DK963082
Clone id TST39A01NGRL0015_J07
Library
Length 590
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_J07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTTTCTTGATGCTGTTCACATGTGCGCAAGAAAGAGCTGTAAACTTTTTATTGAACCACT
TAGATAATGTGCCAAATTGGGGTGATTTACTCCAAATGGTGGTGCTTGATCTCATTAGGA
AAGTTTGCAGAACTAAACCTGCTGAGAAGGGGAAATATATCAAGATCATTATTTCCCTTC
TAAATTCTTCTTCTACTGCAGTGATGTATGAGTGTGCTGCCACTTTGGTTTCCTTGTCAT
CTGCACCCACAGCAATCAGGGCTGCTGCGAACACTTACTGTCAGCTTTTGCTCTCTCAGA
GTGATAATAACGTGAAGTTAATAATTTTGGACAGGCTTCAAGAGCTAAAAGCTTCACACA
GGGAGGTGATGGTAGAAATGATTATGGATGTTCTTAGGGCCCTGTCAAGCCCAAATCTTG
ACATCAAGAGAAAGACCTTGGATATTGCTCTTGAGTTGATCACACCTAGGAACATTGATG
AGGTTGTCATGACCCTCAAGAAAGAGGTTGTTAAGACTCAAAACAAGGAACTGGAGAAGA
ATGGAGAGTATCGCCAAATGCTGGTGCAGGCAATACACTCATGTGCATTG
■■Homology search results ■■ -
sp_hit_id Q9SV20
Definition sp|Q9SV20|COPB2_ARATH Coatomer subunit beta-2 OS=Arabidopsis thaliana
Align length 196
Score (bit) 291.0
E-value 2.0e-78
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963082|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_J07, 5'
(590 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SV20|COPB2_ARATH Coatomer subunit beta-2 OS=Arabidopsis tha... 291 2e-78
sp|Q9SV21|COPB1_ARATH Coatomer subunit beta-1 OS=Arabidopsis tha... 290 5e-78
sp|Q0JNK5|COPB2_ORYSJ Coatomer subunit beta-2 OS=Oryza sativa su... 266 4e-71
sp|Q53PC7|COPB1_ORYSJ Coatomer subunit beta-1 OS=Oryza sativa su... 263 6e-70
sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium disc... 221 2e-57
sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=C... 195 1e-49
sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN... 194 2e-49
sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Co... 194 2e-49
sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=CO... 194 3e-49
sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila melanog... 194 3e-49
sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB... 194 3e-49
sp|Q5R922|COPB_PONAB Coatomer subunit beta OS=Pongo abelii GN=CO... 192 8e-49
sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cere... 123 8e-28
sp|Q9UUF7|COPB_SCHPO Coatomer subunit beta OS=Schizosaccharomyce... 111 3e-24
sp|Q8I8U2|AP1G_DICDI AP-1 complex subunit gamma OS=Dictyostelium... 46 1e-04
sp|Q54WN0|AP3D_DICDI AP-3 complex subunit delta OS=Dictyostelium... 42 0.002
sp|O54774|AP3D1_MOUSE AP-3 complex subunit delta-1 OS=Mus muscul... 41 0.004
sp|O14617|AP3D1_HUMAN AP-3 complex subunit delta-1 OS=Homo sapie... 41 0.004
sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus... 41 0.004
sp|P54362|AP3D_DROME AP-3 complex subunit delta OS=Drosophila me... 39 0.025
sp|Q9UPM8|AP4E1_HUMAN AP-4 complex subunit epsilon-1 OS=Homo sap... 37 0.056
sp|Q54VE0|AP4E_DICDI AP-4 complex subunit epsilon OS=Dictyosteli... 35 0.21
sp|Q80V94|AP4E1_MOUSE AP-4 complex subunit epsilon-1 OS=Mus musc... 35 0.28
sp|Q22498|COPG_CAEEL Probable coatomer subunit gamma OS=Caenorha... 33 1.4
sp|Q6P2M8|KCC1B_HUMAN Calcium/calmodulin-dependent protein kinas... 32 2.4
sp|Q2SSE2|Y337_MYCCT UPF0090 protein MCAP_0337 OS=Mycoplasma cap... 32 3.1
sp|P52891|NUP84_YEAST Nucleoporin NUP84 OS=Saccharomyces cerevis... 32 3.1
sp|Q7ZW63|NUF2_DANRE Kinetochore protein Nuf2 OS=Danio rerio GN=... 31 4.0
sp|O70150|KCC1B_RAT Calcium/calmodulin-dependent protein kinase ... 31 4.0
sp|Q9QYK9|KCC1B_MOUSE Calcium/calmodulin-dependent protein kinas... 31 4.0

