS=Arabidopsis thaliana |
Align length |
196 |
Score (bit) |
291.0 |
E-value |
2.0e-78 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963082|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_J07, 5' (590 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SV20|COPB2_ARATH Coatomer subunit beta-2 OS=Arabidopsis tha... 291 2e-78 sp|Q9SV21|COPB1_ARATH Coatomer subunit beta-1 OS=Arabidopsis tha... 290 5e-78 sp|Q0JNK5|COPB2_ORYSJ Coatomer subunit beta-2 OS=Oryza sativa su... 266 4e-71 sp|Q53PC7|COPB1_ORYSJ Coatomer subunit beta-1 OS=Oryza sativa su... 263 6e-70 sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium disc... 221 2e-57 sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=C... 195 1e-49 sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN... 194 2e-49 sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Co... 194 2e-49 sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=CO... 194 3e-49 sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila melanog... 194 3e-49 sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB... 194 3e-49 sp|Q5R922|COPB_PONAB Coatomer subunit beta OS=Pongo abelii GN=CO... 192 8e-49 sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cere... 123 8e-28 sp|Q9UUF7|COPB_SCHPO Coatomer subunit beta OS=Schizosaccharomyce... 111 3e-24 sp|Q8I8U2|AP1G_DICDI AP-1 complex subunit gamma OS=Dictyostelium... 46 1e-04 sp|Q54WN0|AP3D_DICDI AP-3 complex subunit delta OS=Dictyostelium... 42 0.002 sp|O54774|AP3D1_MOUSE AP-3 complex subunit delta-1 OS=Mus muscul... 41 0.004 sp|O14617|AP3D1_HUMAN AP-3 complex subunit delta-1 OS=Homo sapie... 41 0.004 sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus... 41 0.004 sp|P54362|AP3D_DROME AP-3 complex subunit delta OS=Drosophila me... 39 0.025 sp|Q9UPM8|AP4E1_HUMAN AP-4 complex subunit epsilon-1 OS=Homo sap... 37 0.056 sp|Q54VE0|AP4E_DICDI AP-4 complex subunit epsilon OS=Dictyosteli... 35 0.21 sp|Q80V94|AP4E1_MOUSE AP-4 complex subunit epsilon-1 OS=Mus musc... 35 0.28 sp|Q22498|COPG_CAEEL Probable coatomer subunit gamma OS=Caenorha... 33 1.4 sp|Q6P2M8|KCC1B_HUMAN Calcium/calmodulin-dependent protein kinas... 32 2.4 sp|Q2SSE2|Y337_MYCCT UPF0090 protein MCAP_0337 OS=Mycoplasma cap... 32 3.1 sp|P52891|NUP84_YEAST Nucleoporin NUP84 OS=Saccharomyces cerevis... 32 3.1 sp|Q7ZW63|NUF2_DANRE Kinetochore protein Nuf2 OS=Danio rerio GN=... 31 4.0 sp|O70150|KCC1B_RAT Calcium/calmodulin-dependent protein kinase ... 31 4.0 sp|Q9QYK9|KCC1B_MOUSE Calcium/calmodulin-dependent protein kinas... 31 4.0
>sp|Q9SV20|COPB2_ARATH Coatomer subunit beta-2 OS=Arabidopsis thaliana GN=At4g31490 PE=2 SV=2 Length = 948
Score = 291 bits (744), Expect = 2e-78 Identities = 147/196 (75%), Positives = 170/196 (86%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLMLFTCA+ERAVN+LL+++D V +W + LQMVVL+LIR VC+TKPAEKGKY Sbjct: 192 FLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPAEKGKYIKIIISLL 251
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 +AV+YECA TLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLI+LDRL ELK HR Sbjct: 252 SATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILLDRLYELKTLHR 311
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 ++MVE+I+DVLRALSSPNLDI+RKTLDIAL+LIT NI+EVV LKKEVVKTQ+ ELEKN Sbjct: 312 DIMVELIIDVLRALSSPNLDIRRKTLDIALDLITHHNINEVVQMLKKEVVKTQSGELEKN 371
