NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963091
Clone id TST39A01NGRL0015_J16
Library
Length 627
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_J16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TCGCTTTCTAGCGGAGTTCGTCGTCCTGCGACATGGCTGCCCTCGCTGCCGCGTCCGTCT
CCAACGCTGCTGCTCTGGGCAACAGCCTTGCCACCAAGAATGCTCTTCGCGAGAAGGTCC
CTGTGGTGCAGGCCAGAGTCAGCATGAATTCTGAGTACTGGTATGGGCCCGATCGCCCCA
AATACCTTGGCCCCTTCTCTGCCCAGACCCCTTCCTACCTCAAGGGCGAGTTCCCTGGCG
ATTACGGCTGGGACACCGCTGGCCTATCTGCAGACCCTGAGGCATTTGCTAAGAACAGGG
CCTTGGAGGTTATTCACAGCCGATGGGCCATGCTTGGAGCTTTGGGATGCATCTTCCCAG
AGGTTGCACAGAAGTATCTGAATGTGTCCTTCAAGGAGGCAGTCTGGTTCAAGGCTGGAG
CACAGATTTTCTCAGAGGGTGGGTTGGACTACCTCGGCAACCCCAACCTTGTTCATGCAC
AGAGCATTCTCGCCATTTGGGCATGCCAGGTGGTGTTGATGGGAGCTGCAGAGGGCTACC
GCATCAATGGTTTATCAGGAGTTGGTGAGGGTGGTGACTTGTATCCTGGTGGGCAATACT
TTGACCCCTTGGGCTTGGCTGATGACC
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 180
Score (bit) 303.0
E-value 5.0e-82
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963091|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_J16, 5'
         (627 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...   303   5e-82
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...   299   9e-81
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   263   4e-70
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   260   4e-69
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   260   4e-69
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   260   5e-69
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   260   5e-69
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   258   1e-68
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   258   2e-68
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   256   9e-68
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   255   1e-67
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   255   1e-67
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   254   2e-67
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   254   3e-67
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   254   3e-67
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   254   3e-67
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   253   4e-67
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   253   6e-67
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   253   6e-67
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   253   7e-67
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   252   1e-66
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   252   1e-66
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   252   1e-66
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   251   2e-66
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   251   2e-66
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   251   2e-66
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   251   2e-66
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   251   3e-66
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   251   3e-66
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   250   4e-66

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
           chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
          Length = 265

 Score =  303 bits (776), Expect = 5e-82
 Identities = 145/180 (80%), Positives = 158/180 (87%), Gaps = 2/180 (1%)
 Frame = +3

Query: 93  TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 266
           TKNA  LR+ V +  AR +M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 23  TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 267 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 446
           SADPEAFAKNRALEVIH RWAMLGALGCIFPEV +K++ V FKE VWFKAG+QIFS+GGL
Sbjct: 83  SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 447 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           DYLGNPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 143 DYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADD 202



 Score = 30.8 bits (68), Expect = 5.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 231 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 347
           +PG   +D  GL+ DP  FA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
           III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
          Length = 268

 Score =  299 bits (765), Expect = 9e-81
 Identities = 138/174 (79%), Positives = 151/174 (86%)
 Frame = +3

Query: 105 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 284
           LR+       R++M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEA
Sbjct: 32  LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 285 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 464
           FA+NRALEVIH RWAMLGALGC+FPEV QK++ V FKE VWFKAG+QIFSEGGLDYLGNP
Sbjct: 92  FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151

Query: 465 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NLVHAQSILA+   QV+LMG  EG+RINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 152 NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD 205


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  263 bits (673), Expect = 4e-70
 Identities = 137/185 (74%), Positives = 144/185 (77%), Gaps = 8/185 (4%)
 Frame = +3

Query: 96  KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 254
           +N L  KV     RVSM           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 255 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 434
           TAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIF 
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GVKFGEAVWFKAGSQIFQ 138

Query: 435 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 611
           EGGLDYLGNPNLVHAQSILAIWACQVVLMGA EGYR+ G   +GEG D LYPGG  FDPL
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGG-GPLGEGLDQLYPGGA-FDPL 196

Query: 612 GLADD 626
           GLA+D
Sbjct: 197 GLAED 201


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  260 bits (665), Expect = 4e-69
 Identities = 129/157 (82%), Positives = 135/157 (85%), Gaps = 1/157 (0%)
 Frame = +3

Query: 159 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 338
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 339 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 518
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 519 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADD 626
           MG  EGYR+ G   +GEG D +YPGG  FDPLGLADD
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADD 200


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  260 bits (665), Expect = 4e-69
 Identities = 129/157 (82%), Positives = 135/157 (85%), Gaps = 1/157 (0%)
 Frame = +3

Query: 159 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 338
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 339 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 518
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 519 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADD 626
           MG  EGYR+ G   +GEG D +YPGG  FDPLGLADD
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADD 200


