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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963112
Clone id TST39A01NGRL0015_K13
Library
Length 624
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_K13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CCAAGACAGTCCTTCGGGAGGCCATACGGTTGCTAAAGCCTGGCAAGCCATTCATTTTTG
TGGAGAATGTTCAAGCGGAAGGAGAGTTTCTACGCTCATGTCAATTACTGTTTCACAGAG
TGCTTCAGTTATTTGGTGTCCAGAGTGCACCTCCAAAAGAATTGTCTAAGGTGTTGGAGG
AGGCGCAAGGAATTGAGAAGCTTAGTTACGAAACCGTGTTCGGCTATCAAGATCCCCATA
TTGTTGGGTTGGCAGTGAAGCAAATGGAAGCCATGGAAGGCCGAAGCAAGAAAAGGGCAA
ACAAGAAAGCAGTTTCCAGTTGATGTATGCAGAAGCTTTGTTCTAAAGTTGTAGTAAACA
GAAACTTTCCTTGAAATTATCAGCATTTTATGCAGTCTGATGGTTGAAATGGCCTATATC
ATTGTGGATTGTTAATAAGTGAGTATTGCCACAATGTTAGTGATTTCCAACTCTTAGGGC
CCTGTCACACGTGGGCGCCCAGACATGCCTGAACAAGCAAATTTGGGTGCCTTTGTTTCA
CACGCAGGAGGTGGACTGGAGAAATTTAAGTTATCTCACATCTATAGCAATGAATGAGTC
TAGCACAGCTGTAAAATGATCTCG
■■Homology search results ■■ -
sp_hit_id Q8BZ05
Definition sp|Q8BZ05|ARAP2_MOUSE Arf-GAP, Rho-GAP domain, ANK repeat and PH domain-containing protein 2 OS=Mus musculus
Align length 31
Score (bit) 33.9
E-value 0.69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963112|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_K13, 5'
         (624 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8BZ05|ARAP2_MOUSE Arf-GAP, Rho-GAP domain, ANK repeat and PH...    34   0.69 
sp|Q9H8H3|MET7A_HUMAN Methyltransferase-like protein 7A OS=Homo ...    32   3.4  
sp|A7Z627|UBIE_BACA2 Menaquinone biosynthesis methyltransferase ...    30   7.7  
sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54...    30   7.7  

>sp|Q8BZ05|ARAP2_MOUSE Arf-GAP, Rho-GAP domain, ANK repeat and PH
            domain-containing protein 2 OS=Mus musculus GN=Arap2 PE=1
            SV=2
          Length = 1703

 Score = 33.9 bits (76), Expect = 0.69
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = +2

Query: 206  LRNRVRLSRSPYCWVGSEANGSHGRPKQEKG 298
            LRNR R  RS  C   +EA G HG PK  KG
Sbjct: 1618 LRNRARKHRSFNCLEDTEAEGPHGLPKAYKG 1648


>sp|Q9H8H3|MET7A_HUMAN Methyltransferase-like protein 7A OS=Homo
           sapiens GN=METTL7A PE=1 SV=1
          Length = 244

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
 Frame = +3

Query: 9   VLREAIRLLKPGKPFIFVENVQAE-GEFLRSCQLLFHRVLQLFGVQSAPPKELSKVLEEA 185
           +LRE  R+L+PG  F F+E+V AE   +    Q +      L        +E  K LE A
Sbjct: 156 ILREVCRVLRPGGAFYFMEHVAAECSTWNYFWQQVLDPAWHLLFDGCNLTRESWKALERA 215

Query: 186 -------QGIE-KLSYETVFGYQDPHIVGLAVK 260
                  Q I+  LS+E V     PHI G AVK
Sbjct: 216 SFSKLKLQHIQAPLSWELV----RPHIYGYAVK 244


>sp|A7Z627|UBIE_BACA2 Menaquinone biosynthesis methyltransferase
           ubiE OS=Bacillus amyloliquefaciens (strain FZB42)
           GN=ubiE PE=3 SV=1
          Length = 233

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 18/91 (19%)
 Frame = +3

Query: 6   TVLREAIRLLKPGKPFIFVENVQAEGEFLRSCQLLFHR-VLQLFGVQSAPP--------- 155
           TVL+E  R++KPG   + +E  Q E    R    L+ + ++  FG   A           
Sbjct: 134 TVLKEMRRVVKPGGQVVCLETSQPEMFGFRQAYFLYFKYIMPFFGKMFAKSYKEYSWLQE 193

Query: 156 --------KELSKVLEEAQGIEKLSYETVFG 224
                   KEL+++ EEA G+  + Y +  G
Sbjct: 194 SAREFPGMKELARLFEEA-GLTNVKYHSFTG 223


