DK963242 |
Clone id |
TST39A01NGRL0016_A04 |
Library |
TST39 |
Length |
654 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_A04. 5' end sequence. |
Accession |
DK963242 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL7Contig13 |
Sequence |
TCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACAAACTTGCAT AAGTCGAAGGCGCCAGCATCTGCTTTGCATTATATCTCACATTGACAGACAGATATGGCG CCGCTAGTGCGAGCAAGCATCCTTCTGGCAGCTCTGCTGATGGTGATGGCGGTAGGGGGC GAGGGTGCGTCGGCGCCCAAGGGCGTAACCCTCTCCTTCCCGCCCTTCACGTCGGCGATC AACTGCAGCATCGACGGAATGGCGGATACGCTGCTGACGCCGAGCGAGGTATGCAAATTG AGGGACGGAGGGAAGGAGGTGATACTGTCGTCGGACAATGTGGTGTCGGCAAGGTATCAG TACAAGAAGAAGTTGGAGTTGTGGAGGTCAAAGGACAAGTATGCGGCATCTTTCTCAACG GCCTACGTGGCGTCCTTTCTGAGGAGCTCGGACAGGGTGGAGATCGGCAACTTCAACTCC TTTGGGGGCGGGCTAGCCTTTGCGATAACTCCGGACCAAATGGTGGGCAGCAGCGGGCCG GAAAGCTTTGGCCTGTTCGAGATAGACCCCAAGACGGGGAAGTCGCTCCGTGGGAACAAG AGCAAAACAGTGGCAGTCGAAATCGACCTGTCGCGTGGAAGCTCCAGCGGCCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39529 |
Definition |
sp|Q39529|LEC2_CLALU Agglutinin-2 OS=Cladrastis lutea |
Align length |
95 |
Score (bit) |
36.2 |
E-value |
0.16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SGF7 |
Definition |
tr|A9SGF7|A9SGF7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
155 |
Score (bit) |
115.0 |
E-value |
2.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963242|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_A04, 5' (654 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SGF7|A9SGF7_PHYPA Predicted protein OS=Physcomitrella paten... 115 2e-24 tr|A9SGF3|A9SGF3_PHYPA Predicted protein OS=Physcomitrella paten... 115 2e-24 tr|A9RQP7|A9RQP7_PHYPA Predicted protein OS=Physcomitrella paten... 104 5e-21 tr|A9STE4|A9STE4_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.025 tr|Q852A9|Q852A9_ORYSJ Os03g0823000 protein OS=Oryza sativa subs... 42 0.033 tr|A2XNH7|A2XNH7_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.033 tr|Q9FG33|Q9FG33_ARATH Lectin-like protein kinase OS=Arabidopsis... 40 0.096 tr|Q6ZFS6|Q6ZFS6_ORYSJ Putative receptor-type protein kinase LRK... 39 0.28 tr|A3BP73|A3BP73_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.28 tr|Q7XUC6|Q7XUC6_ORYSJ OSJNBa0088A01.22 protein (Putative unchar... 39 0.37 tr|Q6ZFS5|Q6ZFS5_ORYSJ Putative receptor-type protein kinase LRK... 39 0.37 tr|A3BP74|A3BP74_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.37 tr|A2XWU3|A2XWU3_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.37 tr|Q743N5|Q743N5_MYCPA FadD17 OS=Mycobacterium paratuberculosis ... 38 0.62 tr|Q0S7K9|Q0S7K9_RHOSR Fatty-acid--CoA ligase OS=Rhodococcus sp.... 38 0.62 tr|A0QAJ2|A0QAJ2_MYCA1 Acyl-CoA synthase OS=Mycobacterium avium ... 