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  260 bits (664), Expect = 5e-69
 Identities = 137/185 (74%), Positives = 143/185 (77%), Gaps = 8/185 (4%)
 Frame = +3

Query: 96  KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 254
           ++ L  KV V   R SM           WYG DRPK+LGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 255 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 434
           TAGLSADPE FAKNR LEVIHSRWAMLGALGCIFPE+  K   V F EAVWFKAGAQIFS
Sbjct: 80  TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 435 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 611
           EGGLDYLGNPNLVHAQSILAIWA QVVLMG  EGYR+ G   +GEG D LYPGG  FDPL
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GPLGEGLDPLYPGGA-FDPL 196

Query: 612 GLADD 626
           GLADD
Sbjct: 197 GLADD 201



 Score = 31.6 bits (70), Expect = 3.5
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 231 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 347
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 188 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  260 bits (664), Expect = 5e-69
 Identities = 128/163 (78%), Positives = 136/163 (83%), Gaps = 1/163 (0%)
 Frame = +3

Query: 141 SMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHS 320
           S  +  WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH 
Sbjct: 43  SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 321 RWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIW 500
           RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIW
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161

Query: 501 ACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADD 626
           ACQVVLMG  EGYR+ G   +GEG D +YPGG  FDPLGLADD
Sbjct: 162 ACQVVLMGFVEGYRVGG-GPLGEGLDPIYPGGA-FDPLGLADD 202



 Score = 30.4 bits (67), Expect = 7.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 231 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 347
           +PG   +D  GL+ DP+AFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  258 bits (660), Expect = 1e-68
 Identities = 127/157 (80%), Positives = 134/157 (85%), Gaps = 1/157 (0%)
 Frame = +3

Query: 159 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 338
           WYG DRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49  WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 339 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 518
           ALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAIWACQVVL
Sbjct: 109 ALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 167

Query: 519 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADD 626
           MG  EGYR+ G   +GEG D +YPGG  FDPLGLADD
Sbjct: 168 MGFVEGYRVGG-GPLGEGLDKIYPGGA-FDPLGLADD 202



 Score = 31.6 bits (70), Expect = 3.5
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 231 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 347
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  258 bits (659), Expect = 2e-68
 Identities = 132/185 (71%), Positives = 143/185 (77%), Gaps = 8/185 (4%)
 Frame = +3

Query: 96  KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 254
           +N L +KV   QAR++M           WYGPDRPKYLGPFS  TPSYL GEFPGDYGWD
Sbjct: 22  QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 255 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 434
           TA +SADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   + F EAVWFKAGAQIFS
Sbjct: 82  TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 435 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 611
           EGGLDY GNPNL+HAQSILAIWACQVVLMG  EGYR+ G   +GEG D L PGG  FDPL
Sbjct: 141 EGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG-GTLGEGLDPLLPGGA-FDPL 198

Query: 612 GLADD 626
           GLADD
Sbjct: 199 GLADD 203


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  256 bits (653), Expect = 9e-68
 Identities = 128/169 (75%), Positives = 140/169 (82%), Gaps = 1/169 (0%)
 Frame = +3

Query: 123 VVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRA 302
           V + +V+ +   WYGPDR KYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR 
Sbjct: 34  VGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 93

Query: 303 LEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQ 482
           LEVIHSRWAMLGALGC+FPE+  +   V F EAVWFKAG+QIFSEGGLDYLGNP+L+HAQ
Sbjct: 94  LEVIHSRWAMLGALGCVFPELLSRN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 152

Query: 483 SILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADD 626
           SILAIWACQVVLMGA EGYRI G   +GE  D LYPGG  FDPLGLADD
Sbjct: 153 SILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLADD 199



 Score = 30.8 bits (68), Expect = 5.9
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 231 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 347
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 186 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223
tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 176
Score (bit) 303.0
E-value 7.0e-81
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963091|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_J16, 5'
         (627 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr...   303   7e-81
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote...   301   2e-80
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who...   300   6e-80
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis...   300   6e-80
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome...   298   1e-79
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza...   298   2e-79
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ...   297   3e-79
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote...   297   3e-79
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs...   296   5e-79
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b...   296   5e-79
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote...   296   9e-79
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas...   295   2e-78
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ...   295   2e-78
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr...   294   3e-78
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten...   294   3e-78
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus...   293   7e-78
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul...   293   7e-78
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ...   292   1e-77
tr|Q39341|Q39341_BRANA LHCII Type III chlorophyll a/b binding pr...   283   6e-75
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   271   2e-71
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   269   1e-70
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   268   2e-70
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   268   2e-70
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   267   3e-70
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   267   3e-70
tr|Q39340|Q39340_BRANA LHC II Type III chlorophyll a/b binding p...   266   7e-70
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   266   7e-70
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   266   1e-69
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   265   1e-69
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   265   2e-69