>sp|Q9SV20|COPB2_ARATH Coatomer subunit beta-2 OS=Arabidopsis
thaliana GN=At4g31490 PE=2 SV=2
Length = 948

Score = 291 bits (744), Expect = 2e-78
Identities = 147/196 (75%), Positives = 170/196 (86%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLMLFTCA+ERAVN+LL+++D V +W + LQMVVL+LIR VC+TKPAEKGKY
Sbjct: 192 FLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPAEKGKYIKIIISLL 251

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
+AV+YECA TLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLI+LDRL ELK HR
Sbjct: 252 SATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILLDRLYELKTLHR 311

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
++MVE+I+DVLRALSSPNLDI+RKTLDIAL+LIT NI+EVV LKKEVVKTQ+ ELEKN
Sbjct: 312 DIMVELIIDVLRALSSPNLDIRRKTLDIALDLITHHNINEVVQMLKKEVVKTQSGELEKN 371

Query: 543 GEYRQMLVQAIHSCAL 590
GEYRQML+QAIH+CA+
Sbjct: 372 GEYRQMLIQAIHACAV 387


>sp|Q9SV21|COPB1_ARATH Coatomer subunit beta-1 OS=Arabidopsis
thaliana GN=At4g31480 PE=1 SV=2
Length = 948

Score = 290 bits (741), Expect = 5e-78
Identities = 146/196 (74%), Positives = 170/196 (86%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLMLFTCA+ERAVN+LL+++D V +W + LQMVVL+LIR VC+TKPAEKGKY
Sbjct: 192 FLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPAEKGKYIKIIISLL 251

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
+AV+YECA TLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLI+LDRL ELK HR
Sbjct: 252 SATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILLDRLYELKTLHR 311

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
++MVE+I+DVLRALSSPNLDI+RKTLDI+L+LIT NI+EVV LKKEVVKTQ+ ELEKN
Sbjct: 312 DIMVELIIDVLRALSSPNLDIRRKTLDISLDLITHHNINEVVQMLKKEVVKTQSGELEKN 371

Query: 543 GEYRQMLVQAIHSCAL 590
GEYRQML+QAIH+CA+
Sbjct: 372 GEYRQMLIQAIHACAV 387


>sp|Q0JNK5|COPB2_ORYSJ Coatomer subunit beta-2 OS=Oryza sativa
subsp. japonica GN=Os01g0281400 PE=3 SV=1
Length = 950

Score = 266 bits (681), Expect = 4e-71
Identities = 135/197 (68%), Positives = 162/197 (82%), Gaps = 1/197 (0%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179
FLML TCAQERAV +LL++ D V W DLLQM +DLIRKVCR+ A+KG+Y
Sbjct: 192 FLMLCTCAQERAVAYLLSNADRVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIIAL 251

Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359
TAV+YECA LVSLSSAPTA+RAAANTYC+LL SQSDNNVKLI+LDRL EL+ SH
Sbjct: 252 LSSPSTAVVYECAGALVSLSSAPTAVRAAANTYCELLSSQSDNNVKLIVLDRLNELRTSH 311

Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539
R+VMV+++MDVLRAL+SPNLD+KRK LD+ L+L+T RN++EVV+ LKKEVVKTQ ELEK
Sbjct: 312 RDVMVDVVMDVLRALASPNLDVKRKVLDLVLDLLTARNVEEVVLYLKKEVVKTQAGELEK 371