38 0.62 tr|Q8W1R6|Q8W1R6_GRISI GSI-B4 isolectin (Fragment) OS=Griffonia ... 37 0.82 tr|B8BAE7|B8BAE7_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.82 tr|A7PNY6|A7PNY6_VITVI Chromosome chr8 scaffold_23, whole genome... 37 0.82 tr|Q6K6D7|Q6K6D7_ORYSJ Cell wall protein-like OS=Oryza sativa su... 36 1.8 tr|Q0JC36|Q0JC36_ORYSJ Os04g0494400 protein OS=Oryza sativa subs... 36 1.8 tr|Q9LYX1|Q9LYX1_ARATH Receptor like protein kinase (At5g03140) ... 36 1.8 tr|Q5ZEX3|Q5ZEX3_9FABA Lectin OS=Phaseolus microcarpus GN=lec PE... 36 1.8 tr|A7PT10|A7PT10_VITVI Chromosome chr8 scaffold_29, whole genome... 36 1.8 tr|Q84ZI6|Q84ZI6_ORYSJ Putative receptor-like protein kinase (Pu... 36 2.4 tr|Q5ZEX0|Q5ZEX0_9FABA Lectin OS=Phaseolus parvulus GN=lec PE=3 ... 36 2.4 tr|Q0J8A8|Q0J8A8_ORYSJ Os08g0124900 protein OS=Oryza sativa subs... 36 2.4 tr|B8B715|B8B715_ORYSI Putative uncharacterized protein OS=Oryza... 36 2.4 tr|A3BG87|A3BG87_ORYSJ Putative uncharacterized protein OS=Oryza... 36 2.4 tr|A8L0Y0|A8L0Y0_FRASN Putative uncharacterized protein OS=Frank... 35 3.1
>tr|A9SGF7|A9SGF7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_79086 PE=4 SV=1 Length = 297
Score = 115 bits (288), Expect = 2e-24 Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 3/155 (1%) Frame = +1
Query: 196 PKGVTLSFPPFTSAINCSIDGMADTLLTPSEVCKLRDGGKE--VILS-SDNVVSARYQYK 366 P V +S PPF + CSID P+ +C G +ILS D V+SARYQ+K Sbjct: 28 PPAVKISLPPFNNKFVCSID--PKVAADPNNICTPGVGFNPPALILSYDDTVISARYQHK 85
Query: 367 KKLELWRSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAITPDQMVGSSGPES 546 ++LW+ K+ ASF + +F R ++ F+ GGG+AFA+TP V +G ES Sbjct: 86 TPVQLWKRNSKFVASFKAFFTVNFNRDAEFTVRELFS--GGGIAFALTPSLSVAGTGAES 143
Query: 547 FGLFEIDPKTGKSLRGNKSKTVAVEIDLSRGSSSG 651 FGLF +D KTG SL G +KTVAVE+D+SR + G Sbjct: 144 FGLFPVDLKTGSSLNGKNTKTVAVELDISRVENDG 178
>tr|A9SGF3|A9SGF3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164759 PE=4 SV=1 Length = 323
Score = 115 bits (288), Expect = 2e-24 Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 3/155 (1%) Frame = +1
Query: 196 PKGVTLSFPPFTSAINCSIDGMADTLLTPSEVCKLRDGGKE--VILS-SDNVVSARYQYK 366 P V +S PPF + CSID P+ +C G +ILS D V+SARYQ+K Sbjct: 28 PPAVKISLPPFNNKFVCSID--PKVAADPNNICTPGVGFNPPALILSYDDTVISARYQHK 85
Query: 367 KKLELWRSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAITPDQMVGSSGPES 546 ++LW+ K+ ASF + +F R ++ F+ GGG+AFA+TP V +G ES Sbjct: 86 TPVQLWKRNSKFVASFKAFFTVNFNRDAEFTVRELFS--GGGIAFALTPSLSVAGTGAES 143
Query: 547 FGLFEIDPKTGKSLRGNKSKTVAVEIDLSRGSSSG 651 FGLF +D KTG SL G +KTVAVE+D+SR + G Sbjct: 144 FGLFPVDLKTGSSLNGKNTKTVAVELDISRVENDG 178
