DK963194 |
Clone id |
TST39A01NGRL0015_O02 |
Library |
TST39 |
Length |
627 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_O02. 5' end sequence. |
Accession |
DK963194 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3536Contig1 |
Sequence |
GACGATTTCTCTGCCTTCGGGGCAGCAATCACTGTTTCTCATTGCACATATTTTGTTATG CTGTGTTGACCCGATCTATCTGTACATACACAGAAGGAGAGCAGCGATAGAGTGAACGAC AACGAGAAGTAGGGCAATTAACGATGATTCCCACCAGGCAGTCCCCAAAGCCCATGAACT CCATTAACTCCCTCCCCCCTTACCTTCAGACTTTCTCCCCCAGCGCTGGCCACTCCCCTC ACCATCGCTCCTCTTCTTCAAGTGCCTCCGAGCTGGACAAATATCTCTCCGAACTATTAA CTGAACGTCAAAAGTTGGGTCCTTTCATGCAAGTGCTACCCAATTGCAGCAGGCTTTTAA ACCAAGAGATCATGAGATTAACAAGTCTAGTGGGGACAACTTCATACGGTGAACATGATT CTATAGAGCATGGCAGCCTCCTTTCATCTGGGGGTATGATGTCAAATGGAGTGGGACTCG ATTCAAATGGCTGGTCTTCCTTCCAATCAGAGAGGCTGGTGTCTGCCATGTCATGGCGTG GTTTACCTGGAGGTTCCCCAGGTCCTGTTATTAAAAAGATCATACGAATTGAAGTACCTG TAGACAAGTACCCCACGTTCAACTTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZVI3 |
Definition |
sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana |
Align length |
122 |
Score (bit) |
102.0 |
E-value |
2.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLA9 |
Definition |
tr|B8LLA9|B8LLA9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
120 |
Score (bit) |
130.0 |
E-value |
5.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963194|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_O02, 5' (608 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LLA9|B8LLA9_PICSI Putative uncharacterized protein OS=Picea... 130 5e-29 tr|A9TGK8|A9TGK8_PHYPA Predicted protein OS=Physcomitrella paten... 122 1e-26 tr|A9SDR7|A9SDR7_PHYPA Predicted protein OS=Physcomitrella paten... 122 2e-26 tr|A9NYT0|A9NYT0_PICSI Putative uncharacterized protein OS=Picea... 120 6e-26 tr|A9TN02|A9TN02_PHYPA Predicted protein OS=Physcomitrella paten... 119 1e-25 tr|Q5N8G9|Q5N8G9_ORYSJ cDNA clone:J013001M07, full insert sequen... 113 7e-24 tr|A3B446|A3B446_ORYSJ Putative uncharacterized protein OS=Oryza... 113 7e-24 tr|A2WXQ7|A2WXQ7_ORYSI Putative uncharacterized protein OS=Oryza... 113 7e-24 tr|Q60DW1|Q60DW1_ORYSJ Os05g0419500 protein OS=Oryza sativa subs... 113 1e-23 tr|B8AYB7|B8AYB7_ORYSI Putative uncharacterized protein OS=Oryza... 113 1e-23 tr|B4FCM9|B4FCM9_MAIZE Putative uncharacterized protein OS=Zea m... 109 1e-22 tr|B4FZJ8|B4FZJ8_MAIZE Putative uncharacterized protein OS=Zea m... 107 4e-22 tr|A7Q9W1|A7Q9W1_VITVI Chromosome chr8 scaffold_68, whole genome... 105 2e-21 tr|B7FAH5|B7FAH5_ORYSJ cDNA, clone: J100073F21, full insert sequ... 105 3e-21 tr|A2X931|A2X931_ORYSI Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|Q6Z5M7|Q6Z5M7_ORYSJ Putative KH domain protein OS=Oryza sativ... 103 1e-20 tr|A3AAV2|A3AAV2_ORYSJ Putative uncharacterized protein OS=Oryza... 103 1e-20 tr|A5BT30|A5BT30_VITVI Putative uncharacterized protein OS=Vitis... 102 1e-20 tr|A9PGS1|A9PGS1_POPTR Putative uncharacterized protein OS=Popul... 101 4e-20 tr|B6TF49|B6TF49_MAIZE Nucleic acid binding protein OS=Zea mays ... 100 5e-20 tr|B4FU04|B4FU04_MAIZE Putative uncharacterized protein OS=Zea m... 100 5e-20 tr|B4F808|B4F808_MAIZE Putative uncharacterized protein OS=Zea m... 100 9e-20 tr|A7NXY9|A7NXY9_VITVI Chromosome chr6 scaffold_3, whole genome ... 99 1e-19 tr|Q75GR5|Q75GR5_ORYSJ Os03g0815700 protein OS=Oryza sativa subs... 99 2e-19 tr|B8AM97|B8AM97_ORYSI Putative uncharacterized protein OS=Oryza... 99 2e-19 tr|Q0DY06|Q0DY06_ORYSJ Os02g0722700 protein OS=Oryza sativa subs... 98 3e-19 tr|B4FN92|B4FN92_MAIZE Nucleic acid binding protein OS=Zea mays ... 98 3e-19 tr|A5BIR0|A5BIR0_VITVI Putative uncharacterized protein OS=Vitis... 98 4e-19 tr|B4FNZ8|B4FNZ8_MAIZE Putative uncharacterized protein OS=Zea m... 97 6e-19 tr|Q8H2M0|Q8H2M0_ORYSJ Os07g0227400 protein OS=Oryza sativa subs... 97 7e-19