Query: 543 GEYRQMLVQAIHSCAL 590 GEYRQML+QAIH+CA+ Sbjct: 372 GEYRQMLIQAIHACAV 387
>sp|Q9SV21|COPB1_ARATH Coatomer subunit beta-1 OS=Arabidopsis thaliana GN=At4g31480 PE=1 SV=2 Length = 948
Score = 290 bits (741), Expect = 5e-78 Identities = 146/196 (74%), Positives = 170/196 (86%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLMLFTCA+ERAVN+LL+++D V +W + LQMVVL+LIR VC+TKPAEKGKY Sbjct: 192 FLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPAEKGKYIKIIISLL 251
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 +AV+YECA TLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLI+LDRL ELK HR Sbjct: 252 SATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILLDRLYELKTLHR 311
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 ++MVE+I+DVLRALSSPNLDI+RKTLDI+L+LIT NI+EVV LKKEVVKTQ+ ELEKN Sbjct: 312 DIMVELIIDVLRALSSPNLDIRRKTLDISLDLITHHNINEVVQMLKKEVVKTQSGELEKN 371
Query: 543 GEYRQMLVQAIHSCAL 590 GEYRQML+QAIH+CA+ Sbjct: 372 GEYRQMLIQAIHACAV 387
>sp|Q0JNK5|COPB2_ORYSJ Coatomer subunit beta-2 OS=Oryza sativa subsp. japonica GN=Os01g0281400 PE=3 SV=1 Length = 950
Score = 266 bits (681), Expect = 4e-71 Identities = 135/197 (68%), Positives = 162/197 (82%), Gaps = 1/197 (0%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179 FLML TCAQERAV +LL++ D V W DLLQM +DLIRKVCR+ A+KG+Y Sbjct: 192 FLMLCTCAQERAVAYLLSNADRVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIIAL 251
Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359 TAV+YECA LVSLSSAPTA+RAAANTYC+LL SQSDNNVKLI+LDRL EL+ SH Sbjct: 252 LSSPSTAVVYECAGALVSLSSAPTAVRAAANTYCELLSSQSDNNVKLIVLDRLNELRTSH 311
Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539 R+VMV+++MDVLRAL+SPNLD+KRK LD+ L+L+T RN++EVV+ LKKEVVKTQ ELEK Sbjct: 312 RDVMVDVVMDVLRALASPNLDVKRKVLDLVLDLLTARNVEEVVLYLKKEVVKTQAGELEK 371
Query: 540 NGEYRQMLVQAIHSCAL 590 +GEYRQMLVQAIH+CA+ Sbjct: 372 SGEYRQMLVQAIHACAV 388
>sp|Q53PC7|COPB1_ORYSJ Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica GN=Os11g0174000 PE=2 SV=1 Length = 953
Score = 263 bits (671), Expect = 6e-70 Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 1/197 (0%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179 FLML CAQERAV +LL + + V W DLLQM +DLIRKVCR+ A+KG+Y Sbjct: 193 FLMLCACAQERAVAYLLTNAERVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIISL 252
Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359 +AV+YE A LVSLSSAPTA+RAAANTYCQLL SQSDNNVKLI+LDRL EL+ASH Sbjct: 253 LSAPNSAVVYESAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLIVLDRLHELRASH 312
Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539 R+VMV+++MDVLRALSSPN+D++RK LD+ L+L+TPRN++EVVM LKKEVVKTQ +LEK Sbjct: 313 RDVMVDVVMDVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLKKEVVKTQAGDLEK 372
Query: 540 NGEYRQMLVQAIHSCAL 590 GEYRQMLVQAIHSCA+ Sbjct: 373 GGEYRQMLVQAIHSCAV 389
>sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium discoideum GN=copb PE=2 SV=2 Length = 912
Score = 221 bits (564), Expect = 2e-57 Identities = 105/196 (53%), Positives = 149/196 (76%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 F+MLF CA E+AV +L + LD VP++GD+LQ +V++LIRKVC+T P+E+ KY Sbjct: 198 FIMLFNCAPEKAVEYLSSVLDEVPSFGDMLQFIVVELIRKVCKTSPSERSKYIKCIFTLL 257