Query: 540 NGEYRQMLVQAIHSCAL 590
+GEYRQMLVQAIH+CA+
Sbjct: 372 SGEYRQMLVQAIHACAV 388


>sp|Q53PC7|COPB1_ORYSJ Coatomer subunit beta-1 OS=Oryza sativa
subsp. japonica GN=Os11g0174000 PE=2 SV=1
Length = 953

Score = 263 bits (671), Expect = 6e-70
Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 1/197 (0%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179
FLML CAQERAV +LL + + V W DLLQM +DLIRKVCR+ A+KG+Y
Sbjct: 193 FLMLCACAQERAVAYLLTNAERVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIISL 252

Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359
+AV+YE A LVSLSSAPTA+RAAANTYCQLL SQSDNNVKLI+LDRL EL+ASH
Sbjct: 253 LSAPNSAVVYESAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLIVLDRLHELRASH 312

Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539
R+VMV+++MDVLRALSSPN+D++RK LD+ L+L+TPRN++EVVM LKKEVVKTQ +LEK
Sbjct: 313 RDVMVDVVMDVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLKKEVVKTQAGDLEK 372

Query: 540 NGEYRQMLVQAIHSCAL 590
GEYRQMLVQAIHSCA+
Sbjct: 373 GGEYRQMLVQAIHSCAV 389


>sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium
discoideum GN=copb PE=2 SV=2
Length = 912

Score = 221 bits (564), Expect = 2e-57
Identities = 105/196 (53%), Positives = 149/196 (76%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
F+MLF CA E+AV +L + LD VP++GD+LQ +V++LIRKVC+T P+E+ KY
Sbjct: 198 FIMLFNCAPEKAVEYLSSVLDEVPSFGDMLQFIVVELIRKVCKTSPSERSKYIKCIFTLL 257

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
AV YE A TL+SLSSAPTA+R AA+ Y LL ++SDNNVK+I+LD+L E+K +H
Sbjct: 258 NSSSPAVKYESAGTLLSLSSAPTAVRGAASAYIDLLCNESDNNVKMIVLDKLIEIKKNHS 317

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
++M E++MD+LRALSSPN+DI +K L+I L+ +TP+NIDE+++ LKKE+ KTQ+KE +K
Sbjct: 318 KIMEELVMDILRALSSPNIDICKKVLNIVLDSVTPKNIDEIILFLKKEINKTQSKEFDKG 377

Query: 543 GEYRQMLVQAIHSCAL 590
EYR +L++ IH +L
Sbjct: 378 LEYRHILIRTIHVSSL 393


>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus
GN=COPB1 PE=2 SV=1
Length = 953

Score = 195 bits (496), Expect = 1e-49
Identities = 96/199 (48%), Positives = 144/199 (72%), Gaps = 3/199 (1%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
F+ML Q+RA+++L +D V +GD+LQ+V+++LI KVC P+E+ ++
Sbjct: 194 FMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLL 253

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELK--AS 356
AV YE A TLV+LSSAPTAI+AAA Y L++ +SDNNVKLI+LDRL ELK S
Sbjct: 254 QSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPS 313

Query: 357 HREVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQN-KEL 533
H V+ +++MD+LR LS+P+L++++KTL +AL+L++ RN++E+V+ LKKEV+KT N E
Sbjct: 314 HERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEH 373

Query: 534 EKNGEYRQMLVQAIHSCAL 590
E +YRQ+LV+ +HSC++
Sbjct: 374 EDTDKYRQLLVRTLHSCSV 392


>sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus
GN=Copb1 PE=1 SV=1
Length = 953

Score = 194 bits (494), Expect = 2e-49
Identities = 95/199 (47%), Positives = 144/199 (72%), Gaps = 3/199 (1%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
F+ML Q+RA+++L +D V +GD+LQ+V+++LI KVC P+E+ ++
Sbjct: 194 FMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLL 253

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELK--AS 356
AV YE A TLV+LSSAPTAI+AAA Y L++ +SDNNVKLI+LDRL ELK +
Sbjct: 254 QSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPA 313

Query: 357 HREVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQN-KEL 533
H V+ +++MD+LR LS+P+L++++KTL +AL+L++ RN++E+V+ LKKEV+KT N E
Sbjct: 314 HERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEH 373