>tr|B8LLA9|B8LLA9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 289
Score = 130 bits (328), Expect = 5e-29 Identities = 62/120 (51%), Positives = 76/120 (63%), Gaps = 4/120 (3%) Frame = +2
Query: 260 KYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXXXXX 439 +YL+ELL ERQKL PFMQVLPNCSRLLNQEI+R T +V +G+HD +EH Sbjct: 38 RYLAELLAERQKLSPFMQVLPNCSRLLNQEIIRTTGMVSNQGFGDHDRLEHSGPLASAGL 97
Query: 440 XXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPTFNF 607 D GW QSERL S+M W G PG PV+KK++R+++PVD YP FNF Sbjct: 98 ISNGSGMDLGGWGGLQSERLGISQASSMGWHGAPGVPISPVVKKLMRLDIPVDNYPNFNF 157
>tr|A9TGK8|A9TGK8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222121 PE=4 SV=1 Length = 276
Score = 122 bits (307), Expect = 1e-26 Identities = 63/118 (53%), Positives = 75/118 (63%), Gaps = 1/118 (0%) Frame = +2
Query: 257 DKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXXXX 436 DKYLSELL ERQ L PFMQVLPNCSRLLNQEIMR+T+LVG Y + D ++H Sbjct: 30 DKYLSELLAERQNLCPFMQVLPNCSRLLNQEIMRVTTLVGKLPYLDQDGLDHRSPLPVGT 89
Query: 437 XXXXXXXXDSNGWSSFQSERLV-SAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPTFNF 607 D NGW ERLV + W G PG S G ++KK RI++P+DKYP +NF Sbjct: 90 PLNDGGSGDLNGW----GERLVIPQVGWHGTPGASAGLILKKTQRIDIPIDKYPNYNF 143
>tr|A9SDR7|A9SDR7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_183867 PE=4 SV=1 Length = 278
Score = 122 bits (306), Expect = 2e-26 Identities = 65/122 (53%), Positives = 79/122 (64%), Gaps = 3/122 (2%) Frame = +2
Query: 251 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIE--HXXXX 424 E DKYLSELL ERQ LGPFMQVLPNCSRLLNQEI+R+T+LVG +S+ + D +E H Sbjct: 28 EHDKYLSELLAERQNLGPFMQVLPNCSRLLNQEIVRVTALVGNSSFLDQDGLEHGHGSPL 87
Query: 425 XXXXXXXXXXXXDSNGWSSFQSERL-VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPTF 601 D NGW +RL + SW G PG GP++K+ RI+VPVDKYP + Sbjct: 88 SSGILLNNGGSGDLNGW----GDRLGLPQSSWHGTPGTLAGPIVKRTQRIDVPVDKYPNY 143
Query: 602 NF 607 NF Sbjct: 144 NF 145
>tr|A9NYT0|A9NYT0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 294
Score = 120 bits (301), Expect = 6e-26 Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 5/121 (4%) Frame = +2
Query: 260 KYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEH-XXXXXXXX 436 +YL+ELL ERQKLGPFMQVLP CSRLLNQEI+RL++LV + +HD ++H Sbjct: 42 RYLTELLAERQKLGPFMQVLPICSRLLNQEIVRLSTLVSNQGFVDHDRLDHGSPMASAGL 101
Query: 437 XXXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPTFN 604 D GWS Q+ER+ ++M W G P GS PVIK ++R++VP DK+P FN Sbjct: 102 LSNGGTMMDLGGWSGLQTERMSISQATSMGWHGAPAGSINPVIKTVLRMDVPADKFPHFN 161
Query: 605 F 607 F Sbjct: 162 F 162
>tr|A9TN02|A9TN02_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108452 PE=4 SV=1 Length = 278
Score = 119 bits (299), Expect = 1e-25 Identities = 60/117 (51%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Frame = +2
Query: 260 KYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXXXXX 439 KYLSELL ERQ LGPFMQVLPNCSRLL+QEI+R+T+LVG +S+ + D ++H Sbjct: 33 KYLSELLAERQNLGPFMQVLPNCSRLLSQEIVRVTALVGNSSFLDQDGVDHGSPLSLGTR 92
Query: 440 XXXXXXXDSNGWSSFQSERL-VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPTFNF 607 D NGW +RL +S W G P GP++K+ RI+VPVDK+P FNF Sbjct: 93 INNGGSGDLNGW----GDRLGLSQSGWHGTPATPAGPIVKRTQRIDVPVDKFPNFNF 145