>sp|Q92698|RAD54_HUMAN DNA repair and recombination protein
           RAD54-like OS=Homo sapiens GN=RAD54L PE=1 SV=2
          Length = 747

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +1

Query: 73  KRKESFYAHVNYCFTECFSYLVSRVHLQKNCLRCWRRRKELRSLVTKPCSAIKIPI 240
           KRK S    +  CF   F   +S++  Q  CL   +    +RS+++KP    K+PI
Sbjct: 34  KRKSSSETQIQECFLSPFRKPLSQLTNQPPCLDSSQHEAFIRSILSKP---FKVPI 86
tr_hit_id A9TN04
Definition tr|A9TN04|A9TN04_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 93
Score (bit) 82.0
E-value 3.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963112|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_K13, 5'
         (624 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TN04|A9TN04_PHYPA Predicted protein OS=Physcomitrella paten...    82   3e-14
tr|B8HPE8|B8HPE8_9CHRO Methyltransferase type 11 OS=Cyanothece s...    50   8e-05
tr|B0BYP1|B0BYP1_ACAM1 Putative uncharacterized protein OS=Acary...    50   1e-04
tr|B6PAU2|B6PAU2_BRAFL Putative uncharacterized protein OS=Branc...    49   3e-04
tr|B6KY14|B6KY14_BRAFL Putative uncharacterized protein OS=Branc...    47   7e-04
tr|B2J8A7|B2J8A7_NOSP7 Methyltransferase type 11 OS=Nostoc punct...    45   0.005
tr|B4WUN7|B4WUN7_9SYNE Methyltransferase, UbiE/COQ5 family OS=Sy...    45   0.005
tr|B4W3I3|B4W3I3_9CYAN Methyltransferase domain family OS=Microc...    44   0.008
tr|Q54MJ4|Q54MJ4_DICDI Putative uncharacterized protein OS=Dicty...    43   0.017
tr|B8BSM6|B8BSM6_THAPS Predicted protein OS=Thalassiosira pseudo...    40   0.086
tr|B5Y4T3|B5Y4T3_PHATR Predicted protein OS=Phaeodactylum tricor...    40   0.086
tr|Q7NH66|Q7NH66_GLOVI Gll2671 protein OS=Gloeobacter violaceus ...    40   0.15 
tr|Q6Z2U2|Q6Z2U2_ORYSJ Os02g0744100 protein OS=Oryza sativa subs...    39   0.25 
tr|B8AIF8|B8AIF8_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.25 
tr|Q0VFC5|Q0VFC5_XENTR Mettl7a protein (Fragment) OS=Xenopus tro...    39   0.33 
tr|Q5PQ19|Q5PQ19_XENLA LOC496010 protein OS=Xenopus laevis GN=LO...    38   0.43 
tr|A9SFI0|A9SFI0_PHYPA Predicted protein (Fragment) OS=Physcomit...    38   0.56 
tr|Q5I052|Q5I052_XENLA LOC496284 protein OS=Xenopus laevis GN=LO...    37   0.95 
tr|A7QEB3|A7QEB3_VITVI Chromosome chr1 scaffold_84, whole genome...    37   0.95 
tr|Q6GNK2|Q6GNK2_XENLA MGC82719 protein OS=Xenopus laevis GN=met...    36   2.1  
tr|Q0VFQ8|Q0VFQ8_XENTR Putative uncharacterized protein MGC14531...    36   2.1  
tr|A9ULD3|A9ULD3_XENTR Putative uncharacterized protein MGC14531...    36   2.1  
tr|B8HJN1|B8HJN1_9CHRO RNA methyltransferase, TrmH family, group...    35   3.6  
tr|Q54MJ5|Q54MJ5_DICDI Putative uncharacterized protein OS=Dicty...    35   3.6  
tr|Q4Y208|Q4Y208_PLACH DNA repair endonuclease, putative OS=Plas...    35   4.7  
tr|Q72HW6|Q72HW6_THET2 Phosphatidylethanolamine N-methyltransfer...    34   6.2  
tr|Q3UW93|Q3UW93_MOUSE Putative uncharacterized protein (Fragmen...    34   8.0  
tr|A4SC64|A4SC64_PROVI DsrH family protein OS=Prosthecochloris v...    34   8.0  
tr|Q941B1|Q941B1_ARATH At1g69520/F10D13_17 OS=Arabidopsis thalia...    34   8.0  

>tr|A9TN04|A9TN04_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_170947 PE=4 SV=1
          Length = 303