>tr|A9RQP7|A9RQP7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_69354 PE=4 SV=1 Length = 212
Score = 104 bits (259), Expect = 5e-21 Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 3/155 (1%) Frame = +1
Query: 196 PKGVTLSFPPFTSAINCSIDGMADTLLTPSEVCKLRDGGKEVILS---SDNVVSARYQYK 366 P+ V ++ PPF + CS+D + + P+ +C G +L D V+SAR Q+K Sbjct: 22 PRAVKIALPPFNNKFICSVD--PEVGVDPNIICTPGVGFNPPVLILSYDDTVISARCQHK 79
Query: 367 KKLELWRSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAITPDQMVGSSGPES 546 ++LW+ K+ SF + +F R + F+ GGGLAFA+TP V +G ES Sbjct: 80 TPVQLWKRNSKFVTSFKAFFTINFNRDVEFTVRELFS--GGGLAFALTPSLSVVGTGAES 137
Query: 547 FGLFEIDPKTGKSLRGNKSKTVAVEIDLSRGSSSG 651 FGLF +D TG SL G +KTVAVE+D+SR G Sbjct: 138 FGLFPVDLTTGSSLNGKVTKTVAVELDISRVEDHG 172
>tr|A9STE4|A9STE4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_215581 PE=4 SV=1 Length = 672
Score = 42.4 bits (98), Expect = 0.025 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 3/147 (2%) Frame = +1
Query: 199 KGVTLSFPPFTSAINCSIDGMADTLLTPSEVCKLRDGGKEVIL--SSDNVVSARYQ-YKK 369 K + SFP F S N + + PS G+ V+ N +S + Y++ Sbjct: 29 KTIEFSFPNFKSPENDGTINIPNATDVPS--------GRNVLFLPKEKNALSVGWVIYEE 80
Query: 370 KLELWRSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAITPDQMVGSSGPESF 549 K++ W + D AASFST + +F S G G GLAF ITPD +G + Sbjct: 81 KVQFWDNSDD-AASFSTEF--TFSTSGYNASTG-----GSGLAFLITPDFSIG----DIR 128
Query: 550 GLFEIDPKTGKSLRGNKSKTVAVEIDL 630 G I T + N+ +AVEID+ Sbjct: 129 GYLGIFSSTTNASTNNQK--IAVEIDV 153
>tr|Q852A9|Q852A9_ORYSJ Os03g0823000 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0081B07.16 PE=4 SV=1 Length = 701
Score = 42.0 bits (97), Expect = 0.033 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = +1
Query: 361 YKKKLELWRSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAITPDQMV-GSSG 537 Y K + L + AASFST +V + + ++ G GLAFA+ P V G+ Sbjct: 79 YPKPVSLRNASTGAAASFSTTFVFAIVPKYP-------DAHGHGLAFALAPSVAVPGAVA 131
Query: 538 PESFGLFEIDPKTGKSLRGNKSKTVAVEIDLSR 636 + GLF TG+ K+K VAVE+D +R Sbjct: 132 GKYLGLFNTSDSTGQI----KNKIVAVELDTAR 160
>tr|A2XNH7|A2XNH7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14117 PE=4 SV=1 Length = 701
Score = 42.0 bits (97), Expect = 0.033 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = +1
Query: 361 YKKKLELWRSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAITPDQMV-GSSG 537 Y K + L + AASFST +V + + ++ G GLAFA+ P V G+ Sbjct: 79 YPKPVSLRNASTGAAASFSTTFVFAIVPKYP-------DAHGHGLAFALAPSVAVPGAVA 131
Query: 538 PESFGLFEIDPKTGKSLRGNKSKTVAVEIDLSR 636 + GLF TG+ K+K VAVE+D +R Sbjct: 132 GKYLGLFNTSDSTGQI----KNKIVAVELDTAR 160
