DK963168
Clone id TST39A01NGRL0015_M23
Library
Length 588
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_M23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTCACAGATACGCAGCTCTTCGCCTCTTCATATTCTGCTCCCGTCTCTCATACACAGACA
CGAACCTACAGGATTCGGAATCCTTGCTCTCATCGCCGACGATGGCTCTCGTTTTCAAGG
TCAAGCATGGAGACACCCTCCGCAGATGGGTGGTTTCTGACTCAATCAGTGCAGAGATGT
TCCCAGTTACATTGGAGCAATTGCAGGCCAAAGTCAGGGAGCTCTTCCAGTTCCCTCCTT
CTGCTGTGCTCGCTTTTACCTACTTAGATAAAGATAATGATGTGGTTACGCTGGGGGATG
ATCGTGATCTTGTGGACGCATGTCTTGTTCAATGCTTGAACCCACTTCGCCTTGAGGTTC
AGGTCTTGGAATCAAAGTCAAATGGAAGTGATCGCGCACACCAGCCAGCAGACAATTACA
ACATGGAAGTCTTTCTAAAGCTTTTGTTTCCTCATGCAACAGCTGAGGCTTTGCAAGGTT
TTCTACAGTCGCTTGACCCTTCGCTATCTATTGCAACTCTTATTTTAAAGGCTCAGGATG
CTTTCAAGGACTTCTTAGCTCATGCAGCAAGGCCAGAGTTTCCCAAAC
■■Homology search results ■■ -
sp_hit_id O13965
Definition sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces pombe
Align length 63
Score (bit) 34.3
E-value 0.47
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963168|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_M23, 5'
(588 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein O... 34 0.47
sp|Q03396|L_SV5WR Large structural protein OS=Simian virus 5 (st... 31 4.0
sp|Q88434|L_SV5 Large structural protein OS=Simian virus 5 (stra... 31 4.0
sp|P75444|Y334_MYCPN Putative ABC transporter ATP-binding protei... 30 6.8
sp|Q9XW10|PAD1_CAEEL Protein pad-1 OS=Caenorhabditis elegans GN=... 30 8.9
sp|Q47WG1|LEUD_COLP3 3-isopropylmalate dehydratase small subunit... 30 8.9
sp|Q54N87|Y6496_DICDI Putative uncharacterized protein DDB_G0285... 30 9.0

>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein
OS=Schizosaccharomyces pombe GN=mug70 PE=1 SV=1
Length = 730

Score = 34.3 bits (77), Expect = 0.47
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3

Query: 246 VLAFTYLDKDNDVVTLGDDRDLVDACLVQCLNPL-RLEVQVLESKSNGSDRAHQPADNYN 422
++ TY+D + DVV L D DL +A L+ L RLEV+ + + +N + +H P +
Sbjct: 612 LVTLTYIDDEGDVVELVSDSDLREAILLARRRGLPRLEVRGVAAFTNHLESSHPPISTVD 671

Query: 423 MEV 431
+
Sbjct: 672 SSI 674


>sp|Q03396|L_SV5WR Large structural protein OS=Simian virus 5 (strain
21004-WR) GN=L PE=3 SV=1
Length = 2255

Score = 31.2 bits (69), Expect = 4.0
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 22/97 (22%)
Frame = +3

Query: 75 SESLLSSPTMALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVL- 251
S SL + +A V+ GDTL W+ + +S +TLEQLQ+ L P SA L
Sbjct: 1236 SSSLKAVLRLAGVYIWAFGDTLENWIDALDLSHTRVNITLEQLQS----LTPLPTSANLT 1291

Query: 252 ---------------------AFTYLDKDNDVVTLGD 299
+FT++ D +T+ D
Sbjct: 1292 HRLDDGTTTLKFTPASSYTFSSFTHISNDEQYLTIND 1328


>sp|Q88434|L_SV5 Large structural protein OS=Simian virus 5 (strain
W3) GN=L PE=3 SV=1
Length = 2255

Score = 31.2 bits (69), Expect = 4.0
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 22/97 (22%)
Frame = +3

Query: 75 SESLLSSPTMALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVL- 251
S SL + +A V+ GDTL W+ + +S +TLEQLQ+ L P SA L
Sbjct: 1236 SSSLKAVLRLAGVYIWAFGDTLENWIDALDLSHTRVNITLEQLQS----LTPLPTSANLT 1291