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 AV YE A TL+SLSSAPTA+R AA+ Y LL ++SDNNVK+I+LD+L E+K +H Sbjct: 258 NSSSPAVKYESAGTLLSLSSAPTAVRGAASAYIDLLCNESDNNVKMIVLDKLIEIKKNHS 317
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 ++M E++MD+LRALSSPN+DI +K L+I L+ +TP+NIDE+++ LKKE+ KTQ+KE +K Sbjct: 318 KIMEELVMDILRALSSPNIDICKKVLNIVLDSVTPKNIDEIILFLKKEINKTQSKEFDKG 377
Query: 543 GEYRQMLVQAIHSCAL 590 EYR +L++ IH +L Sbjct: 378 LEYRHILIRTIHVSSL 393
>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1 Length = 953
Score = 195 bits (496), Expect = 1e-49 Identities = 96/199 (48%), Positives = 144/199 (72%), Gaps = 3/199 (1%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 F+ML Q+RA+++L +D V +GD+LQ+V+++LI KVC P+E+ ++ Sbjct: 194 FMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLL 253
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELK--AS 356 AV YE A TLV+LSSAPTAI+AAA Y L++ +SDNNVKLI+LDRL ELK S Sbjct: 254 QSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPS 313
Query: 357 HREVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQN-KEL 533 H V+ +++MD+LR LS+P+L++++KTL +AL+L++ RN++E+V+ LKKEV+KT N E Sbjct: 314 HERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEH 373
Query: 534 EKNGEYRQMLVQAIHSCAL 590 E +YRQ+LV+ +HSC++ Sbjct: 374 EDTDKYRQLLVRTLHSCSV 392
>sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1 Length = 953
Score = 194 bits (494), Expect = 2e-49 Identities = 95/199 (47%), Positives = 144/199 (72%), Gaps = 3/199 (1%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 F+ML Q+RA+++L +D V +GD+LQ+V+++LI KVC P+E+ ++ Sbjct: 194 FMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLL 253
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELK--AS 356 AV YE A TLV+LSSAPTAI+AAA Y L++ +SDNNVKLI+LDRL ELK + Sbjct: 254 QSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPA 313
Query: 357 HREVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQN-KEL 533 H V+ +++MD+LR LS+P+L++++KTL +AL+L++ RN++E+V+ LKKEV+KT N E Sbjct: 314 HERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEH 373
Query: 534 EKNGEYRQMLVQAIHSCAL 590 E +YRQ+LV+ +HSC++ Sbjct: 374 EDTDKYRQLLVRTLHSCSV 392
>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1 Length = 953
Score = 194 bits (494), Expect = 2e-49 Identities = 95/199 (47%), Positives = 144/199 (72%), Gaps = 3/199 (1%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 F+ML Q+RA+++L +D V +GD+LQ+V+++LI KVC P+E+ ++ Sbjct: 194 FMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLL 253
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELK--AS 356 AV YE A TLV+LSSAPTAI+AAA Y L++ +SDNNVKLI+LDRL ELK + Sbjct: 254 QSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPA 313
Query: 357 HREVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQN-KEL 533 H V+ +++MD+LR LS+P+L++++KTL +AL+L++ RN++E+V+ LKKEV+KT N E Sbjct: 314 HERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEH 373
Query: 534 EKNGEYRQMLVQAIHSCAL 590 E +YRQ+LV+ +HSC++ Sbjct: 374 EDTDKYRQLLVRTLHSCSV 392
>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3 Length = 953
Score = 194 bits (493), Expect = 3e-49 Identities = 95/199 (47%), Positives = 144/199 (72%), Gaps = 3/199 (1%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 F+ML Q+RA+++L +D V +GD+LQ+V+++LI KVC P+E+ ++ Sbjct: 194 FMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLL 253