>tr|Q9FG33|Q9FG33_ARATH Lectin-like protein kinase OS=Arabidopsis thaliana GN=At5g06740 PE=4 SV=1 Length = 652
Score = 40.4 bits (93), Expect = 0.096 Identities = 30/100 (30%), Positives = 50/100 (50%) Frame = +1
Query: 346 SARYQYKKKLELWRSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAITPDQMV 525 + R YKK LW SK K +A+F+T +V + +D G GLAF +TP++ Sbjct: 70 AGRALYKKPFRLW-SKHK-SATFNTTFVINISNKTD--------PGGEGLAFVLTPEE-- 117
Query: 526 GSSGPESFGLFEIDPKTGKSLRGNKSKTVAVEIDLSRGSS 645 + P++ + ++ R N+S+ V+VE D + S Sbjct: 118 --TAPQNSSGMWLGMVNERTNRNNESRIVSVEFDTRKSHS 155
>tr|Q6ZFS6|Q6ZFS6_ORYSJ Putative receptor-type protein kinase LRK1 OS=Oryza sativa subsp. japonica GN=OJ1499_A07.14 PE=4 SV=1 Length = 681
Score = 38.9 bits (89), Expect = 0.28 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 3/144 (2%) Frame = +1
Query: 205 VTLSFPPFTSAINCSIDGMADTLLTPSEVCKLRDGGKEVILSSDNVVSARYQYKKKLELW 384 ++ ++P F S+ N +ID ++ V D + N + R Y ++LW Sbjct: 10 LSFNYPTFASSDNQNIDIQGQASVSVGYV----DISANSVSGMGNS-AGRVVYAPPVQLW 64
Query: 385 RSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAIT--PDQM-VGSSGPESFGL 555 + ASF+T + + + SDR + G G+AF +T P ++ VG G E+ GL Sbjct: 65 DAATGEVASFTTRFSFNIIAPSDR------SKKGDGMAFFLTSYPSRLPVGHEGGENLGL 118
Query: 556 FEIDPKTGKSLRGNKSKTVAVEID 627 +T ++ +++ VAVE D Sbjct: 119 TN---QTVGNVSTGQNRFVAVEFD 139
>tr|A3BP73|A3BP73_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024845 PE=4 SV=1 Length = 659
Score = 38.9 bits (89), Expect = 0.28 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 3/144 (2%) Frame = +1
Query: 205 VTLSFPPFTSAINCSIDGMADTLLTPSEVCKLRDGGKEVILSSDNVVSARYQYKKKLELW 384 ++ ++P F S+ N +ID ++ V D + N + R Y ++LW Sbjct: 31 LSFNYPTFASSDNQNIDIQGQASVSVGYV----DISANSVSGMGNS-AGRVVYAPPVQLW 85
Query: 385 RSKDKYAASFSTAYVASFLRSSDRVEIGNFNSFGGGLAFAIT--PDQM-VGSSGPESFGL 555 + ASF+T + + + SDR + G G+AF +T P ++ VG G E+ GL Sbjct: 86 DAATGEVASFTTRFSFNIIAPSDR------SKKGDGMAFFLTSYPSRLPVGHEGGENLGL 139
Query: 556 FEIDPKTGKSLRGNKSKTVAVEID 627 +T ++ +++ VAVE D Sbjct: 140 TN---QTVGNVSTGQNRFVAVEFD 160
>tr|Q7XUC6|Q7XUC6_ORYSJ OSJNBa0088A01.22 protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0088A01.22 PE=4 SV=2 Length = 280
Score = 38.5 bits (88), Expect = 0.37 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Frame = +1
Query: 298 LRDGGKEVILSSDNVV--SARYQYKKK-LELWRSKDKYAASFSTAYVASFLRSSDRVEIG 468 + +G ++ LS+ N+ S R Y ++ L LW SK + ASF T +V + L + + Sbjct: 51 IANGSLQITLSTGNITNQSGRVCYTRETLRLWDSKKRTVASFRTEFVLNILPNQQQ---- 106
Query: 469 NFNSFGGGLAFAITPD--QMVGSSG 537 N G GLAF +T + GSSG Sbjct: 107 --NETGEGLAFILTSNLSSPRGSSG 129
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