Query: 252 ---------------------AFTYLDKDNDVVTLGD 299
+FT++ D +T+ D
Sbjct: 1292 HRLDDGTTTLKFTPASSYTFSSFTHISNDEQYLTIND 1328


>sp|P75444|Y334_MYCPN Putative ABC transporter ATP-binding protein
MPN_334 OS=Mycoplasma pneumoniae GN=MPN_334 PE=3 SV=1
Length = 326

Score = 30.4 bits (67), Expect = 6.8
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Frame = +3

Query: 117 KVKHGDTLRRWVVSDSISAEMFPVT------LEQLQAK--VRELFQFPPSAVLAF 257
KV + D+LR+W+ + I+ + FP T L+Q Q+ EL+Q P V F
Sbjct: 236 KVNNSDSLRKWLKAQKIAYKYFPATDDFQVDLKQKQSNKFAVELYQQPDFEVFIF 290


>sp|Q9XW10|PAD1_CAEEL Protein pad-1 OS=Caenorhabditis elegans
GN=pad-1 PE=2 SV=2
Length = 2417

Score = 30.0 bits (66), Expect = 8.9
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Frame = +3

Query: 90 SSPTMALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQF----PPSAV--- 248
S PT+ + +T+ V + ++ + L QL ++L + PPS +
Sbjct: 541 SDPTIRTQHLPRLLETVLEGVSNKNLLSSCDQSDLLQLYTVCQKLLEISTAHPPSPIEVD 600

Query: 249 -LAFTYLDKDNDVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGS 389
+A L +V + +R DACL QCL+ L ++ ++ S
Sbjct: 601 EIAEDSLSMSQEVTAIEHERSQTDACLSQCLSALSAIFEIYTTRREAS 648


>sp|Q47WG1|LEUD_COLP3 3-isopropylmalate dehydratase small subunit
OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
GN=leuD PE=3 SV=1
Length = 198

Score = 30.0 bits (66), Expect = 8.9
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3

Query: 114 FKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVVTL 293
FKV + + I+ + P+ L + A++ +LF+ P+A L T +D N+VVT
Sbjct: 97 FKVIIASSFADIFYGNCINVGLLPIKLTE--AEIEQLFKLSPNAQLTLT-VDLPNNVVTC 153

Query: 294 GD 299
G+
Sbjct: 154 GE 155


>sp|Q54N87|Y6496_DICDI Putative uncharacterized protein DDB_G0285443
OS=Dictyostelium discoideum GN=DDB_G0285443 PE=4 SV=1
Length = 72

Score = 30.0 bits (66), Expect = 9.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1

Query: 106 LSFSRSSMETPSADGWFLTQSVQRCSQLHWSNCRP 210
L S SS+E S+ G F + Q HW++CRP
Sbjct: 15 LKSSVSSIENGSSSGSFGSNETSGWGQHHWNSCRP 49