Query: 534 EKNGEYRQMLVQAIHSCAL 590
E +YRQ+LV+ +HSC++
Sbjct: 374 EDTDKYRQLLVRTLHSCSV 392


>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1
PE=1 SV=1
Length = 953

Score = 194 bits (494), Expect = 2e-49
Identities = 95/199 (47%), Positives = 144/199 (72%), Gaps = 3/199 (1%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
F+ML Q+RA+++L +D V +GD+LQ+V+++LI KVC P+E+ ++
Sbjct: 194 FMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLL 253

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELK--AS 356
AV YE A TLV+LSSAPTAI+AAA Y L++ +SDNNVKLI+LDRL ELK +
Sbjct: 254 QSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPA 313

Query: 357 HREVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQN-KEL 533
H V+ +++MD+LR LS+P+L++++KTL +AL+L++ RN++E+V+ LKKEV+KT N E
Sbjct: 314 HERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEH 373

Query: 534 EKNGEYRQMLVQAIHSCAL 590
E +YRQ+LV+ +HSC++
Sbjct: 374 EDTDKYRQLLVRTLHSCSV 392


>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1
PE=1 SV=3
Length = 953

Score = 194 bits (493), Expect = 3e-49
Identities = 95/199 (47%), Positives = 144/199 (72%), Gaps = 3/199 (1%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
F+ML Q+RA+++L +D V +GD+LQ+V+++LI KVC P+E+ ++
Sbjct: 194 FMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLL 253

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELK--AS 356
AV YE A TLV+LSSAPTAI+AAA Y L++ +SDNNVKLI+LDRL ELK +
Sbjct: 254 QSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPA 313

Query: 357 HREVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQN-KEL 533
H V+ +++MD+LR LS+P+L++++KTL +AL+L++ RN++E+V+ LKKEV+KT N E
Sbjct: 314 HERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEH 373

Query: 534 EKNGEYRQMLVQAIHSCAL 590
E +YRQ+LV+ +HSC++
Sbjct: 374 EDTDKYRQLLVRTLHSCSV 392


>sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila
melanogaster GN=betaCop PE=1 SV=2
Length = 964

Score = 194 bits (493), Expect = 3e-49
Identities = 96/198 (48%), Positives = 142/198 (71%), Gaps = 2/198 (1%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLML QERA+N+L + +D V +GD+LQ+V+++LI KVC PAE+ ++
Sbjct: 192 FLMLLHADQERALNYLASCIDQVHTFGDILQLVIVELIYKVCHANPAERSRFIRCIYNLL 251

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH- 359
AV YE A TL++LS APTAI+AAA+ Y +L++ +SDNNVKLI+LDRL +K
Sbjct: 252 NSSSNAVRYESAGTLITLSLAPTAIKAAASCYIELVVKESDNNVKLIVLDRLVAMKEHEG 311

Query: 360 -REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELE 536
+VM +++MDVLR L++P+++++RKTL +AL+L+ RNI E+V+ LKKEV KT N E E
Sbjct: 312 MEKVMQDLVMDVLRVLAAPDIEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNVEHE 371