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELK--AS 356 AV YE A TLV+LSSAPTAI+AAA Y L++ +SDNNVKLI+LDRL ELK + Sbjct: 254 QSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPA 313
Query: 357 HREVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQN-KEL 533 H V+ +++MD+LR LS+P+L++++KTL +AL+L++ RN++E+V+ LKKEV+KT N E Sbjct: 314 HERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEH 373
Query: 534 EKNGEYRQMLVQAIHSCAL 590 E +YRQ+LV+ +HSC++ Sbjct: 374 EDTDKYRQLLVRTLHSCSV 392
>sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=1 SV=2 Length = 964
Score = 194 bits (493), Expect = 3e-49 Identities = 96/198 (48%), Positives = 142/198 (71%), Gaps = 2/198 (1%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLML QERA+N+L + +D V +GD+LQ+V+++LI KVC PAE+ ++ Sbjct: 192 FLMLLHADQERALNYLASCIDQVHTFGDILQLVIVELIYKVCHANPAERSRFIRCIYNLL 251
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH- 359 AV YE A TL++LS APTAI+AAA+ Y +L++ +SDNNVKLI+LDRL +K Sbjct: 252 NSSSNAVRYESAGTLITLSLAPTAIKAAASCYIELVVKESDNNVKLIVLDRLVAMKEHEG 311
Query: 360 -REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELE 536 +VM +++MDVLR L++P+++++RKTL +AL+L+ RNI E+V+ LKKEV KT N E E Sbjct: 312 MEKVMQDLVMDVLRVLAAPDIEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNVEHE 371
Query: 537 KNGEYRQMLVQAIHSCAL 590 G+YRQ+LV+ +H+C++ Sbjct: 372 DTGKYRQLLVRTLHTCSI 389
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5AHP0 |
Definition |
tr|A5AHP0|A5AHP0_VITVI Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis vinifera |
Align length |
196 |
Score (bit) |
313.0 |
E-value |
4.0e-84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963082|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_J07, 5' (590 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5AHP0|A5AHP0_VITVI Putative uncharacterized protein (Chromos... 313 4e-84 tr|A9S1Z1|A9S1Z1_PHYPA Predicted protein OS=Physcomitrella paten... 305 1e-81 tr|A9T5F4|A9T5F4_PHYPA Predicted protein OS=Physcomitrella paten... 301 1e-80 tr|A9TST3|A9TST3_PHYPA Predicted protein OS=Physcomitrella paten... 295 1e-78 tr|A7PVN7|A7PVN7_VITVI Chromosome chr9 scaffold_33, whole genome... 283 5e-75 tr|Q53PC6|Q53PC6_ORYSJ Adaptin N terminal region family protein,... 263 7e-69 tr|B8BJD1|B8BJD1_ORYSI Putative uncharacterized protein OS=Oryza... 263 7e-69 tr|A2WNI6|A2WNI6_ORYSI Putative uncharacterized protein OS=Oryza... 262 1e-68 tr|A4RW30|A4RW30_OSTLU Predicted protein OS=Ostreococcus lucimar... 261 2e-68 tr|Q76LD1|Q76LD1_BOTBR Coatomer subunit beta OS=Botryococcus bra... 261 2e-68 tr|A8JEP9|A8JEP9_CHLRE Beta-cop OS=Chlamydomonas reinhardtii GN=... 257 3e-67 tr|Q01AX1|Q01AX1_OSTTA Coatomer subunit beta (ISS) OS=Ostreococc... 211 2e-53 tr|Q17CI5|Q17CI5_AEDAE Coatomer beta subunit OS=Aedes aegypti GN... 201 3e-50 tr|B0W8M2|B0W8M2_CULQU Coatomer subunit beta OS=Culex quinquefas... 199 7e-50 tr|Q498K6|Q498K6_XENLA MGC114704 protein OS=Xenopus laevis GN=th... 196 6e-49 tr|B5DEA8|B5DEA8_XENTR Putative uncharacterized protein OS=Xenop... 196 6e-49 tr|Q6GNR5|Q6GNR5_XENLA MGC80934 protein OS=Xenopus laevis GN=MGC... 196 8e-49 tr|Q7PXG9|Q7PXG9_ANOGA AGAP001399-PA OS=Anopheles gambiae GN=AGA... 195 1e-48 tr|Q3UE02|Q3UE02_MOUSE Putative uncharacterized protein (Fragmen... 