tr_hit_id A9SHX9
Definition tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 88
Score (bit) 85.1
E-value 3.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963168|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_M23, 5'
(588 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella paten... 85 3e-15
tr|A9NT24|A9NT24_PICSI Putative uncharacterized protein OS=Picea... 80 6e-14
tr|A9NP76|A9NP76_PICSI Putative uncharacterized protein OS=Picea... 79 1e-13
tr|B8K1X5|B8K1X5_WHEAT Ubiquitin-associated protein OS=Triticum ... 77 5e-13
tr|Q7XK43|Q7XK43_ORYSJ Os04g0476800 protein OS=Oryza sativa subs... 74 6e-12
tr|Q01JY6|Q01JY6_ORYSA OSIGBa0116M22.2 protein OS=Oryza sativa G... 74 6e-12
tr|B8AVG3|B8AVG3_ORYSI Putative uncharacterized protein OS=Oryza... 74 6e-12
tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subs... 74 8e-12
tr|A2X6P6|A2X6P6_ORYSI Putative uncharacterized protein OS=Oryza... 74 8e-12
tr|Q0ZII2|Q0ZII2_NICPL Joka2 (Fragment) OS=Nicotiana plumbaginif... 66 2e-09
tr|A9S1V5|A9S1V5_PHYPA Predicted protein OS=Physcomitrella paten... 58 4e-07
tr|Q9SB64|Q9SB64_ARATH Putative uncharacterized protein AT4g2469... 52 3e-05
tr|A5ADS2|A5ADS2_VITVI Putative uncharacterized protein OS=Vitis... 51 4e-05
tr|A0C582|A0C582_PARTE Chromosome undetermined scaffold_15, whol... 37 0.63
tr|Q14VK1|Q14VK1_9VIRU ORF129 OS=Ranid herpesvirus 1 PE=4 SV=1 37 1.1
tr|Q55CE3|Q55CE3_DICDI ZZ-type Zn finger-containing protein OS=D... 37 1.1
tr|A8N2P6|A8N2P6_COPC7 Predicted protein OS=Coprinopsis cinerea ... 37 1.1
tr|B6NHG6|B6NHG6_BRAFL Putative uncharacterized protein OS=Branc... 35 4.1
tr|Q39GN9|Q39GN9_BURS3 ABC cobalamin/Fe3+-siderophore transporte... 34 7.0
tr|Q3XXI1|Q3XXI1_ENTFC Haloacid dehalogenase-like hydrolase:Cati... 34 7.0
tr|A0C9S2|A0C9S2_PARTE Chromosome undetermined scaffold_16, whol... 34 7.0
tr|A7EUB6|A7EUB6_SCLS1 Putative uncharacterized protein OS=Scler... 34 7.0
tr|Q4DEU7|Q4DEU7_TRYCR Putative uncharacterized protein OS=Trypa... 33 9.1
tr|Q16T71|Q16T71_AEDAE Putative uncharacterized protein OS=Aedes... 33 9.1

>tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_212537 PE=4 SV=1
Length = 732

Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/88 (47%), Positives = 55/88 (62%)
Frame = +3

Query: 111 VFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVVT 290
VFK+KHGD +RR+ V S+ + QL+ +R+ F+ P S+ L Y DKD DVVT
Sbjct: 5 VFKIKHGDVVRRFTVQPSVPGGGPDMNFSQLEDTIRQAFKLPASSDLVINYNDKDGDVVT 64

Query: 291 LGDDRDLVDACLVQCLNPLRLEVQVLES 374
+ D DL DAC++Q LNPLRL V ES
Sbjct: 65 MAGDHDLYDACVIQELNPLRLTVTAHES 92


>tr|A9NT24|A9NT24_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 174

Score = 80.5 bits (197), Expect = 6e-14
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Frame = +3

Query: 102 MALVFKVKHGDTLRRWVVSDSISAEMFP-VTLEQLQAKVRELFQFPPSAVLAFTYLDKDN 278
MALV KVK+ LRR + + E P + ++ L+ K+RELF+ P+A ++ TY D+D
Sbjct: 1 MALVVKVKYQGILRRLTLQ--LREEYVPEINMDALKCKIRELFKLNPNADMSITYTDEDG 58

Query: 279 DVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPAD--NYNMEVFLKLL 446
DVVT+ DD D +DA + Q LNPLRL+V + SN S+R+ PA+ N ME L+ L
Sbjct: 59 DVVTMADDVDFLDA-VRQGLNPLRLDVSLATEPSN-SERSSTPAEQRNEGMEPLLEAL 114


>tr|A9NP76|A9NP76_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 174

Score = 79.3 bits (194), Expect = 1e-13
Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Frame = +3

Query: 102 MALVFKVKHGDTLRRWVVSDSISAEMFP-VTLEQLQAKVRELFQFPPSAVLAFTYLDKDN 278
M LV KVK+ LRR + + E P + ++ L+ K+RELF+ P+A ++ TY D+D
Sbjct: 1 MTLVVKVKYQGILRRLTLQ--LREEYVPEINMDALKCKIRELFKLNPNADMSITYTDEDG 58

Query: 279 DVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPAD--NYNMEVFLKLL 446
DVVT+ DD D +DA + Q LNPLRL+V + SN S+R+ PA+ N ME L+ L
Sbjct: 59 DVVTMADDVDFLDA-VRQGLNPLRLDVSLATEPSN-SERSSSPAEQRNEGMEPLLEAL 114


>tr|B8K1X5|B8K1X5_WHEAT Ubiquitin-associated protein OS=Triticum
aestivum GN=UBA PE=2 SV=1
Length = 870