Query: 537 KNGEYRQMLVQAIHSCAL 590
G+YRQ+LV+ +H+C++
Sbjct: 372 DTGKYRQLLVRTLHTCSI 389


tr_hit_id A5AHP0
Definition tr|A5AHP0|A5AHP0_VITVI Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis vinifera
Align length 196
Score (bit) 313.0
E-value 4.0e-84
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963082|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_J07, 5'
(590 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5AHP0|A5AHP0_VITVI Putative uncharacterized protein (Chromos... 313 4e-84
tr|A9S1Z1|A9S1Z1_PHYPA Predicted protein OS=Physcomitrella paten... 305 1e-81
tr|A9T5F4|A9T5F4_PHYPA Predicted protein OS=Physcomitrella paten... 301 1e-80
tr|A9TST3|A9TST3_PHYPA Predicted protein OS=Physcomitrella paten... 295 1e-78
tr|A7PVN7|A7PVN7_VITVI Chromosome chr9 scaffold_33, whole genome... 283 5e-75
tr|Q53PC6|Q53PC6_ORYSJ Adaptin N terminal region family protein,... 263 7e-69
tr|B8BJD1|B8BJD1_ORYSI Putative uncharacterized protein OS=Oryza... 263 7e-69
tr|A2WNI6|A2WNI6_ORYSI Putative uncharacterized protein OS=Oryza... 262 1e-68
tr|A4RW30|A4RW30_OSTLU Predicted protein OS=Ostreococcus lucimar... 261 2e-68
tr|Q76LD1|Q76LD1_BOTBR Coatomer subunit beta OS=Botryococcus bra... 261 2e-68
tr|A8JEP9|A8JEP9_CHLRE Beta-cop OS=Chlamydomonas reinhardtii GN=... 257 3e-67
tr|Q01AX1|Q01AX1_OSTTA Coatomer subunit beta (ISS) OS=Ostreococc... 211 2e-53
tr|Q17CI5|Q17CI5_AEDAE Coatomer beta subunit OS=Aedes aegypti GN... 201 3e-50
tr|B0W8M2|B0W8M2_CULQU Coatomer subunit beta OS=Culex quinquefas... 199 7e-50
tr|Q498K6|Q498K6_XENLA MGC114704 protein OS=Xenopus laevis GN=th... 196 6e-49
tr|B5DEA8|B5DEA8_XENTR Putative uncharacterized protein OS=Xenop... 196 6e-49
tr|Q6GNR5|Q6GNR5_XENLA MGC80934 protein OS=Xenopus laevis GN=MGC... 196 8e-49
tr|Q7PXG9|Q7PXG9_ANOGA AGAP001399-PA OS=Anopheles gambiae GN=AGA... 195 1e-48
tr|Q3UE02|Q3UE02_MOUSE Putative uncharacterized protein (Fragmen... 194 2e-48
tr|Q3U8G9|Q3U8G9_MOUSE Putative uncharacterized protein (Fragmen... 194 2e-48
tr|Q3TT72|Q3TT72_MOUSE Putative uncharacterized protein (Fragmen... 194 2e-48
tr|Q3T9Y4|Q3T9Y4_MOUSE Putative uncharacterized protein OS=Mus m... 194 2e-48
tr|B4MSN9|B4MSN9_DROWI GK19864 OS=Drosophila willistoni GN=GK198... 194 2e-48
tr|B4Q2X6|B4Q2X6_DROYA GE15534 OS=Drosophila yakuba GN=GE15534 P... 194 3e-48
tr|B3NTD2|B3NTD2_DROER GG18127 OS=Drosophila erecta GN=GG18127 P... 194 3e-48
tr|B3MWK4|B3MWK4_DROAN GF22509 OS=Drosophila ananassae GN=GF2250... 194 3e-48
tr|B4L3P9|B4L3P9_DROMO GI15599 OS=Drosophila mojavensis GN=GI155... 194 4e-48
tr|B4I6R7|B4I6R7_DROSE GM22820 OS=Drosophila sechellia GN=GM2282... 193 5e-48
tr|Q29G21|Q29G21_DROPS GA19453 OS=Drosophila pseudoobscura pseud... 192 9e-48
tr|B4H7J5|B4H7J5_DROPE GL27037 OS=Drosophila persimilis GN=GL270... 192 9e-48

>tr|A5AHP0|A5AHP0_VITVI Putative uncharacterized protein (Chromosome
chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00032317001 PE=4 SV=1
Length = 948

Score = 313 bits (803), Expect = 4e-84
Identities = 157/196 (80%), Positives = 174/196 (88%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLMLFTCAQ+RA+N+LL H+D VP WG+LLQMVVL+LIRKVCRT EKGKY
Sbjct: 192 FLMLFTCAQDRAINYLLTHVDRVPEWGELLQMVVLELIRKVCRTNRGEKGKYIKIIISLL 251

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
TAV+YECA TLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLI+LDRL ELK+SHR
Sbjct: 252 NAPSTAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVLDRLNELKSSHR 311