194 2e-48 tr|Q3U8G9|Q3U8G9_MOUSE Putative uncharacterized protein (Fragmen... 194 2e-48 tr|Q3TT72|Q3TT72_MOUSE Putative uncharacterized protein (Fragmen... 194 2e-48 tr|Q3T9Y4|Q3T9Y4_MOUSE Putative uncharacterized protein OS=Mus m... 194 2e-48 tr|B4MSN9|B4MSN9_DROWI GK19864 OS=Drosophila willistoni GN=GK198... 194 2e-48 tr|B4Q2X6|B4Q2X6_DROYA GE15534 OS=Drosophila yakuba GN=GE15534 P... 194 3e-48 tr|B3NTD2|B3NTD2_DROER GG18127 OS=Drosophila erecta GN=GG18127 P... 194 3e-48 tr|B3MWK4|B3MWK4_DROAN GF22509 OS=Drosophila ananassae GN=GF2250... 194 3e-48 tr|B4L3P9|B4L3P9_DROMO GI15599 OS=Drosophila mojavensis GN=GI155... 194 4e-48 tr|B4I6R7|B4I6R7_DROSE GM22820 OS=Drosophila sechellia GN=GM2282... 193 5e-48 tr|Q29G21|Q29G21_DROPS GA19453 OS=Drosophila pseudoobscura pseud... 192 9e-48 tr|B4H7J5|B4H7J5_DROPE GL27037 OS=Drosophila persimilis GN=GL270... 192 9e-48
>tr|A5AHP0|A5AHP0_VITVI Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00032317001 PE=4 SV=1 Length = 948
Score = 313 bits (803), Expect = 4e-84 Identities = 157/196 (80%), Positives = 174/196 (88%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLMLFTCAQ+RA+N+LL H+D VP WG+LLQMVVL+LIRKVCRT EKGKY Sbjct: 192 FLMLFTCAQDRAINYLLTHVDRVPEWGELLQMVVLELIRKVCRTNRGEKGKYIKIIISLL 251
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 TAV+YECA TLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLI+LDRL ELK+SHR Sbjct: 252 NAPSTAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVLDRLNELKSSHR 311
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 E+MV+MIMDVLRALSSPNLDI+RKTLDI LELITPRNI+EVV+TLKKEVVKTQ+ ELEKN Sbjct: 312 EIMVDMIMDVLRALSSPNLDIRRKTLDIVLELITPRNINEVVLTLKKEVVKTQSGELEKN 371
Query: 543 GEYRQMLVQAIHSCAL 590 GEYRQML+QAIHSCA+ Sbjct: 372 GEYRQMLIQAIHSCAI 387
>tr|A9S1Z1|A9S1Z1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162358 PE=4 SV=1 Length = 953
Score = 305 bits (781), Expect = 1e-81 Identities = 156/196 (79%), Positives = 169/196 (86%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLML+TCAQ+RAVN+LLNHL+NV +WGD+LQMVVLDL+RKVCR P EKGKY Sbjct: 192 FLMLYTCAQDRAVNYLLNHLENVSSWGDILQMVVLDLVRKVCRLNPDEKGKYMKIVILLL 251
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 AV YE A LVSLSSAPTAIRAA N YCQLLLSQSDNNVKLIILDRL ELKA+HR Sbjct: 252 SSTSAAVSYESAGALVSLSSAPTAIRAAGNCYCQLLLSQSDNNVKLIILDRLTELKAAHR 311
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 E+MVEM+MDVLRALSSPNLDI+RKTLDIAL+LITPRNIDEVVMTLKKEVVKTQ ELEK Sbjct: 312 EIMVEMVMDVLRALSSPNLDIRRKTLDIALDLITPRNIDEVVMTLKKEVVKTQTMELEKC 371
Query: 543 GEYRQMLVQAIHSCAL 590 GEYRQMLVQAIH+CAL Sbjct: 372 GEYRQMLVQAIHACAL 387
>tr|A9T5F4|A9T5F4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219059 PE=4 SV=1 Length = 961
Score = 301 bits (772), Expect = 1e-80 Identities = 157/196 (80%), Positives = 171/196 (87%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLMLF AQERAVN+LL+HLD+V WGD LQMVVL+LIRKVCRT PA KGKY Sbjct: 192 FLMLFNHAQERAVNYLLSHLDSVATWGDTLQMVVLELIRKVCRTNPAMKGKYIKIIVSLL 251
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 TAVMYE A TLVSLSSAPTAIRAAANTYCQLL +QSDNNVKLI+LDRLQELKAS+R Sbjct: 252 SSQHTAVMYESAGTLVSLSSAPTAIRAAANTYCQLLQTQSDNNVKLIVLDRLQELKASYR 311
