DK963127
Clone id TST39A01NGRL0015_L05
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_L05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTTGGGTCCTTTTTGCTCTCCTCCTGCCAGAGGATGAGGCGCGCGCCAGCAGGTGCTGTC
CTTGCGAGAAGACGGCTGCACAACAGGTTATGGAAGGTGATTGCATTCAAGGGGGTTGCT
CTACAGGCTCAGGTGGCGAGGACGTGGCAGCAAGAGCTTTTTCATGCGTTGTTCTGCTCG
TTTAATGCCGCAGGCGGGCTTCTCAAGGTCGTTGAAGGCGATCGTGCAGGCTGAGGTTAT
GAGCACTGATTGTGTTGCTCTTCGTGGTTCAGTACACGTGCTGAATGGAGCACGAGACAT
GTAATTTCCATGTACTTATTGTAGCCTATATGACAGGCCAGAAAGGGCAGAAAAATGCTT
TGTAATAGGTTCTTGTTTCGGGTGGTTATCATTATATTGTGTCATGGCAGCAAGTATGAG
GATTTGTTTTGATGTATGAGCTTTTGAGCTACATTATCTAGTGGAAGATTCTTTGTCAAA
AAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6IR37
Definition sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=Mus musculus
Align length 26
Score (bit) 32.3
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963127|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_L05, 5'
(477 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=M... 32 1.1
sp|A4VGD9|TATB_PSEU5 Sec-independent protein translocase protein... 31 2.5

>sp|Q6IR37|ZDH24_MOUSE Probable palmitoyltransferase ZDHHC24 OS=Mus
musculus GN=Zdhhc24 PE=2 SV=2
Length = 284

Score = 32.3 bits (72), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2

Query: 341 LACHIGYNKYMEITCLVLHSARVLNH 264
L C +G++ Y CL+LHSA VL H
Sbjct: 127 LGCCVGFHNYRPFLCLLLHSAGVLLH 152


>sp|A4VGD9|TATB_PSEU5 Sec-independent protein translocase protein
tatB homolog OS=Pseudomonas stutzeri (strain A1501)
GN=tatB PE=3 SV=1
Length = 139

Score = 31.2 bits (69), Expect = 2.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2

Query: 290 LHSARVLNHEEQHNQCS*PQPARSPSTTLRSPPA 189
LH+ R+L+ E + Q P PA +P+ T SPP+
Sbjct: 63 LHNERILDLEREMKQSIMPPPASNPAATPPSPPS 96


tr_hit_id B6PLH6
Definition tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 60
Score (bit) 36.2
E-value 0.83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963127|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_L05, 5'
(477 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein OS=Branc... 36 0.83
tr|B6PLA8|B6PLA8_BRAFL Putative uncharacterized protein OS=Branc... 35 1.4
tr|B8P5Z3|B8P5Z3_9APHY Predicted protein OS=Postia placenta Mad-... 33 5.4
tr|A2BEM9|A2BEM9_DANRE Novel protein containing a DHHC zinc fing... 33 9.2

>tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_108391 PE=4 SV=1
Length = 1131

Score = 36.2 bits (82), Expect = 0.83
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1

Query: 450 SSKAHTSKQILILAAMTQYNDNHPKQEPITKHFSALSGLSYRLQ*VHGNYMSRAPFSTCT 271
S ++ +Q+ ++A + QY+ HP+ P+ + F LS L NY SRAP T T
Sbjct: 91 SFRSFRLEQVRLVACVCQYSSEHPQALPMDQLFQGLSQLPKTETTDISNYFSRAPEETTT 150


>tr|B6PLA8|B6PLA8_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_116539 PE=4 SV=1
Length = 370

Score = 35.4 bits (80), Expect = 1.4
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = -2

Query: 335 CHIGYNKYMEITCLVLHSARVLNHEEQHNQ------CS*PQPARSPSTTLRSPPAALNEQ 174
C G +K+ E C + S +N + ++N C +P P L SPPA N Q
Sbjct: 106 CDCGNSKFPENKCKLDPSKAPVNTDNKYNHNFHGLYCICDRPYPDPDDEL-SPPAFFNPQ 164

Query: 173 NNA*KSSCCHV 141
NN +CC++
Sbjct: 165 NNTKSYTCCNL 175


>tr|B8P5Z3|B8P5Z3_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_95687 PE=4 SV=1
Length = 785

Score = 33.5 bits (75), Expect = 5.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = -1

Query: 366 ITKHFSALSGLSYRLQ*VHGNYMSRAPFSTCTEPRRATQSVLITSACTIAFNDLEKPACG 187
I++H S L + Q ++ Y++R+P ST EP TQSV +++FN A G
Sbjct: 383 ISQHVSTLRQRDQQQQALYQQYLNRSP-STPPEPSYGTQSVAAVLGGSMSFNSSMNSASG 441

Query: 186 IKRAEQR 166
+ R
Sbjct: 442 LNVGSSR 448


>tr|A2BEM9|A2BEM9_DANRE Novel protein containing a DHHC zinc finger
domain (Fragment) OS=Danio rerio GN=CH211-137I24.2-001
PE=4 SV=1
Length = 362

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2

Query: 260 LRGSVHVLNGARDM*FPCTYCSLYDRPERAEKCFVIGSCFGWLSLYCV 403
LR V L G +D+ C C L RP RA C + G+C + +CV
Sbjct: 169 LRNGVSHLKGEKDVKKKCPVCQLV-RPPRAGHCRICGACVLRMDHHCV 215