>tr|Q5N8G9|Q5N8G9_ORYSJ cDNA clone:J013001M07, full insert sequence OS=Oryza sativa subsp. japonica GN=P0408G07.28-1 PE=2 SV=1 Length = 290
Score = 113 bits (283), Expect = 7e-24 Identities = 56/123 (45%), Positives = 77/123 (62%), Gaps = 4/123 (3%) Frame = +2
Query: 251 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 430 E ++YL+ELL ERQKL PF+QVLP C+RLLNQEI+R +SL ++ + + IEH Sbjct: 34 ERERYLAELLAERQKLAPFVQVLPFCTRLLNQEILRASSLPPNHNFVDPERIEHGSPLRL 93
Query: 431 XXXXXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPT 598 D GWS Q+E + S+M W G P + PV+KK++R++VPVDKYP Sbjct: 94 PGLPVNGQPMDLEGWSGMQTENMRVLQASSMGWNGPPAITGTPVVKKVVRLDVPVDKYPN 153
Query: 599 FNF 607 +NF Sbjct: 154 YNF 156
>tr|A3B446|A3B446_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017818 PE=4 SV=1 Length = 296
Score = 113 bits (283), Expect = 7e-24 Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 4/123 (3%) Frame = +2
Query: 251 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 430 E ++YL+ELL ERQKL PFMQVLP C+RLLNQEI+R +SL ++ E + + H Sbjct: 34 ERERYLAELLAERQKLAPFMQVLPFCNRLLNQEILRASSLPPNPNFVEPERVNHGSPLRL 93
Query: 431 XXXXXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPT 598 D GWS Q+E++ +M W PG + PV+KK++RI+VPVDKYP Sbjct: 94 TGHPMNGQPMDLEGWSGMQTEQMGVLQSPSMGWNVAPGVAGSPVVKKVVRIDVPVDKYPN 153
Query: 599 FNF 607 +NF Sbjct: 154 YNF 156
>tr|A2WXQ7|A2WXQ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04709 PE=4 SV=1 Length = 290
Score = 113 bits (283), Expect = 7e-24 Identities = 56/123 (45%), Positives = 77/123 (62%), Gaps = 4/123 (3%) Frame = +2
Query: 251 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 430 E ++YL+ELL ERQKL PF+QVLP C+RLLNQEI+R +SL ++ + + IEH Sbjct: 34 ERERYLAELLAERQKLAPFVQVLPFCTRLLNQEILRASSLPPNHNFVDPERIEHGSPLRL 93
Query: 431 XXXXXXXXXXDSNGWSSFQSERL----VSAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPT 598 D GWS Q+E + S+M W G P + PV+KK++R++VPVDKYP Sbjct: 94 PGLPVNGQPMDLEGWSGMQTENMRVLQASSMGWNGPPAITGTPVVKKVVRLDVPVDKYPN 153
Query: 599 FNF 607 +NF Sbjct: 154 YNF 156
>tr|Q60DW1|Q60DW1_ORYSJ Os05g0419500 protein OS=Oryza sativa subsp. japonica GN=P0426G01.11 PE=2 SV=1 Length = 291
Score = 113 bits (282), Expect = 1e-23 Identities = 57/122 (46%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Frame = +2
Query: 251 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 430 E ++YL+ELL ERQKL PFMQVLP C+RLLNQEI+R +SL ++ E + + H Sbjct: 34 ERERYLAELLAERQKLAPFMQVLPFCNRLLNQEILRASSLPPNPNFVEPERVNHGSPLRL 93
Query: 431 XXXXXXXXXXDSNGWSSFQSERLV---SAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPTF 601 D GWS Q+E V +M W PG + PV+KK++RI+VPVDKYP + Sbjct: 94 TGHPMNGQPMDLEGWSGMQTEMGVLQSPSMGWNVAPGVAGSPVVKKVVRIDVPVDKYPNY 153
Query: 602 NF 607 NF Sbjct: 154 NF 155
>tr|B8AYB7|B8AYB7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19999 PE=4 SV=1 Length = 291
Score = 113 bits (282), Expect = 1e-23 Identities = 57/122 (46%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Frame = +2
Query: 251 ELDKYLSELLTERQKLGPFMQVLPNCSRLLNQEIMRLTSLVGTTSYGEHDSIEHXXXXXX 430 E ++YL+ELL ERQKL PFMQVLP C+RLLNQEI+R +SL ++ E + + H Sbjct: 34 ERERYLAELLAERQKLAPFMQVLPFCNRLLNQEILRASSLPPNPNFVEPERVNHGSPLRL 93
Query: 431 XXXXXXXXXXDSNGWSSFQSERLV---SAMSWRGLPGGSPGPVIKKIIRIEVPVDKYPTF 601 D GWS Q+E V +M W PG + PV+KK++RI+VPVDKYP + Sbjct: 94 TGHPMNGQPMDLEGWSGMQTEMGVLQSPSMGWNVAPGVAGSPVVKKVVRIDVPVDKYPNY 153
Query: 602 NF 607 NF Sbjct: 154 NF 155
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