Score = 77.4 bits (189), Expect = 5e-13
Identities = 41/94 (43%), Positives = 58/94 (61%)
Frame = +3

Query: 108 LVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 287
+V KVK+GDTL+R+ + ++ F + L L++K+ F+F P A TY D+D DVV
Sbjct: 21 VVVKVKYGDTLKRF--NGYVNGTHFTLNLSALRSKIASAFKFAPDADFILTYTDEDGDVV 78

Query: 288 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGS 389
L DD DL DA + Q LNPLR+ VQ+ S + S
Sbjct: 79 MLDDDEDLHDAAIHQKLNPLRINVQLKNSHAGAS 112


>tr|Q7XK43|Q7XK43_ORYSJ Os04g0476800 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0044K18.2 PE=4 SV=1
Length = 881

Score = 73.9 bits (180), Expect = 6e-12
Identities = 42/99 (42%), Positives = 58/99 (58%)
Frame = +3

Query: 108 LVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 287
LV KVK G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV
Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75

Query: 288 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 404
L DD DL DA + Q LNPLR+ V+ L+S S+G + Q
Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113


>tr|Q01JY6|Q01JY6_ORYSA OSIGBa0116M22.2 protein OS=Oryza sativa
GN=OSIGBa0116M22.2 PE=4 SV=1
Length = 881

Score = 73.9 bits (180), Expect = 6e-12
Identities = 42/99 (42%), Positives = 58/99 (58%)
Frame = +3

Query: 108 LVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 287
LV KVK G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV
Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75

Query: 288 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 404
L DD DL DA + Q LNPLR+ V+ L+S S+G + Q
Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113


>tr|B8AVG3|B8AVG3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_16310 PE=4 SV=1
Length = 881

Score = 73.9 bits (180), Expect = 6e-12
Identities = 42/99 (42%), Positives = 58/99 (58%)
Frame = +3

Query: 108 LVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 287
LV KVK G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV
Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75

Query: 288 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 404
L DD DL DA + Q LNPLR+ V+ L+S S+G + Q
Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113


>tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subsp.
japonica GN=OJ1067_B01.6-1 PE=2 SV=1
Length = 845

Score = 73.6 bits (179), Expect = 8e-12
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +3

Query: 78 ESLLSSPT-MALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLA 254
E L S P +V KVK+G+TL+R+ + F + L L++K+ F+F
Sbjct: 10 EGLASRPDEWDVVLKVKYGETLKRF--GGYVQGPQFSLNLSALRSKIASAFKFGSDVDFI 67

Query: 255 FTYLDKDNDVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPADN 416
TY D+D D+V L DD DL DA + Q LNPLR+ VQ+ S + Q +DN
Sbjct: 68 LTYTDEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLNNSHTAAPQAKQQDSDN 121


>tr|A2X6P6|A2X6P6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_07886 PE=4 SV=1
Length = 845

Score = 73.6 bits (179), Expect = 8e-12
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +3

Query: 78 ESLLSSPT-MALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLA 254
E L S P +V KVK+G+TL+R+ + F + L L++K+ F+F
Sbjct: 10 EGLASRPDEWDVVLKVKYGETLKRF--GGYVQGPQFSLNLSALRSKIASAFKFGSDVDFI 67

Query: 255 FTYLDKDNDVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPADN 416
TY D+D D+V L DD DL DA + Q LNPLR+ VQ+ S + Q +DN
Sbjct: 68 LTYTDEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLNNSHTAAPQAKQQDSDN 121


>tr|Q0ZII2|Q0ZII2_NICPL Joka2 (Fragment) OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 467

Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/102 (39%), Positives = 62/102 (60%)
Frame = +3

Query: 105 ALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDV 284
A+V KVK+ +TLRR+ + + E + ++ L K+ +LF A L TY+D+D DV
Sbjct: 1 AIVIKVKYEETLRRF--NARVINEKLDLNMDGLSDKIFQLFNIARDAELILTYVDEDGDV 58

Query: 285 VTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPA 410
VTL DD DL D + Q LNPLR+ V++ N ++R+ +P+
Sbjct: 59 VTLVDDEDLQDV-MRQDLNPLRISVRL-----NAAERSSRPS 94