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
E+MV+MIMDVLRALSSPNLDI+RKTLDI LELITPRNI+EVV+TLKKEVVKTQ+ ELEKN
Sbjct: 312 EIMVDMIMDVLRALSSPNLDIRRKTLDIVLELITPRNINEVVLTLKKEVVKTQSGELEKN 371

Query: 543 GEYRQMLVQAIHSCAL 590
GEYRQML+QAIHSCA+
Sbjct: 372 GEYRQMLIQAIHSCAI 387


>tr|A9S1Z1|A9S1Z1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_162358 PE=4 SV=1
Length = 953

Score = 305 bits (781), Expect = 1e-81
Identities = 156/196 (79%), Positives = 169/196 (86%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLML+TCAQ+RAVN+LLNHL+NV +WGD+LQMVVLDL+RKVCR P EKGKY
Sbjct: 192 FLMLYTCAQDRAVNYLLNHLENVSSWGDILQMVVLDLVRKVCRLNPDEKGKYMKIVILLL 251

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
AV YE A LVSLSSAPTAIRAA N YCQLLLSQSDNNVKLIILDRL ELKA+HR
Sbjct: 252 SSTSAAVSYESAGALVSLSSAPTAIRAAGNCYCQLLLSQSDNNVKLIILDRLTELKAAHR 311

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
E+MVEM+MDVLRALSSPNLDI+RKTLDIAL+LITPRNIDEVVMTLKKEVVKTQ ELEK
Sbjct: 312 EIMVEMVMDVLRALSSPNLDIRRKTLDIALDLITPRNIDEVVMTLKKEVVKTQTMELEKC 371

Query: 543 GEYRQMLVQAIHSCAL 590
GEYRQMLVQAIH+CAL
Sbjct: 372 GEYRQMLVQAIHACAL 387


>tr|A9T5F4|A9T5F4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219059 PE=4 SV=1
Length = 961

Score = 301 bits (772), Expect = 1e-80
Identities = 157/196 (80%), Positives = 171/196 (87%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLMLF AQERAVN+LL+HLD+V WGD LQMVVL+LIRKVCRT PA KGKY
Sbjct: 192 FLMLFNHAQERAVNYLLSHLDSVATWGDTLQMVVLELIRKVCRTNPAMKGKYIKIIVSLL 251

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
TAVMYE A TLVSLSSAPTAIRAAANTYCQLL +QSDNNVKLI+LDRLQELKAS+R
Sbjct: 252 SSQHTAVMYESAGTLVSLSSAPTAIRAAANTYCQLLQTQSDNNVKLIVLDRLQELKASYR 311

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
E+MVE+IMDVLRALSSPNLDI++KTLDIA++L T RNIDEVVM+LKKEVVKTQN ELEKN
Sbjct: 312 EIMVEVIMDVLRALSSPNLDIRKKTLDIAMDLTTLRNIDEVVMSLKKEVVKTQNAELEKN 371

Query: 543 GEYRQMLVQAIHSCAL 590
GEYRQMLVQAIHSCAL
Sbjct: 372 GEYRQMLVQAIHSCAL 387


>tr|A9TST3|A9TST3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_225075 PE=4 SV=1
Length = 956

Score = 295 bits (756), Expect = 1e-78
Identities = 151/196 (77%), Positives = 166/196 (84%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLMLF CAQERAV +LL HLD V +WGD QMVVL+LIRKVCRT P KG+Y
Sbjct: 195 FLMLFNCAQERAVAYLLGHLDKVSSWGDTFQMVVLELIRKVCRTNPEVKGRYIKIIVSLL 254

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
AVMYE A TLVSLSSAPTA+RAAAN YCQLL +QSDNNVKLI+LDRLQELK SHR
Sbjct: 255 SSQYAAVMYESAGTLVSLSSAPTAVRAAANAYCQLLQTQSDNNVKLIVLDRLQELKTSHR 314

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
EVM+E+IMDVLRALSSPNLDI++KTLDIA++L+T RNIDEVVMTLKKEVVKTQN +LEKN
Sbjct: 315 EVMMEVIMDVLRALSSPNLDIRKKTLDIAMDLVTLRNIDEVVMTLKKEVVKTQNGDLEKN 374