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
           protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
          Length = 269

 Score =  303 bits (775), Expect = 7e-81
 Identities = 144/176 (81%), Positives = 154/176 (87%)
 Frame = +3

Query: 99  NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 278
           N LR+ V +   + SM++E WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 279 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 458
           EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 459 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG +LYPGGQYFDPLGLADD
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADD 206


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
           cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
          Length = 267

 Score =  301 bits (771), Expect = 2e-80
 Identities = 144/180 (80%), Positives = 154/180 (85%), Gaps = 2/180 (1%)
 Frame = +3

Query: 93  TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 266
           T NA  LR+       R++M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 25  TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 267 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 446
           SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V FKE VWFKAGAQIFSEGGL
Sbjct: 85  SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 447 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           DYLGNPNLVHAQSILA+   QV+LMG  EGYRINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 145 DYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADD 204


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009737001 PE=4 SV=1
          Length = 264

 Score =  300 bits (767), Expect = 6e-80
 Identities = 142/176 (80%), Positives = 151/176 (85%)
 Frame = +3

Query: 99  NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 278
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 279 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 458
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 459 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NPNLVHAQSILA+   QVVLMG  EGYRINGL GVGEG DLYPGG YFDPLGLADD
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADD 201


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001096 PE=4 SV=1
          Length = 269

 Score =  300 bits (767), Expect = 6e-80
 Identities = 142/176 (80%), Positives = 151/176 (85%)
 Frame = +3

Query: 99  NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 278
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 31  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 279 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 458
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 459 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NPNLVHAQSILA+   QVVLMG  EGYRINGL GVGEG DLYPGG YFDPLGLADD
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADD 206


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
           PE=4 SV=1
          Length = 264

 Score =  298 bits (764), Expect = 1e-79
 Identities = 140/176 (79%), Positives = 153/176 (86%)
 Frame = +3

Query: 99  NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 278
           N LR+ VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 279 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 458
           EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V FKE +WFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 459 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVG+G +LYPGGQYFDPLGLADD
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADD 201


>tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26482 PE=4 SV=1
          Length = 266

 Score =  298 bits (762), Expect = 2e-79
 Identities = 139/174 (79%), Positives = 151/174 (86%)
 Frame = +3

Query: 105 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 284
           LR+       R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30  LRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 285 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 464
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 465 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NLVHAQSILA+   QVVLMG  EGYRINGL GVG+G DLYPGGQYFDPLGLADD
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADD 203


>tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding
           protein (Fragment) OS=Brassica napus GN=Lhcb3*1 PE=4
           SV=1
          Length = 202

 Score =  297 bits (761), Expect = 3e-79
 Identities = 140/178 (78%), Positives = 152/178 (85%)
 Frame = +3

Query: 93  TKNALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSA 272
           T N LR+ V +   + +M ++ WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSA
Sbjct: 25  TFNPLRDAVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSA 84

Query: 273 DPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDY 452
           DPEAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDY
Sbjct: 85  DPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDY 144

Query: 453 LGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           LGNPNLVHAQSILA+   QV+LMG  EG+RINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 145 LGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD 202


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
           OS=Medicago falcata GN=CAB PE=2 SV=1
          Length = 266

 Score =  297 bits (761), Expect = 3e-79
 Identities = 141/176 (80%), Positives = 153/176 (86%)
 Frame = +3

Query: 99  NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 278
           N LR+ V +  +R +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 28  NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 279 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 458
           EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 88  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 459 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG +LYPGGQYFDPLGLADD
Sbjct: 148 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADD 203


>tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subsp.
           japonica GN=P0406F06.32 PE=2 SV=1
          Length = 266

 Score =  296 bits (759), Expect = 5e-79
 Identities = 138/174 (79%), Positives = 151/174 (86%)
 Frame = +3

Query: 105 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 284
           +R+       R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30  VRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 285 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 464
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 465 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NLVHAQSILA+   QVVLMG  EGYRINGL GVG+G DLYPGGQYFDPLGLADD
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADD 203


>tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b
           binding protein (Fragment) OS=Vigna unguiculata
           GN=CipLhcb3 PE=2 SV=1
          Length = 211

 Score =  296 bits (759), Expect = 5e-79
 Identities = 141/176 (80%), Positives = 153/176 (86%)
 Frame = +3

Query: 99  NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 278
           N LR+ V +   + +M+++ WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDAVSMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 279 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 458
           EAFAKNRALEVIH RWA+LGALGCI PEV  K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWALLGALGCITPEVLGKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 459 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 626
           NPNLVHAQSILA+   QVVLMG AEG+RINGL GVGEG +LYP GQYFDPLGLADD
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLAEGFRINGLDGVGEGNNLYPXGQYFDPLGLADD 206