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 38/93 (40%), Positives = 60/93 (64%)
 Frame = +3

Query: 3   KTVLREAIRLLKPGKPFIFVENVQAEGEFLRSCQLLFHRVLQLFGVQSAPPKELSKVLEE 182
           +TVLR+A+R+LKPGK FI++ENV AE   + + Q     + +LFG +    ++L   + +
Sbjct: 177 ETVLRDAVRVLKPGKKFIYIENVGAENPLVLAAQQSIEGLGKLFGKKYTVTRDLLSFILK 236

Query: 183 AQGIEKLSYETVFGYQDPHIVGLAVKQMEAMEG 281
            +G E + Y+ V G+QDPHIVG+A K+ +   G
Sbjct: 237 TKGFEVIKYQVVLGFQDPHIVGIATKKQQTTTG 269


>tr|B8HPE8|B8HPE8_9CHRO Methyltransferase type 11 OS=Cyanothece sp.
           PCC 7425 GN=Cyan7425_5114 PE=4 SV=1
          Length = 221

 Score = 50.4 bits (119), Expect = 8e-05
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
 Frame = +3

Query: 12  LREAIRLLKPGKPFIFVENVQA-EGEFLRSCQLLFHRVLQLFGVQSAPPKELSKVLEEAQ 188
           L E  R+LKPG  F+F+E+V A EG  LR  Q     V Q+ G    P ++    + +A 
Sbjct: 134 LAEIYRVLKPGGKFLFIEHVAAPEGTRLRRLQQFVRPVWQMIGDGCCPDRDTGLTIRQA- 192

Query: 189 GIEKLSYETVFG-----YQDPHIVGLAVK 260
           G  +++YE+  G        PHI G+A+K
Sbjct: 193 GFSQVNYESFTGPVPIAIVQPHIAGVAIK 221


>tr|B0BYP1|B0BYP1_ACAM1 Putative uncharacterized protein
           OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_0884
           PE=4 SV=1
          Length = 221

 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
 Frame = +3

Query: 3   KTVLREAIRLLKPGKPFIFVENVQA-EGEFLRSCQLLFHRVLQLFGVQSAPPKELSKVLE 179
           ++ +++ +R+LKPG  F+F+E+V A  G FLR  Q     + Q+ G      +E  KV+E
Sbjct: 129 ESTVQDILRVLKPGGQFLFIEHVMAPAGSFLRRVQTGLCPLWQVIGDGCRLDRETGKVIE 188

Query: 180 EAQGIEKLSYETV-----FGYQDPHIVGLAVK 260
            A G  K+ Y+T           PHI+G A K
Sbjct: 189 SA-GFAKVDYQTFEAPVPIAVVKPHIIGAATK 219


>tr|B6PAU2|B6PAU2_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_287012 PE=4 SV=1
          Length = 243

 Score = 48.5 bits (114), Expect = 3e-04
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
 Frame = +3

Query: 9   VLREAIRLLKPGKPFIFVENVQAE-GEFLRSCQLLFHRVLQLF----GVQSAPPKELSKV 173
           V RE  R+LKPG  F F+E V+ E G +  S Q +F  +LQLF     VQ +  ++L K 
Sbjct: 155 VFREVRRVLKPGGTFYFLEQVRGEAGSWTNSFQAVFDPLLQLFYGGCSVQDSTWEDLRKA 214

Query: 174 LEEAQGIEKLSYETVFGYQDPHIVGLAVK 260
                  E++S    +    PH++G AVK
Sbjct: 215 RFSTVNWERISGPKSWWIFAPHVMGTAVK 243


>tr|B6KY14|B6KY14_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_63793 PE=4 SV=1
          Length = 195

 Score = 47.4 bits (111), Expect = 7e-04
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
 Frame = +3

Query: 9   VLREAIRLLKPGKPFIFVENVQAE-GEFLRSCQLLFHRVLQLF----GVQSAPPKELSKV 173
           V RE  R+LKPG  F F+E V+ E G +  S Q +F  +LQLF     VQ +  ++L K 
Sbjct: 107 VFREIRRVLKPGGTFYFLEQVRGEAGSWTNSFQTVFDPLLQLFYGGCSVQESTWEDLRKA 166

Query: 174 LEEAQGIEKLSYETVFGYQDPHIVGLAVK 260
                  E++S    +    PH++G AVK
Sbjct: 167 RFSRVDWERISGPKSWWIFAPHVMGTAVK 195


>tr|B2J8A7|B2J8A7_NOSP7 Methyltransferase type 11 OS=Nostoc
           punctiforme (strain ATCC 29133 / PCC 73102)
           GN=Npun_R0602 PE=4 SV=1
          Length = 219