Query: 543 GEYRQMLVQAIHSCAL 590
GEYRQMLVQAIHSCAL
Sbjct: 375 GEYRQMLVQAIHSCAL 390


>tr|A7PVN7|A7PVN7_VITVI Chromosome chr9 scaffold_33, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025293001
PE=4 SV=1
Length = 949

Score = 283 bits (724), Expect = 5e-75
Identities = 141/196 (71%), Positives = 168/196 (85%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLMLF CAQ +AV+++ +++D VP+W + +QMVVL+LI+KVCRT EKGKY
Sbjct: 192 FLMLFNCAQFKAVDYVFSNIDRVPDWDEQMQMVVLELIKKVCRTNKDEKGKYIKIIISLL 251

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
TAV+YECA TL+SLSSAPTAIRAAANTYCQLLLSQSDNNVKLI+LDRL ELK+ HR
Sbjct: 252 NSPLTAVIYECANTLMSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVLDRLNELKSLHR 311

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
V+VEMIMDVLRALSSP+LDI+RKT+DIAL+LITP+N+DEVV+ LKKEVVKTQ+ ELEKN
Sbjct: 312 GVVVEMIMDVLRALSSPSLDIRRKTIDIALDLITPKNVDEVVLVLKKEVVKTQSVELEKN 371

Query: 543 GEYRQMLVQAIHSCAL 590
GEYRQML+Q IHSCA+
Sbjct: 372 GEYRQMLIQGIHSCAI 387


>tr|Q53PC6|Q53PC6_ORYSJ Adaptin N terminal region family protein,
expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os11g07280 PE=4 SV=1
Length = 885

Score = 263 bits (671), Expect = 7e-69
Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 1/197 (0%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179
FLML CAQERAV +LL + + V W DLLQM +DLIRKVCR+ A+KG+Y
Sbjct: 193 FLMLCACAQERAVAYLLTNAERVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIISL 252

Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359
+AV+YE A LVSLSSAPTA+RAAANTYCQLL SQSDNNVKLI+LDRL EL+ASH
Sbjct: 253 LSAPNSAVVYESAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLIVLDRLHELRASH 312

Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539
R+VMV+++MDVLRALSSPN+D++RK LD+ L+L+TPRN++EVVM LKKEVVKTQ +LEK
Sbjct: 313 RDVMVDVVMDVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLKKEVVKTQAGDLEK 372

Query: 540 NGEYRQMLVQAIHSCAL 590
GEYRQMLVQAIHSCA+
Sbjct: 373 GGEYRQMLVQAIHSCAV 389


>tr|B8BJD1|B8BJD1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35302 PE=4 SV=1
Length = 950

Score = 263 bits (671), Expect = 7e-69
Identities = 134/197 (68%), Positives = 160/197 (81%), Gaps = 1/197 (0%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179
FLML CAQERAV +LL + + V W DLLQM +DLIRKVCR+ A+KG+Y
Sbjct: 190 FLMLCACAQERAVAYLLTNAERVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIISL 249

Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359
+AV+YE A LVSLSSAPTA+RAAANTYCQLL SQSDNNVKLI+LDRL EL+ASH
Sbjct: 250 LSAPNSAVVYESAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLIVLDRLHELRASH 309

Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539
R+VMV+++MDVLRALSSPN+D++RK LD+ L+L+TPRN++EVVM LKKEVVKTQ +LEK
Sbjct: 310 RDVMVDVVMDVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLKKEVVKTQAGDLEK 369

Query: 540 NGEYRQMLVQAIHSCAL 590
GEYRQMLVQAIHSCA+
Sbjct: 370 GGEYRQMLVQAIHSCAV 386


>tr|A2WNI6|A2WNI6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_01415 PE=4 SV=1
Length = 950

Score = 262 bits (669), Expect = 1e-68
Identities = 133/197 (67%), Positives = 160/197 (81%), Gaps = 1/197 (0%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRT-KPAEKGKYXXXXXXX 179
FLML TCAQERAV +LL++ D V W DLLQM +DLIRKVCR+ A+KG+Y
Sbjct: 192 FLMLCTCAQERAVAYLLSNADRVAEWPDLLQMAAVDLIRKVCRSPNRADKGRYIKIIIAL 251

