DK963174
Clone id TST39A01NGRL0015_N05
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_N05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGCGATGAAGAAGACCTTCACAGAGGAAG
AGCTCGAAGAAGTAAGCGACGATGAACTAGGAGGGCAGCTGCCACCTGAGGAGGAGAATG
GAGCAAAGAAACGAGGTGCCAGGTATTTGGATGATGATGCAAATTCTGATGAAGAATTTC
CGGAGGTTTTAACCATGATAGAGGGCAAGAGCAAGGCTCAACAGCTCAGAAGTGAAGAGA
GAGCAAATGAGAGAAGGATTGCAGCAGAGGCGAAAAAAAAGGTACGGGAAAGGGCAGCTG
CAAGGAAAAGTGAGAAAGCATCTGGGGATGAGGGATTGAGTCCTCTGGACGAGCCGAAGG
CGGAAAAGGAGGATACACAAACAGCACAGAGAGATGACCTGCTTGATGACAGCGTAGTAC
AGTTCTTGACTGCACGCGAAAGGGCTGAGACTGAAGGTAATGTGGAGCCTTCTCCACCCA
AGGAACTGATTAAGAAAAAGCGGTTGAAGTCTAAGACAGATCTGAGCAATG
■■Homology search results ■■ -
sp_hit_id Q6ZVE7
Definition sp|Q6ZVE7|GOT1A_HUMAN Vesicle transport protein GOT1A OS=Homo sapiens
Align length 64
Score (bit) 30.4
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963174|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_N05, 5'
(531 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZVE7|GOT1A_HUMAN Vesicle transport protein GOT1A OS=Homo sa... 30 5.5

>sp|Q6ZVE7|GOT1A_HUMAN Vesicle transport protein GOT1A OS=Homo
sapiens GN=GOLT1A PE=2 SV=1
Length = 132

Score = 30.4 bits (67), Expect = 5.5
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -2

Query: 236 FTSELLSLALALYHG*NLRKFFXXXXXXXXIPGTSFLCS---ILLLRWQLPS*FIVAY-F 69
F + L L+L G LRK F + GTSFL I+LLRW L F+ Y F
Sbjct: 37 FGNLLFLTGLSLIIG--LRKTFWFFFQRHKLKGTSFLLGGVVIVLLRWPLLGMFLETYGF 94

Query: 68 FELF 57
F LF
Sbjct: 95 FSLF 98


tr_hit_id A6C502
Definition tr|A6C502|A6C502_9PLAN Putative uncharacterized protein OS=Planctomyces maris DSM 8797
Align length 44
Score (bit) 35.8
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK963174|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_N05, 5'
(531 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6C502|A6C502_9PLAN Putative uncharacterized protein OS=Planc... 36 1.4
tr|Q4CS52|Q4CS52_TRYCR Mucin-associated surface protein (MASP), ... 35 1.8
tr|Q90YL2|Q90YL2_CHICK Cardiac muscle factor 1 (Fragment) OS=Gal... 27 3.8
tr|Q98940|Q98940_CHICK Cardiac muscle factor 1 CMF1 OS=Gallus ga... 27 3.8
tr|A2QWX4|A2QWX4_ASPNC Contig An11c0240, complete genome OS=Aspe... 34 4.0
tr|B0RC06|B0RC06_CLAMS Dihydrolipoamide succinyltransferase OS=C... 33 6.9

>tr|A6C502|A6C502_9PLAN Putative uncharacterized protein
OS=Planctomyces maris DSM 8797 GN=PM8797T_20753 PE=4
SV=1
Length = 312

Score = 35.8 bits (81), Expect = 1.4
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = -1

Query: 441 FRVQSRTVLRCHQAGHLSVLFVYPPFPPSARPEDSIPHPQMLSH 310
FR+Q + LR H A H S F YP PS P I HP +H
Sbjct: 20 FRIQGKERLRWHHATHYSRPFFYPLTGPSGIPLTRIGHPGAPNH 63


>tr|Q4CS52|Q4CS52_TRYCR Mucin-associated surface protein (MASP),
putative OS=Trypanosoma cruzi GN=Tc00.1047053510921.30
PE=4 SV=1
Length = 386

Score = 35.4 bits (80), Expect = 1.8
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3

Query: 330 EGLSPLDEPKAEKEDTQTAQRDDLLDDSVVQFL---TARERAETEGNVEPSPP 479
EG++ L+E K EKED +T + ++ L+D + T + TE EP PP
Sbjct: 199 EGINSLEETKNEKEDIKTPEAEESLEDPTKKLQGGETDPPASSTEKKPEPQPP 251


>tr|Q90YL2|Q90YL2_CHICK Cardiac muscle factor 1 (Fragment) OS=Gallus
gallus PE=4 SV=1
Length = 1625

Score = 27.3 bits (59), Expect(2) = 3.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3

Query: 357 KAEKEDTQTAQRDDLLDDSVVQFLTARERAET 452
K E+ + + ++ L+D+VVQ TA+ AET
Sbjct: 896 KVERLERELEMSEENLEDAVVQLATAKAEAET 927



Score = 26.2 bits (56), Expect(2) = 3.8
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Frame = +1

Query: 211 ARLNSSEVKREQMREGLQQ--------RRKKRYGKGQLQGKVRKHLGMRD 336
ARLNS++ + QMREG+++ RK R+ +L+ RK + D
Sbjct: 846 ARLNSAQKEVNQMREGMEKLKIKIESDERKTRHIAEKLKENERKSDALLD 895


>tr|Q98940|Q98940_CHICK Cardiac muscle factor 1 CMF1 OS=Gallus
gallus PE=2 SV=1
Length = 1538

Score = 27.3 bits (59), Expect(2) = 3.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3

Query: 357 KAEKEDTQTAQRDDLLDDSVVQFLTARERAET 452
K E+ + + ++ L+D+VVQ TA+ AET
Sbjct: 881 KVERLERELEMSEENLEDAVVQLATAKAEAET 912



Score = 26.2 bits (56), Expect(2) = 3.8
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Frame = +1

Query: 211 ARLNSSEVKREQMREGLQQ--------RRKKRYGKGQLQGKVRKHLGMRD 336
ARLNS++ + QMREG+++ RK R+ +L+ RK + D
Sbjct: 831 ARLNSAQKEVNQMREGMEKLKIKIESDERKTRHIAEKLKENERKSDALLD 880


>tr|A2QWX4|A2QWX4_ASPNC Contig An11c0240, complete genome
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=An11g06790 PE=4 SV=1
Length = 394

Score = 34.3 bits (77), Expect = 4.0
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3

Query: 342 PLDEPKAEKEDTQTAQRDDLLDDSVVQFLTARERAETEGNVEPSP 476
P + A E QT DDL DD +V A ++ + E + EPSP
Sbjct: 4 PTSDAPAMDEFAQTRGGDDLFDDEIVPVPAAEQQPQPEVHAEPSP 48


>tr|B0RC06|B0RC06_CLAMS Dihydrolipoamide succinyltransferase
OS=Clavibacter michiganensis subsp. sepedonicus (strain
ATCC 33113 / JCM 9667) GN=sucB PE=3 SV=1
Length = 482

Score = 33.5 bits (75), Expect = 6.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3

Query: 333 GLSPLDEPKAEKEDTQTAQRDDLLDDSVVQFLTARERAETEGNVEPSP 476
G +P +EP AE+ D+ ++D+V+ A + AE VEP P
Sbjct: 83 GDAPAEEPAAEQAAEPEPAADEAVEDTVIPSTEAEDDAEAPAPVEPEP 130