 Score = 44.7 bits (104), Expect = 0.005
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
 Frame = +3

Query: 12  LREAIRLLKPGKPFIFVENVQA-EGEFLRSCQLLFHRVLQLFGVQSAPPKELSKVLEEAQ 188
           L+  +R+LKPG  F+F+E+V A +G  LR  Q       Q+ G    P +E    LE A 
Sbjct: 134 LQAILRVLKPGGRFLFIEHVAAPQGTVLRQVQSAIRPTWQVIGDGCHPDRETLIALENA- 192

Query: 189 GIEKLSYETVFGYQ----DPHIVGLA 254
           G   ++YE  F  Q     PHI+G+A
Sbjct: 193 GFASINYER-FDAQLPIVSPHIIGVA 217


>tr|B4WUN7|B4WUN7_9SYNE Methyltransferase, UbiE/COQ5 family
           OS=Synechococcus sp. PCC 7335 GN=S7335_791 PE=4 SV=1
          Length = 240

 Score = 44.7 bits (104), Expect = 0.005
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
 Frame = +3

Query: 6   TVLREAIRLLKPGKPFIFVENVQAE-GEFLRSCQLLFHRVLQLFGVQSAPPKELSKVLEE 182
           TVL+E  R+LKPG  FIF+E+V AE G + R  Q       +       P +E  K+L +
Sbjct: 134 TVLQEIQRILKPGGHFIFLEHVAAENGSWTRRIQDKITPFWKTLFDNCHPNRETQKMLVK 193

Query: 183 AQGIEKLSYETV---FGYQDPHIVGLAVK 260
           A G   + YE          PHIVG+A K
Sbjct: 194 A-GFSSVDYEHFQLNLPVVSPHIVGIATK 221


>tr|B4W3I3|B4W3I3_9CYAN Methyltransferase domain family
           OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_3394
           PE=4 SV=1
          Length = 228

 Score = 43.9 bits (102), Expect = 0.008
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
 Frame = +3

Query: 12  LREAIRLLKPGKPFIFVENVQAE-GEFLRSCQLLFHRVLQLFGVQSAPPKELSKVLEEAQ 188
           ++E  R+LKPG  F+FVE+V AE G + R  Q     V +       P +E    LE+A 
Sbjct: 138 VQEIRRILKPGGRFLFVEHVAAECGSWQRRIQGSIEPVWKTLFDGCRPNRETGLALEKA- 196

Query: 189 GIEKLSY---ETVFGYQDPHIVGLAVKQME 269
           G E ++Y   +  F    PHI G+A K  +
Sbjct: 197 GFENINYQQFQVPFPIVSPHISGVATKSRD 226


>tr|Q54MJ4|Q54MJ4_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0186741 PE=4 SV=1
          Length = 280

 Score = 42.7 bits (99), Expect = 0.017
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   KTVLREAIRLLKPGKPFIFVENVQAEGEFLRSCQLLFHRVLQLFGVQSAPPKELSKVLEE 182
           K ++   IRLLKPG   +F+E++ +E    R  Q + +    L G      K+  K+++ 
Sbjct: 192 KEIIDNLIRLLKPGGKLLFIEHIASEKYHWRIFQNIINPFWSLIGDNCKLTKKTDKLIKS 251

Query: 183 AQGIEKLSYETVF-GYQDPHIVGLAVKQM 266
            +G EK++   +F       I G+A+K++
Sbjct: 252 IKGWEKVTISNIFTPLPFNFIQGIAIKEL 280


>tr|B8BSM6|B8BSM6_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_2036 PE=4 SV=1
          Length = 339

 Score = 40.4 bits (93), Expect = 0.086
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
 Frame = +3

Query: 3   KTVLREAIRLLKPGKPFIFVENVQAEGEFLRSCQLLFHRVLQLFGVQSAPPKE------- 161
           K  +REA R+LKPG  F+FVE+V   GE           V++L G+     +E       
Sbjct: 184 KKSIREAGRVLKPGGRFLFVESVDVGGE------SYLEEVMKLSGMMDYDEEENLEGEDS 237

Query: 162 ---LSKVLEEAQG------------IEKLSYETVFGYQDPHIVGLAVKQMEAMEGRSKKR 296
               S++ +++               E++ Y+ V     PHI G+A+K M+A    ++K+
Sbjct: 238 DEDASEMRDDSSFDEDDDIEVTSPIFEEVGYDNVDMVLQPHIAGVALKAMDADLTSTQKK 297

Query: 297 ANK 305
             K
Sbjct: 298 QMK 300