Query: 180 XXXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASH 359
TAV+YECA L SLSSAPTA+RAAANTYC+LL SQSDNNVKLI+LDRL EL+ SH
Sbjct: 252 LSSPSTAVVYECAGALESLSSAPTAVRAAANTYCELLSSQSDNNVKLIVLDRLNELRTSH 311

Query: 360 REVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEK 539
R+VMV+++MDVLRAL+SPN D+KRK LD+ L+L+T RN++EVV+ LKKEVVKTQ ELEK
Sbjct: 312 RDVMVDVVMDVLRALASPNSDVKRKVLDLVLDLLTARNVEEVVLYLKKEVVKTQAGELEK 371

Query: 540 NGEYRQMLVQAIHSCAL 590
+GEYRQMLVQAIH+CA+
Sbjct: 372 SGEYRQMLVQAIHACAV 388


>tr|A4RW30|A4RW30_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_49385 PE=4 SV=1
Length = 936

Score = 261 bits (668), Expect = 2e-68
Identities = 127/196 (64%), Positives = 161/196 (82%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
FLML+T AQERAVN+L+N+L++V NWGD+LQ VVLDLIRKVCR+ P +KGKY
Sbjct: 198 FLMLYTHAQERAVNYLMNNLESVSNWGDILQTVVLDLIRKVCRSDPTQKGKYIKVILMLL 257

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
+V+YECA TLV+LS+APTAI+AAAN YCQLL++QSDNNVKLI+LDRL +LK ++
Sbjct: 258 GTNNASVVYECANTLVALSNAPTAIKAAANCYCQLLVNQSDNNVKLIVLDRLTDLKKDNK 317

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
E++ MIMD+LRA+SSPN+DIKRKTLD+ L+LITPRNID+V LK EV+K+Q++ +
Sbjct: 318 ELLQAMIMDILRAISSPNIDIKRKTLDLVLDLITPRNIDDVTSMLKTEVIKSQSENTSET 377

Query: 543 GEYRQMLVQAIHSCAL 590
GEYRQ+LVQAIH CAL
Sbjct: 378 GEYRQLLVQAIHKCAL 393


>tr|Q76LD1|Q76LD1_BOTBR Coatomer subunit beta OS=Botryococcus
braunii GN=bCOP PE=2 SV=1
Length = 947

Score = 261 bits (667), Expect = 2e-68
Identities = 135/196 (68%), Positives = 155/196 (79%)
Frame = +3

Query: 3 FLMLFTCAQERAVNFLLNHLDNVPNWGDLLQMVVLDLIRKVCRTKPAEKGKYXXXXXXXX 182
F L AQ+ AVN+LL D+V GDL+Q+ VLDLIRKVCRT P EKGKY
Sbjct: 194 FQFLCNHAQDLAVNWLLGVADSVGQMGDLMQIAVLDLIRKVCRTNPGEKGKYIKIILALL 253

Query: 183 XXXXTAVMYECAATLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIILDRLQELKASHR 362
AVMYECA TLVSLS APTAIRAAAN YCQLL+S SDNNV+LI+LDRLQELK HR
Sbjct: 254 QSTSAAVMYECAVTLVSLSQAPTAIRAAANCYCQLLVSHSDNNVRLIVLDRLQELKDKHR 313

Query: 363 EVMVEMIMDVLRALSSPNLDIKRKTLDIALELITPRNIDEVVMTLKKEVVKTQNKELEKN 542
EVM EM+MDVLRAL++PN+DI++K LDI+L+LIT RNIDEVV LKKEV+KTQ+KELEK
Sbjct: 314 EVMTEMLMDVLRALAAPNMDIRKKALDISLDLITQRNIDEVVQLLKKEVMKTQSKELEKG 373

Query: 543 GEYRQMLVQAIHSCAL 590
EYRQ+LVQAIHSCA+
Sbjct: 374 AEYRQLLVQAIHSCAV 389