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 E+MVE+IMDVLRALSSPNLDI++KTLDIA++L T RNIDEVVM+LKKEVVKTQN ELEKN Sbjct: 312 EIMVEVIMDVLRALSSPNLDIRKKTLDIAMDLTTLRNIDEVVMSLKKEVVKTQNAELEKN 371
Query: 543 GEYRQMLVQAIHSCAL 590 GEYRQMLVQAIHSCAL Sbjct: 372 GEYRQMLVQAIHSCAL 387
>tr|A9TST3|A9TST3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225075 PE=4 SV=1 Length = 956
Score = 295 bits (756), Expect = 1e-78 Identities = 151/196 (77%), Positives = 166/196 (84%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLMLF CAQERAV +LL HLD V +WGD QMVVL+LIRKVCRT P KG+Y Sbjct: 195 FLMLFNCAQERAVAYLLGHLDKVSSWGDTFQMVVLELIRKVCRTNPEVKGRYIKIIVSLL 254
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 AVMYE A TLVSLSSAPTA+RAAAN YCQLL +QSDNNVKLI+LDRLQELK SHR Sbjct: 255 SSQYAAVMYESAGTLVSLSSAPTAVRAAANAYCQLLQTQSDNNVKLIVLDRLQELKTSHR 314
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 EVM+E+IMDVLRALSSPNLDI++KTLDIA++L+T RNIDEVVMTLKKEVVKTQN +LEKN Sbjct: 315 EVMMEVIMDVLRALSSPNLDIRKKTLDIAMDLVTLRNIDEVVMTLKKEVVKTQNGDLEKN 374
Query: 543 GEYRQMLVQAIHSCAL 590 GEYRQMLVQAIHSCAL Sbjct: 375 GEYRQMLVQAIHSCAL 390
>tr|A7PVN7|A7PVN7_VITVI Chromosome chr9 scaffold_33, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025293001 PE=4 SV=1 Length = 949
Score = 283 bits (724), Expect = 5e-75 Identities = 141/196 (71%), Positives = 168/196 (85%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLMLF CAQ +AV+++ +++D VP+W + +QMVVL+LI+KVCRT EKGKY Sbjct: 192 FLMLFNCAQFKAVDYVFSNIDRVPDWDEQMQMVVLELIKKVCRTNKDEKGKYIKIIISLL 251
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 TAV+YECA TL+SLSSAPTAIRAAANTYCQLLLSQSDNNVKLI+LDRL ELK+ HR Sbjct: 252 NSPLTAVIYECANTLMSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVLDRLNELKSLHR 311
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 V+VEMIMDVLRALSSP+LDI+RKT+DIAL+LITP+N+DEVV+ LKKEVVKTQ+ ELEKN Sbjct: 312 GVVVEMIMDVLRALSSPSLDIRRKTIDIALDLITPKNVDEVVLVLKKEVVKTQSVELEKN 371
Query: 543 GEYRQMLVQAIHSCAL 590 GEYRQML+Q IHSCA+ Sbjct: 372 GEYRQMLIQGIHSCAI 387
>tr|Q53PC6|Q53PC6_ORYSJ Adaptin N terminal region family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g07280 PE=4 SV=1 Length = 885
Score = 263 bits (671), Expect = 7e-69 Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 1/197 (0%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179 FLML CAQERAV +LL + + V W DLLQM +DLIRKVCR+ A+KG+Y Sbjct: 193 FLMLCACAQERAVAYLLTNAERVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIISL 252
Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359 +AV+YE A LVSLSSAPTA+RAAANTYCQLL SQSDNNVKLI+LDRL EL+ASH Sbjct: 253 LSAPNSAVVYESAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLIVLDRLHELRASH 312
Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539 R+VMV+++MDVLRALSSPN+D++RK LD+ L+L+TPRN++EVVM LKKEVVKTQ +LEK Sbjct: 313 RDVMVDVVMDVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLKKEVVKTQAGDLEK 372
Query: 540 NGEYRQMLVQAIHSCAL 590 GEYRQMLVQAIHSCA+ Sbjct: 373 GGEYRQMLVQAIHSCAV 389
>tr|B8BJD1|B8BJD1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35302 PE=4 SV=1 Length = 950
Score = 263 bits (671), Expect = 7e-69 Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 1/197 (0%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179 FLML CAQERAV +LL + + V W DLLQM +DLIRKVCR+ A+KG+Y Sbjct: 190 FLMLCACAQERAVAYLLTNAERVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIISL 249
Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359 +AV+YE A LVSLSSAPTA+RAAANTYCQLL SQSDNNVKLI+LDRL EL+ASH Sbjct: 250 LSAPNSAVVYESAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLIVLDRLHELRASH 309
Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539 R+VMV+++MDVLRALSSPN+D++RK LD+ L+L+TPRN++EVVM LKKEVVKTQ +LEK Sbjct: 310 RDVMVDVVMDVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLKKEVVKTQAGDLEK 369
Query: 540 NGEYRQMLVQAIHSCAL 590 GEYRQMLVQAIHSCA+ Sbjct: 370 GGEYRQMLVQAIHSCAV 386
>tr|A2WNI6|A2WNI6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01415 PE=4 SV=1 Length = 950
Score = 262 bits (669), Expect = 1e-68 Identities = 133/197 (67%), Positives = 160/197 (81%), Gaps = 1/197 (0%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179 FLML TCAQERAV +LL++ D V W DLLQM +DLIRKVCR+ A+KG+Y Sbjct: 192 FLMLCTCAQERAVAYLLSNADRVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIIAL 251
Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359 TAV+YECA L SLSSAPTA+RAAANTYC+LL SQSDNNVKLI+LDRL EL+ SH Sbjct: 252 LSSPSTAVVYECAGALESLSSAPTAVRAAANTYCELLSSQSDNNVKLIVLDRLNELRTSH 311
Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539 R+VMV+++MDVLRAL+SPN D+KRK LD+ L+L+T RN++EVV+ LKKEVVKTQ ELEK Sbjct: 312 RDVMVDVVMDVLRALASPNSDVKRKVLDLVLDLLTARNVEEVVLYLKKEVVKTQAGELEK 371
Query: 540 NGEYRQMLVQAIHSCAL 590 +GEYRQMLVQAIH+CA+ Sbjct: 372 SGEYRQMLVQAIHACAV 388
>tr|A4RW30|A4RW30_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_49385 PE=4 SV=1 Length = 936
Score = 261 bits (668), Expect = 2e-68 Identities = 127/196 (64%), Positives = 161/196 (82%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 FLML+T AQERAVN+L+N+L++V NWGD+LQ VVLDLIRKVCR+ P +KGKY Sbjct: 198 FLMLYTHAQERAVNYLMNNLESVSNWGDILQTVVLDLIRKVCRSDPTQKGKYIKVILMLL 257
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 +V+YECA TLV+LS+APTAI+AAAN YCQLL++QSDNNVKLI+LDRL +LK ++ Sbjct: 258 GTNNASVVYECANTLVALSNAPTAIKAAANCYCQLLVNQSDNNVKLIVLDRLTDLKKDNK 317
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 E++ MIMD+LRA+SSPN+DIKRKTLD+ L+LITPRNID+V LK EV+K+Q++ + Sbjct: 318 ELLQAMIMDILRAISSPNIDIKRKTLDLVLDLITPRNIDDVTSMLKTEVIKSQSENTSET 377
Query: 543 GEYRQMLVQAIHSCAL 590 GEYRQ+LVQAIH CAL Sbjct: 378 GEYRQLLVQAIHKCAL 393
>tr|Q76LD1|Q76LD1_BOTBR Coatomer subunit beta OS=Botryococcus braunii GN=bCOP PE=2 SV=1 Length = 947
Score = 261 bits (667), Expect = 2e-68 Identities = 135/196 (68%), Positives = 155/196 (79%) Frame = +3
Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182 F L AQ+ AVN+LL D+V GDL+Q+ VLDLIRKVCRT P EKGKY Sbjct: 194 FQFLCNHAQDLAVNWLLGVADSVGQMGDLMQIAVLDLIRKVCRTNPGEKGKYIKIILALL 253
Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362 AVMYECA TLVSLS APTAIRAAAN YCQLL+S SDNNV+LI+LDRLQELK HR Sbjct: 254 QSTSAAVMYECAVTLVSLSQAPTAIRAAANCYCQLLVSHSDNNVRLIVLDRLQELKDKHR 313
Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542 EVM EM+MDVLRAL++PN+DI++K LDI+L+LIT RNIDEVV LKKEV+KTQ+KELEK Sbjct: 314 EVMTEMLMDVLRALAAPNMDIRKKALDISLDLITQRNIDEVVQLLKKEVMKTQSKELEKG 373
Query: 543 GEYRQMLVQAIHSCAL 590 EYRQ+LVQAIHSCA+ Sbjct: 374 AEYRQLLVQAIHSCAV 389
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